Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc15g0003370 Simmondsia chinensis HOM05D006739 ORTHO05D008402 2.5e-94 350.5 241 100.0
EL10Ac1g00466 Beta vulgaris HOM05D006739 ORTHO05D008402 8.3e-37 159.5 219 56.2
Ah.05g171720 Amaranthus hybridus HOM05D006739 ORTHO05D008402 1.0e-34 152.5 220 53.6
Dinv44882 Davidia involucrata HOM05D006739 ORTHO05D008402 2.3e-34 151.4 253 62.5
Eucgr.F02164 Eucalyptus grandis HOM05D006739 ORTHO05D008402 3.9e-34 150.6 258 62.0
Ciclev10000605m.g Citrus clementina HOM05D006739 ORTHO05D008402 2.5e-33 147.9 257 60.3
Atru.chr13.953 Acer truncatum HOM05D006739 ORTHO05D008402 9.5e-33 146.0 167 51.5
CSS0036090 Camellia sinensis var. sinensis HOM05D006739 ORTHO05D008402 3.6e-32 144.1 178 47.8
RcHm_v2.0_Chr7g0233521 Rosa chinensis HOM05D006739 ORTHO05D008402 8.1e-32 142.9 213 55.9
QL12p039876 Quercus lobata HOM05D006739 ORTHO05D008402 2.3e-31 141.4 149 75.2
Hma1.2p1_0010F.1_g006410 Hydrangea macrophylla HOM05D006739 ORTHO05D008402 3.1e-31 141.0 220 55.9
CSS0033703 Camellia sinensis var. sinensis HOM05D006739 ORTHO05D008402 1.3e-29 135.6 222 55.0
MD08G1206600 Malus domestica HOM05D006739 ORTHO05D008402 1.3e-29 135.6 177 46.9
MD15G1390100 Malus domestica HOM05D006739 ORTHO05D008402 4.9e-29 133.7 177 46.9
Cfa013823 Carpinus fangiana HOM05D006739 ORTHO05D008402 8.3e-29 132.9 104 66.3
Nitab4.5_0002667g0060 Nicotiana tabacum HOM05D006739 ORTHO05D008402 1.1e-28 132.5 212 55.2
Haze_22495 Corylus avellana HOM05D006739 ORTHO05D008402 1.4e-28 132.1 104 65.4
CiPaw.08G057600 Carya illinoinensis HOM05D006739 ORTHO05D008402 3.5e-27 127.5 110 60.9
Nitab4.5_0002667g0050 Nicotiana tabacum HOM05D006739 ORTHO05D008402 3.5e-27 127.5 212 55.7
Manes.05G187600 Manihot esculenta HOM05D006739 ORTHO05D008402 6.6e-26 123.2 160 48.8
Migut.N00013 Erythranthe guttata HOM05D006739 ORTHO05D008402 8.6e-26 122.9 243 59.7
Sabra02G0086200 Salix brachista HOM05D006739 ORTHO05D008402 1.1e-25 122.5 165 46.7
FAN08G0673 Fragaria x ananassa HOM05D006739 ORTHO05D008402 1.9e-25 121.7 160 48.1
Hund26855 Selenicereus undatus HOM05D006739 ORTHO05D008402 2.5e-25 121.3 175 45.7
Potri.002G109500 Populus trichocarpa HOM05D006739 ORTHO05D008402 3.3e-25 120.9 155 49.0
MSTRG.24837 Avicennia marina HOM05D006739 ORTHO05D008402 7.3e-25 119.8 245 61.2
Lsat_1_v5_gn_1_781 Lactuca sativa HOM05D006739 ORTHO05D008402 7.3e-25 119.8 160 47.5
FvH4_5g34030 Fragaria vesca HOM05D006739 ORTHO05D008402 2.1e-24 118.2 160 46.9
FAN18G3137 Fragaria x ananassa HOM05D006739 ORTHO05D008402 2.1e-24 118.2 160 46.9
ECA247G1663 Erigeron canadensis HOM05D006739 ORTHO05D008402 3.6e-24 117.5 162 44.4
MBI16_g36544_MAGBIO Magnolia biondii HOM05D006739 ORTHO05D008402 3.6e-24 117.5 256 57.0
Hund26833 Selenicereus undatus HOM05D006739 ORTHO05D008402 6.2e-24 116.7 215 52.1
TWI56G0071 Tripterygium wilfordii HOM05D006739 ORTHO05D008402 6.2e-24 116.7 170 42.9
Prupe.1G539000 Prunus persica HOM05D006739 ORTHO05D008402 2.4e-23 114.8 169 44.4
Rhsim07G0214200 Rhododendron simsii HOM05D006739 ORTHO05D008402 6.8e-23 113.2 161 49.7
Phvul.009G145100 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 1.2e-22 112.5 142 49.3
TAR628G0153 Trochodendron aralioides HOM05D006739 ORTHO05D008402 1.2e-22 112.5 174 43.1
DCAR_019326 Daucus carota HOM05D006739 ORTHO05D008402 1.5e-22 112.1 177 40.1
VMungo1309G0048 Vigna mungo HOM05D006739 ORTHO05D008402 1.5e-22 112.1 142 48.6
Glyma.06G092600 Glycine max HOM05D006739 ORTHO05D008402 3.4e-22 110.9 191 57.1
Peaxi162Scf01212g00003 Petunia axillaris HOM05D006739 ORTHO05D008402 3.4e-22 110.9 152 42.8
AUR62014385 Chenopodium quinoa HOM05D006739 ORTHO05D008402 4.4e-22 110.5 176 55.7
Glyma.04G090900 Glycine max HOM05D006739 ORTHO05D008402 7.6e-22 109.8 149 47.0
Hund26854 Selenicereus undatus HOM05D006739 ORTHO05D008402 7.6e-22 109.8 165 42.4
TAR152G0001 Trochodendron aralioides HOM05D006739 ORTHO05D008402 7.6e-22 109.8 149 58.4
Duzib093G0111 Durio zibethinus HOM05D006739 ORTHO05D008402 9.9e-22 109.4 214 50.9
AUR62019126 Chenopodium quinoa HOM05D006739 ORTHO05D008402 1.3e-21 109.0 131 67.9
Aa31LG1G4990 Aethionema arabicum HOM05D006739 ORTHO05D008402 1.7e-21 108.6 192 53.6
Oeu020282.1 Olea europaea HOM05D006739 ORTHO05D008402 1.7e-21 108.6 142 82.4
THA.LOC104816789 Tarenaya hassleriana HOM05D006739 ORTHO05D008402 1.7e-21 108.6 188 66.5
vmacro04630 Vaccinium macrocarpon HOM05D006739 ORTHO05D008402 1.4e-20 105.5 163 43.6
Phvul.008G184000 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 4.2e-20 104.0 109 52.3
ClCG08G011830 Citrullus lanatus HOM05D006739 ORTHO05D008402 5.4e-20 103.6 90 61.1
PSO761G0270 Papaver somniferum HOM05D006739 ORTHO05D008402 5.4e-20 103.6 244 57.4
Glyma.14G184200 Glycine max HOM05D006739 ORTHO05D008402 9.3e-20 102.8 99 55.6
PGSC0003DMG400014713 Solanum tuberosum HOM05D006739 ORTHO05D008402 9.3e-20 102.8 130 71.5
PGSC0003DMG400027357 Solanum tuberosum HOM05D006739 ORTHO05D008402 9.3e-20 102.8 130 71.5
Sopen06g003030 Solanum pennellii HOM05D006739 ORTHO05D008402 1.2e-19 102.4 130 71.5
Glyma.02G216900 Glycine max HOM05D006739 ORTHO05D008402 1.6e-19 102.1 98 55.1
Hund26853 Selenicereus undatus HOM05D006739 ORTHO05D008402 1.6e-19 102.1 160 41.9
Actinidia10267 Actinidia chinensis HOM05D006739 ORTHO05D008402 2.7e-19 101.3 139 44.6
Aqoxy5G01872 Aquilegia oxysepala HOM05D006739 ORTHO05D008402 3.5e-19 100.9 137 81.8
Phvul.008G183900 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 3.5e-19 100.9 106 54.7
PGR042G0142 Punica granatum HOM05D006739 ORTHO05D008402 4.6e-19 100.5 140 81.4
Carub.0001s0928 Capsella rubella HOM05D006739 ORTHO05D008402 6.0e-19 100.1 152 60.5
Gorai.010G032500 Gossypium raimondii HOM05D006739 ORTHO05D008402 6.0e-19 100.1 241 56.4
Sp1g08530 Schrenkiella parvula HOM05D006739 ORTHO05D008402 7.8e-19 99.8 99 54.5
Sed0004950 Sechium edule HOM05D006739 ORTHO05D008402 7.8e-19 99.8 87 60.9
AL1G20500 Arabidopsis lyrata HOM05D006739 ORTHO05D008402 1.0e-18 99.4 215 49.3
COL.COLO4_35303 Corchorus olitorius HOM05D006739 ORTHO05D008402 1.0e-18 99.4 150 43.3
Thecc.08G075400 Theobroma cacao HOM05D006739 ORTHO05D008402 1.0e-18 99.4 212 50.5
AT1G09900 Arabidopsis thaliana HOM05D006739 ORTHO05D008402 1.3e-18 99.0 145 62.8
Gohir.A06G030375 Gossypium hirsutum HOM05D006739 ORTHO05D008402 1.3e-18 99.0 241 56.0
PSO700G0042 Papaver somniferum HOM05D006739 ORTHO05D008402 1.7e-18 98.6 167 71.3
Duzib116G0618 Durio zibethinus HOM05D006739 ORTHO05D008402 3.9e-18 97.4 156 41.0
HanXRQChr11g0324241 Helianthus annuus HOM05D006739 ORTHO05D008402 5.1e-18 97.1 60 71.7
VMungo0647G1229 Vigna mungo HOM05D006739 ORTHO05D008402 6.6e-18 96.7 105 49.5
DCAR_012846 Daucus carota HOM05D006739 ORTHO05D008402 8.7e-18 96.3 173 37.6
CARHR009960 Cardamine hirsuta HOM05D006739 ORTHO05D008402 1.1e-17 95.9 91 56.0
VMungo0647G0534 Vigna mungo HOM05D006739 ORTHO05D008402 1.5e-17 95.5 108 48.1
ATR0800G015 Amborella trichopoda HOM05D006739 ORTHO05D008402 5.6e-17 93.6 100 76.0
C05p08020 Brassica napus HOM05D006739 ORTHO05D008402 5.6e-17 93.6 214 46.3
Lj1g0027306 Lotus japonicus HOM05D006739 ORTHO05D008402 5.6e-17 93.6 138 43.5
Actinidia19611 Actinidia chinensis HOM05D006739 ORTHO05D008402 7.3e-17 93.2 156 40.4
MELO3C011106.2 Cucumis melo HOM05D006739 ORTHO05D008402 7.3e-17 93.2 90 56.7
Gohir.D06G029600 Gossypium hirsutum HOM05D006739 ORTHO05D008402 7.3e-17 93.2 190 65.3
CsaV3_2G030450 Cucumis sativus L. HOM05D006739 ORTHO05D008402 1.6e-16 92.0 92 55.4
BcaC05g24834 Brassica carinata HOM05D006739 ORTHO05D008402 4.8e-16 90.5 139 64.0
A06p06610 Brassica napus HOM05D006739 ORTHO05D008402 6.2e-16 90.1 79 54.4
BraA06t23875Z Brassica rapa HOM05D006739 ORTHO05D008402 1.1e-15 89.4 79 54.4
BolC5t29554H Brassica oleracea HOM05D006739 ORTHO05D008402 1.8e-15 88.6 79 54.4
SalBow5G4649 Salvia bowleyana HOM05D006739 ORTHO05D008402 1.8e-15 88.6 54 77.8
CAN.G941.26 Capsicum annuum HOM05D006739 ORTHO05D008402 2.4e-15 88.2 96 83.3
CDE07G2071 Ceratophyllum demersum HOM05D006739 ORTHO05D008402 5.3e-15 87.0 162 37.7
arahy.Tifrunner.gnm1.ann1.CH37P4 Arachis hypogaea HOM05D006739 ORTHO05D008402 6.9e-15 86.7 112 46.4
TAR381G0861 Trochodendron aralioides HOM05D006739 ORTHO05D008402 6.9e-15 86.7 190 36.3
Hund26842 Selenicereus undatus HOM05D006739 ORTHO05D008402 2.6e-14 84.7 148 60.1
arahy.Tifrunner.gnm1.ann1.M3C1JT Arachis hypogaea HOM05D006739 ORTHO05D008402 2.2e-13 81.6 104 46.2
Ca_05489_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 3.8e-13 80.9 101 45.5
Ca_29619_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 3.8e-13 80.9 101 45.5
Cc10_g08260 Coffea canephora HOM05D008425 ORTHO05D010555 3.5e-11 74.3 74 77.0
CDE04G0064 Ceratophyllum demersum HOM05D006739 ORTHO05D008402 7.8e-11 73.2 100 47.0
CDE06G1140 Ceratophyllum demersum HOM05D002753 ORTHO05D003097 1.0e-10 72.8 99 46.5
Oeu012210.1 Olea europaea HOM05D006739 ORTHO05D008402 2.3e-10 71.6 74 74.3
SGA_v2.0_scaffold123G33426 Striga asiatica HOM05D006739 ORTHO05D008402 3.9e-10 70.9 43 74.4
Ca_15539_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 8.7e-10 69.7 51 58.8
Actinidia19612 Actinidia chinensis HOM05D006739 ORTHO05D008402 7.3e-09 66.6 74 73.0
CANSAT25G1844 Cannabis sativa HOM05D006739 ORTHO05D008402 3.6e-08 64.3 92 43.5
Dinv22007 Davidia involucrata HOM05D006739 ORTHO05D008402 8.1e-08 63.2 30 86.7
TPR.G15758 Trifolium pratense HOM05D000069 ORTHO05D001849 1.1e-07 62.8 60 48.3
MBI16_g14339_MAGBIO Magnolia biondii HOM05D006739 ORTHO05D008402 3.1e-07 61.2 109 77.1
Psat5g018720 Pisum sativum HOM05D006739 ORTHO05D008402 3.1e-07 61.2 86 44.2
HPP92_004375 Vanilla planifolia HOM05D006739 ORTHO05D008402 1.5e-06 58.9 53 56.6
Lalb_Chr08g0242631 Lupinus albus HOM05D006739 ORTHO05D008402 3.4e-06 57.8 34 79.4


User provided reference genes

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