Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc15g0002750 Simmondsia chinensis HOM05D007226 ORTHO05D009160 9.1e-119 430.3 218 100.0
Ah.05g171090 Amaranthus hybridus HOM05D007226 ORTHO05D009160 3.0e-53 212.6 250 48.0
VMungo0251G0617 Vigna mungo HOM05D007226 ORTHO05D009160 7.1e-47 191.4 150 58.7
Potri.015G121101 Populus trichocarpa HOM05D007226 ORTHO05D009160 4.6e-46 188.7 125 68.0
Duzib192G0307 Durio zibethinus HOM05D007226 ORTHO05D009160 6.0e-46 188.3 124 66.1
Thecc.06G141800 Theobroma cacao HOM05D007226 ORTHO05D009160 1.3e-45 187.2 124 64.5
AL8G14200 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 3.0e-45 186.0 130 63.1
QL11p017833 Quercus lobata HOM05D007226 ORTHO05D009160 3.0e-45 186.0 107 73.8
AL8G14380 Arabidopsis lyrata HOM05D007226 ORTHO05D009160 3.9e-45 185.7 130 63.1
C02p45740 Brassica napus HOM05D007226 ORTHO05D009160 3.9e-45 185.7 124 66.1
BolC2t10627H Brassica oleracea HOM05D007226 ORTHO05D009160 3.9e-45 185.7 124 66.1
AT5G45040 Arabidopsis thaliana HOM05D007226 ORTHO05D009160 5.1e-45 185.3 105 73.3
BolC2t10635H Brassica oleracea HOM05D007226 ORTHO05D009160 5.1e-45 185.3 124 65.3
Thhalv10001050m.g Eutrema salsugineum HOM05D007226 ORTHO05D009160 5.1e-45 185.3 105 73.3
Medtr4g083990 Medicago truncatula HOM05D007226 ORTHO05D009160 5.1e-45 185.3 124 64.5
Sabra15G0137600 Salix brachista HOM05D007226 ORTHO05D009160 6.7e-45 184.9 126 64.3
SGA_v2.0_scaffold175G39365 Striga asiatica HOM05D007226 ORTHO05D009160 6.7e-45 184.9 107 74.8
Sp2g09820 Schrenkiella parvula HOM05D007226 ORTHO05D009160 1.1e-44 184.1 121 67.8
BcaB07g30483 Brassica carinata HOM05D007226 ORTHO05D009160 1.9e-44 183.3 124 66.1
A02p28790 Brassica napus HOM05D007226 ORTHO05D009160 1.9e-44 183.3 124 66.1
TPR.G20974 Trifolium pratense HOM05D007226 ORTHO05D009160 1.9e-44 183.3 112 67.9
BraA02t07911Z Brassica rapa HOM05D007226 ORTHO05D009160 2.5e-44 183.0 124 65.3
SalBow6G7060 Salvia bowleyana HOM05D007226 ORTHO05D009160 2.5e-44 183.0 119 68.9
SalBow8G0530 Salvia bowleyana HOM05D007226 ORTHO05D009160 2.5e-44 183.0 119 68.9
BcaC03g16718 Brassica carinata HOM05D007226 ORTHO05D009160 3.3e-44 182.6 124 65.3
Cfa000717 Carpinus fangiana HOM05D007226 ORTHO05D009160 3.3e-44 182.6 125 63.2
CARHR177680 Cardamine hirsuta HOM05D007226 ORTHO05D009160 4.3e-44 182.2 105 72.4
Ciclev10017084m.g Citrus clementina HOM05D007226 ORTHO05D009160 4.3e-44 182.2 126 62.7
Phvul.002G098700 Phaseolus vulgaris HOM05D007226 ORTHO05D009160 5.7e-44 181.8 110 69.1
Carub.0008s0327 Capsella rubella HOM05D007226 ORTHO05D009160 7.4e-44 181.4 105 71.4
Lj4g0002757 Lotus japonicus HOM05D007226 ORTHO05D009160 7.4e-44 181.4 113 67.3
Cc09_g06180 Coffea canephora HOM05D007226 ORTHO05D009160 1.6e-43 180.3 123 64.2
Nn7g38162 Nelumbo nucifera HOM05D007226 ORTHO05D009160 1.6e-43 180.3 123 67.5
PGR004G0179 Punica granatum HOM05D007226 ORTHO05D009160 1.6e-43 180.3 100 77.0
ECA238G0615 Erigeron canadensis HOM05D007226 ORTHO05D009160 2.1e-43 179.9 138 60.9
MD05G1252700 Malus domestica HOM05D007226 ORTHO05D009160 2.1e-43 179.9 106 71.7
arahy.Tifrunner.gnm1.ann1.8FEK6M Arachis hypogaea HOM05D007226 ORTHO05D009160 2.8e-43 179.5 110 67.3
Gohir.A06G141000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 2.8e-43 179.5 124 61.3
Gohir.D06G145000 Gossypium hirsutum HOM05D007226 ORTHO05D009160 2.8e-43 179.5 124 61.3
Gorai.010G168700 Gossypium raimondii HOM05D007226 ORTHO05D009160 2.8e-43 179.5 124 61.3
GSVIVG01012076001 Vitis vinifera HOM05D007226 ORTHO05D009160 2.8e-43 179.5 108 71.3
Eucgr.E01876 Eucalyptus grandis HOM05D007226 ORTHO05D009160 3.7e-43 179.1 104 74.0
CSS0023119 Camellia sinensis var. sinensis HOM05D007226 ORTHO05D009160 4.8e-43 178.7 127 63.8
Prupe.4G111200 Prunus persica HOM05D007226 ORTHO05D009160 4.8e-43 178.7 110 68.2
Actinidia22392 Actinidia chinensis HOM05D007226 ORTHO05D009160 6.3e-43 178.3 104 73.1
COL.COLO4_30987 Corchorus olitorius HOM05D007226 ORTHO05D009160 6.3e-43 178.3 101 74.3
HanXRQChr14g0447221 Helianthus annuus HOM05D007226 ORTHO05D009160 6.3e-43 178.3 107 72.9
Peaxi162Scf00149g00723 Petunia axillaris HOM05D007226 ORTHO05D009160 6.3e-43 178.3 116 63.8
THA.LOC104812913 Tarenaya hassleriana HOM05D007226 ORTHO05D009160 6.3e-43 178.3 100 75.0
Cpa.g.sc135.15 Carica papaya HOM05D007226 ORTHO05D009160 8.2e-43 177.9 125 60.0
Oeu056023.2 Olea europaea HOM05D007226 ORTHO05D009160 1.1e-42 177.6 103 71.8
ClCG01G025800 Citrullus lanatus HOM05D007226 ORTHO05D009160 4.1e-42 175.6 122 64.8
Glyma.07G221900 Glycine max HOM05D007226 ORTHO05D009160 4.1e-42 175.6 115 66.1
Ca_18766_v3 Cicer arietinum L. HOM05D007226 ORTHO05D009160 5.3e-42 175.3 103 68.9
CiPaw.09G078000 Carya illinoinensis HOM05D007226 ORTHO05D009160 6.9e-42 174.9 121 63.6
Dinv05963 Davidia involucrata HOM05D007226 ORTHO05D009160 9.0e-42 174.5 123 65.9
Manes.16G056825 Manihot esculenta HOM05D007226 ORTHO05D009160 1.2e-41 174.1 112 67.9
Rhsim02G0212700 Rhododendron simsii HOM05D007226 ORTHO05D009160 1.2e-41 174.1 152 54.6
Atru.chr10.515 Acer truncatum HOM05D007226 ORTHO05D009160 1.5e-41 173.7 104 70.2
Migut.M01975 Erythranthe guttata HOM05D007226 ORTHO05D009160 1.5e-41 173.7 107 69.2
Nitab4.5_0003773g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 1.5e-41 173.7 107 69.2
PGSC0003DMG400010353 Solanum tuberosum HOM05D007226 ORTHO05D009160 1.5e-41 173.7 107 70.1
CAN.G149.55 Capsicum annuum HOM05D007226 ORTHO05D009160 2.0e-41 173.3 125 62.4
Lalb_Chr05g0219731 Lupinus albus HOM05D007226 ORTHO05D009160 2.6e-41 172.9 107 68.2
TWI38G0719 Tripterygium wilfordii HOM05D007226 ORTHO05D009160 4.5e-41 172.2 157 51.6
TAR371G1071 Trochodendron aralioides HOM05D007226 ORTHO05D009160 4.5e-41 172.2 150 55.3
CsaV3_6G053010 Cucumis sativus L. HOM05D007226 ORTHO05D009160 1.0e-40 171.0 120 64.2
RcHm_v2.0_Chr5g0020011 Rosa chinensis HOM05D007226 ORTHO05D009160 1.0e-40 171.0 103 69.9
Sopen02g018030 Solanum pennellii HOM05D007226 ORTHO05D009160 1.0e-40 171.0 107 67.3
Aa31LG9G8170 Aethionema arabicum HOM05D007226 ORTHO05D009160 2.2e-40 169.9 134 59.0
MELO3C007008.2 Cucumis melo HOM05D007226 ORTHO05D009160 2.2e-40 169.9 101 70.3
Solyc02g068930.4 Solanum lycopersicum HOM05D007226 ORTHO05D009160 3.8e-40 169.1 104 70.2
FAN25G1348 Fragaria x ananassa HOM05D007226 ORTHO05D009160 6.5e-40 168.3 103 68.0
FvH4_3g12220 Fragaria vesca HOM05D007226 ORTHO05D009160 8.5e-40 167.9 103 68.0
FAN21G0149 Fragaria x ananassa HOM05D007226 ORTHO05D009160 8.5e-40 167.9 103 68.0
arahy.Tifrunner.gnm1.ann1.X3ZR55 Arachis hypogaea HOM05D007226 ORTHO05D009160 3.2e-39 166.0 121 60.3
Lsat_1_v5_gn_2_62900 Lactuca sativa HOM05D007226 ORTHO05D009160 3.2e-39 166.0 103 70.9
CDE06G2689 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 7.2e-39 164.9 105 64.8
PSO675G1576 Papaver somniferum HOM05D007226 ORTHO05D009160 7.2e-39 164.9 100 71.0
Haze_06036 Corylus avellana HOM05D007226 ORTHO05D009160 1.6e-38 163.7 162 48.8
vmacro03514 Vaccinium macrocarpon HOM05D007226 ORTHO05D009160 3.6e-38 162.5 134 55.2
DCAR_004326 Daucus carota HOM05D007226 ORTHO05D009160 1.0e-37 161.0 100 68.0
CDE02G1897 Ceratophyllum demersum HOM05D007226 ORTHO05D009160 2.3e-37 159.8 99 67.7
Aqoxy1G01459 Aquilegia oxysepala HOM05D007226 ORTHO05D009160 5.1e-37 158.7 104 63.5
AUR62014337 Chenopodium quinoa HOM05D005358 ORTHO05D006384 4.3e-36 155.6 107 64.5
Nitab4.5_0001288g0030 Nicotiana tabacum HOM05D007226 ORTHO05D009160 1.3e-35 154.1 208 40.9
C02p45640 Brassica napus HOM05D007226 ORTHO05D009160 1.6e-35 153.7 100 69.0
SMO356G0712 Selaginella moellendorffii HOM05D007226 ORTHO05D009160 3.7e-35 152.5 135 53.3
Pp3c13_8590 Physcomitrium patens HOM05D007226 ORTHO05D009160 8.2e-35 151.4 91 70.3
AagrBONN_evm.TU.Sc2ySwM_369.234 Anthoceros agrestis HOM05D007226 ORTHO05D009160 1.4e-34 150.6 104 62.5
Sed0015403 Sechium edule HOM05D007226 ORTHO05D009160 1.4e-34 150.6 90 68.9
Mapoly0135s0037 Marchantia polymorpha HOM05D007226 ORTHO05D009160 1.2e-33 147.5 120 54.2
SEGI_36655 Sequoiadendron giganteum HOM05D007226 ORTHO05D009160 2.6e-33 146.4 98 65.3
ATR0763G163 Amborella trichopoda HOM05D007226 ORTHO05D009160 1.6e-30 137.1 131 47.3
Cre16.g670950 Chlamydomonas reinhardtii HOM05D007226 ORTHO05D009160 5.3e-26 122.1 103 50.5
MCO04G097 Micromonas commoda HOM05D007226 ORTHO05D009160 5.3e-26 122.1 89 57.3
Glyma.20G020600 Glycine max HOM05D007226 ORTHO05D009160 2.9e-24 116.3 111 48.6
Psat7g130920 Pisum sativum HOM05D007226 ORTHO05D009160 3.8e-24 115.9 96 56.2
HanXRQChr14g0447281 Helianthus annuus HOM05D007226 ORTHO05D009160 8.5e-24 114.8 132 47.7
MBI19_g38421_MAGBIO Magnolia biondii HOM05D007226 ORTHO05D009160 1.0e-21 107.8 148 39.9
Lj2C351T11 Lonicera japonica HOM05D007226 ORTHO05D009160 1.1e-20 104.4 65 69.2
Hma1.2p1_0040F.1_g025140 Hydrangea macrophylla HOM05D007226 ORTHO05D009160 1.5e-20 104.0 59 72.9
HPP92_015945 Vanilla planifolia HOM05D007226 ORTHO05D009160 2.0e-20 103.6 69 62.3
PRCOL_00005064 Prasinoderma coloniale HOM05D007226 ORTHO05D009160 4.5e-17 92.4 88 46.6
PSO541G5038 Papaver somniferum HOM05D007226 ORTHO05D009160 2.5e-15 86.7 52 71.2
Sc01g0006700 Simmondsia chinensis HOM05D005358 ORTHO05D006384 6.5e-08 62.0 114 46.5
MD10G1233800 Malus domestica HOM05D007226 ORTHO05D009160 2.5e-07 60.1 39 64.1


User provided reference genes

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