Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc15g0002580 Simmondsia chinensis HOM05D006894 ORTHO05D008724 2.3e-254 881.7 433 100.0
GSVIVG01022874001 Vitis vinifera HOM05D006894 ORTHO05D008724 2.6e-149 532.7 366 69.9
QL02p099211 Quercus lobata HOM05D006894 ORTHO05D008724 5.4e-147 525.0 362 68.8
Ciclev10001270m.g Citrus clementina HOM05D006894 ORTHO05D008724 9.2e-147 524.2 383 67.6
Cfa005507 Carpinus fangiana HOM05D006894 ORTHO05D008724 7.8e-146 521.2 363 68.9
Atru.chr6.599 Acer truncatum HOM05D006894 ORTHO05D008724 1.0e-145 520.8 363 69.4
Atru.chr6.614 Acer truncatum HOM05D006894 ORTHO05D008724 1.7e-145 520.0 363 69.4
TAR628G1558 Trochodendron aralioides HOM05D006894 ORTHO05D008724 1.7e-145 520.0 431 61.9
Thecc.02G114400 Theobroma cacao HOM05D006894 ORTHO05D008724 2.3e-145 519.6 431 60.3
CANSAT11G1074 Cannabis sativa HOM05D006894 ORTHO05D008724 3.0e-145 519.2 392 64.8
Gohir.A03G193500 Gossypium hirsutum HOM05D006894 ORTHO05D008724 3.9e-145 518.8 360 67.2
Gohir.D02G214600 Gossypium hirsutum HOM05D006894 ORTHO05D008724 5.1e-145 518.5 360 67.5
Gorai.005G242400 Gossypium raimondii HOM05D006894 ORTHO05D008724 5.1e-145 518.5 360 67.5
CiPaw.05G048800 Carya illinoinensis HOM05D006894 ORTHO05D008724 1.1e-144 517.3 377 65.5
COL.COLO4_11781 Corchorus olitorius HOM05D006894 ORTHO05D008724 1.1e-144 517.3 417 61.4
Duzib248G0689 Durio zibethinus HOM05D006894 ORTHO05D008724 1.9e-144 516.5 382 64.1
Prupe.1G571400 Prunus persica HOM05D006894 ORTHO05D008724 3.3e-144 515.8 363 68.0
MD08G1235500 Malus domestica HOM05D006894 ORTHO05D008724 4.3e-144 515.4 402 62.4
CAN.G798.8 Capsicum annuum HOM05D006894 ORTHO05D008724 8.1e-143 511.1 370 66.8
Nn1g08851 Nelumbo nucifera HOM05D006894 ORTHO05D008724 8.1e-143 511.1 389 64.3
Nitab4.5_0000816g0080 Nicotiana tabacum HOM05D006894 ORTHO05D008724 6.8e-142 508.1 366 66.9
RcHm_v2.0_Chr7g0221781 Rosa chinensis HOM05D006894 ORTHO05D008724 1.5e-141 506.9 364 67.3
FAN08G3638 Fragaria x ananassa HOM05D006894 ORTHO05D008724 2.6e-141 506.1 365 66.8
Solyc01g104060.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 4.4e-141 505.4 370 65.1
Ca_17824_v3 Cicer arietinum L. HOM05D006894 ORTHO05D008724 5.8e-141 505.0 361 67.0
Sopen01g046470 Solanum pennellii HOM05D006894 ORTHO05D008724 5.8e-141 505.0 370 65.1
VMungo0251G0921 Vigna mungo HOM05D006894 ORTHO05D008724 5.8e-141 505.0 360 66.4
arahy.Tifrunner.gnm1.ann1.NZQI89 Arachis hypogaea HOM05D006894 ORTHO05D008724 3.8e-140 502.3 359 66.3
Nitab4.5_0010336g0030 Nicotiana tabacum HOM05D006894 ORTHO05D008724 4.9e-140 501.9 355 68.5
Glyma.05G168900 Glycine max HOM05D006894 ORTHO05D008724 1.4e-139 500.4 399 62.4
TWI14G1412 Tripterygium wilfordii HOM05D006894 ORTHO05D008724 1.4e-139 500.4 380 62.4
Lsat_1_v5_gn_9_118621 Lactuca sativa HOM05D006894 ORTHO05D008724 2.4e-139 499.6 379 64.9
Psat7g062040 Pisum sativum HOM05D006894 ORTHO05D008724 2.4e-139 499.6 402 61.9
arahy.Tifrunner.gnm1.ann1.7VS6FJ Arachis hypogaea HOM05D006894 ORTHO05D008724 3.2e-139 499.2 359 65.7
Carub.0002s0422 Capsella rubella HOM05D006894 ORTHO05D008724 4.2e-139 498.8 395 62.3
Lalb_Chr12g0204471 Lupinus albus HOM05D006894 ORTHO05D008724 4.2e-139 498.8 361 65.7
Manes.07G017700 Manihot esculenta HOM05D006894 ORTHO05D008724 9.2e-139 497.7 384 63.3
Phvul.002G249600 Phaseolus vulgaris HOM05D006894 ORTHO05D008724 9.2e-139 497.7 360 65.0
TPR.G23092 Trifolium pratense HOM05D006894 ORTHO05D008724 9.2e-139 497.7 368 64.1
CsaV3_6G037480 Cucumis sativus L. HOM05D006894 ORTHO05D008724 6.0e-138 495.0 363 67.8
Thhalv10023478m.g Eutrema salsugineum HOM05D006894 ORTHO05D008724 6.0e-138 495.0 363 64.7
AT1G60990 Arabidopsis thaliana HOM05D006894 ORTHO05D008724 7.8e-138 494.6 412 59.2
CARHR052050 Cardamine hirsuta HOM05D006894 ORTHO05D008724 7.8e-138 494.6 363 63.4
THA.LOC104809620 Tarenaya hassleriana HOM05D006894 ORTHO05D008724 1.0e-137 494.2 371 63.6
Eucgr.G00568 Eucalyptus grandis HOM05D006894 ORTHO05D008724 3.9e-137 492.3 360 65.8
Medtr8g088790 Medicago truncatula HOM05D006894 ORTHO05D008724 3.9e-137 492.3 408 60.8
AL2G15470 Arabidopsis lyrata HOM05D006894 ORTHO05D008724 2.5e-136 489.6 405 59.5
PSO170G1552 Papaver somniferum HOM05D006894 ORTHO05D008724 4.3e-136 488.8 419 59.2
PSO528G0189 Papaver somniferum HOM05D006894 ORTHO05D008724 4.3e-136 488.8 429 59.0
BcaC09g49347 Brassica carinata HOM05D006894 ORTHO05D008724 7.3e-136 488.0 361 63.4
Peaxi162Scf00017g02640 Petunia axillaris HOM05D006894 ORTHO05D008724 9.6e-136 487.6 346 67.9
Oeu027798.1 Olea europaea HOM05D006894 ORTHO05D008724 2.1e-135 486.5 360 64.2
A01p29780 Brassica napus HOM05D006894 ORTHO05D008724 3.6e-135 485.7 361 62.9
Sp2g03530 Schrenkiella parvula HOM05D006894 ORTHO05D008724 3.6e-135 485.7 363 63.1
C01p37610 Brassica napus HOM05D006894 ORTHO05D008724 4.8e-135 485.3 361 62.9
Aqoxy6G00238 Aquilegia oxysepala HOM05D006894 ORTHO05D008724 3.1e-134 482.6 358 65.1
PGSC0003DMG400023767 Solanum tuberosum HOM05D006894 ORTHO05D008724 4.4e-133 478.8 390 62.1
HanXRQChr09g0249011 Helianthus annuus HOM05D006894 ORTHO05D008724 5.8e-133 478.4 357 64.1
Cc02_g22630 Coffea canephora HOM05D006894 ORTHO05D008724 7.6e-133 478.0 381 62.7
Lj9A304G82 Lonicera japonica HOM05D006894 ORTHO05D008724 4.2e-131 472.2 399 58.6
Peaxi162Scf00011g00531 Petunia axillaris HOM05D006894 ORTHO05D008724 7.1e-131 471.5 378 62.2
Migut.B00823 Erythranthe guttata HOM05D006894 ORTHO05D008724 3.5e-130 469.2 365 61.1
Aa31LG2G9600 Aethionema arabicum HOM05D006894 ORTHO05D008724 6.0e-130 468.4 369 61.0
Lj4g0002387 Lotus japonicus HOM05D006894 ORTHO05D008724 7.8e-130 468.0 339 65.8
PGR042G0448 Punica granatum HOM05D006894 ORTHO05D008724 7.8e-130 468.0 425 58.4
ECA240G3758 Erigeron canadensis HOM05D006894 ORTHO05D008724 1.0e-129 467.6 385 60.8
Sed0001229 Sechium edule HOM05D006894 ORTHO05D008724 1.7e-129 466.8 349 66.8
CDE08G1218 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 3.9e-129 465.7 353 64.0
ATR0665G083 Amborella trichopoda HOM05D006894 ORTHO05D008724 7.3e-128 461.5 361 62.3
FAN18G4164 Fragaria x ananassa HOM05D006894 ORTHO05D008724 7.3e-128 461.5 402 58.5
DCAR_006702 Daucus carota HOM05D006894 ORTHO05D008724 9.6e-128 461.1 363 61.7
MSTRG.20303 Avicennia marina HOM05D006894 ORTHO05D008724 2.8e-127 459.5 360 63.1
vmacro01754 Vaccinium macrocarpon HOM05D006894 ORTHO05D008724 2.9e-124 449.5 404 57.7
FvH4_5g29120 Fragaria vesca HOM05D006894 ORTHO05D008724 1.9e-123 446.8 365 61.4
FAN04G0479 Fragaria x ananassa HOM05D006894 ORTHO05D008724 1.6e-122 443.7 366 60.4
MBI06_g01072_MAGBIO Magnolia biondii HOM05D006894 ORTHO05D008724 1.0e-121 441.0 470 50.9
BcaB04g20304 Brassica carinata HOM05D006894 ORTHO05D008724 2.5e-120 436.4 365 57.8
Actinidia39033 Actinidia chinensis HOM05D006894 ORTHO05D008724 4.3e-120 435.6 347 61.7
SEGI_07604 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 1.1e-118 431.0 354 60.2
Rhsim11G0128300 Rhododendron simsii HOM05D006894 ORTHO05D008724 1.4e-118 430.6 385 57.9
Mapoly0039s0108 Marchantia polymorpha HOM05D006894 ORTHO05D008724 6.9e-110 401.7 357 54.3
Actinidia30531 Actinidia chinensis HOM05D006894 ORTHO05D008724 9.0e-110 401.4 350 57.1
Dinv19376 Davidia involucrata HOM05D006894 ORTHO05D008724 1.6e-106 390.6 279 66.7
Pp3c9_20800 Physcomitrium patens HOM05D006894 ORTHO05D008724 2.7e-106 389.8 358 52.5
AagrBONN_evm.TU.Sc2ySwM_344.1590 Anthoceros agrestis HOM05D006894 ORTHO05D007218 3.5e-106 389.4 318 58.5
SMO119G0367 Selaginella moellendorffii HOM05D006894 ORTHO05D008724 1.3e-103 380.9 343 55.7
Haze_01731 Corylus avellana HOM05D006894 ORTHO05D008724 7.2e-99 365.2 434 48.4
MELO3C014368.2 Cucumis melo HOM05D006894 ORTHO05D008724 7.2e-99 365.2 364 54.7
CBR_g30837 Chara braunii HOM05D000019 ORTHO05D000048 7.4e-96 355.1 345 51.6
FAN13G2283 Fragaria x ananassa HOM05D006894 ORTHO05D008724 4.8e-87 325.9 365 49.6
BolC1t03726H Brassica oleracea HOM05D006894 ORTHO05D008724 1.4e-86 324.3 236 63.6
BraA01t03106Z Brassica rapa HOM05D006894 ORTHO05D008724 4.1e-86 322.8 236 63.1
unitig_749.g14128 Utricularia gibba HOM05D006894 ORTHO05D008724 3.2e-83 313.2 284 54.9
CSS0024184 Camellia sinensis var. sinensis HOM05D006894 ORTHO05D008724 3.0e-81 306.6 363 46.0
SEGI_10844 Sequoiadendron giganteum HOM05D006894 ORTHO05D008724 9.8e-72 275.0 314 47.8
Cre12.g552850 Chlamydomonas reinhardtii HOM05D006894 ORTHO05D008724 2.9e-60 236.9 354 38.4
Rhsim09G0048600 Rhododendron simsii HOM05D006894 ORTHO05D008724 2.3e-49 200.7 167 60.5
Cpa.g.sc30.18 Carica papaya HOM05D006894 ORTHO05D008724 2.7e-45 187.2 130 66.9
ClCG09G014030 Citrullus lanatus HOM05D006894 ORTHO05D008724 1.5e-40 171.4 127 65.4
Rhsim09G0016000 Rhododendron simsii HOM05D006894 ORTHO05D008724 3.0e-36 157.1 180 47.2
BcaB05g23073 Brassica carinata HOM05D006894 ORTHO05D008724 4.0e-33 146.7 108 63.9
BcaB01g03502 Brassica carinata HOM05D006894 ORTHO05D008724 3.2e-30 137.1 127 55.1
Pp3c5_7230 Physcomitrium patens HOM05D006894 ORTHO05D008724 2.0e-24 117.9 167 41.9
Cpa.g.sc30.19 Carica papaya HOM05D006894 ORTHO05D008724 7.6e-24 115.9 112 52.7
ClCG09G014040 Citrullus lanatus HOM05D006894 ORTHO05D008724 2.1e-21 107.8 79 60.8
BcaB02g10691 Brassica carinata HOM05D000189 ORTHO05D000474 5.1e-20 103.2 127 44.1
PRCOL_00004673 Prasinoderma coloniale HOM05D006894 ORTHO05D008724 1.5e-19 101.7 373 25.5
Solyc09g015460.3 Solanum lycopersicum HOM05D006894 ORTHO05D008724 4.3e-19 100.1 60 75.0
Duzib052G1224 Durio zibethinus HOM05D006894 ORTHO05D008724 2.8e-18 97.4 61 73.8
Glyma.08G127500 Glycine max HOM05D006894 ORTHO05D008724 2.2e-15 87.8 101 43.6
ClCG09G014050 Citrullus lanatus HOM05D006894 ORTHO05D008724 1.0e-12 79.0 59 66.1
unitig_749.g14127 Utricularia gibba HOM05D006894 ORTHO05D008724 1.0e-12 79.0 78 52.6
CAN.G798.10 Capsicum annuum HOM05D006894 ORTHO05D008724 2.5e-11 74.3 178 30.3
Peaxi162Scf01350g00016 Petunia axillaris HOM05D006894 ORTHO05D008724 2.8e-10 70.9 52 65.4
Cpa.g.sc3656.1 Carica papaya HOM05D006894 ORTHO05D008724 9.9e-08 62.4 49 57.1
CDE06G1775 Ceratophyllum demersum HOM05D006894 ORTHO05D008724 9.3e-06 55.8 68 42.6


User provided reference genes

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