Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc15g0002300 Simmondsia chinensis HOM05D007045 ORTHO05D008872 1.1e-82 310.1 168 100.0
TAR375G0210 Trochodendron aralioides HOM05D007045 ORTHO05D008872 4.2e-31 138.7 107 67.3
AUR62002059 Chenopodium quinoa HOM05D007045 ORTHO05D008872 7.2e-31 137.9 107 72.9
Hund09789 Selenicereus undatus HOM05D007045 ORTHO05D008872 7.2e-31 137.9 98 74.5
Dinv29160 Davidia involucrata HOM05D007045 ORTHO05D008872 2.1e-30 136.3 106 67.9
CiPaw.05G239000 Carya illinoinensis HOM05D007045 ORTHO05D008872 3.0e-29 132.5 107 63.6
Cfa015871 Carpinus fangiana HOM05D007045 ORTHO05D008872 4.0e-29 132.1 107 61.7
QL09p024203 Quercus lobata HOM05D007045 ORTHO05D008872 6.8e-29 131.3 107 60.7
QL09p024468 Quercus lobata HOM05D007045 ORTHO05D008872 6.8e-29 131.3 107 60.7
Nn1g01937 Nelumbo nucifera HOM05D007045 ORTHO05D008872 1.2e-28 130.6 107 62.6
EL10Ac3g05081 Beta vulgaris HOM05D007045 ORTHO05D008872 1.3e-27 127.1 98 72.4
Actinidia34304 Actinidia chinensis HOM05D007045 ORTHO05D008872 2.2e-27 126.3 107 63.6
Prupe.2G325600 Prunus persica HOM05D007045 ORTHO05D008872 2.2e-27 126.3 109 67.0
GSVIVG01024412001 Vitis vinifera HOM05D007045 ORTHO05D008872 2.2e-27 126.3 108 64.8
Ah.04g156750 Amaranthus hybridus HOM05D007045 ORTHO05D008872 6.3e-27 124.8 98 68.4
Actinidia08743 Actinidia chinensis HOM05D007045 ORTHO05D008872 8.3e-27 124.4 107 62.6
AUR62028173 Chenopodium quinoa HOM05D007045 ORTHO05D008872 1.1e-26 124.0 98 72.4
arahy.Tifrunner.gnm1.ann1.X6PR1P Arachis hypogaea HOM05D007045 ORTHO05D008872 4.1e-26 122.1 110 62.7
SalBow4G0316 Salvia bowleyana HOM05D007045 ORTHO05D008872 4.1e-26 122.1 102 62.7
TPR.G25217 Trifolium pratense HOM05D007045 ORTHO05D008872 4.1e-26 122.1 107 64.5
Potri.019G049300 Populus trichocarpa HOM05D007045 ORTHO05D008872 1.6e-25 120.2 108 63.9
Eucgr.K00089 Eucalyptus grandis HOM05D007045 ORTHO05D008872 2.0e-25 119.8 110 63.6
HanXRQChr05g0141731 Helianthus annuus HOM05D007045 ORTHO05D008872 2.0e-25 119.8 101 61.4
Sabra19G0058900 Salix brachista HOM05D007045 ORTHO05D008872 2.0e-25 119.8 107 66.4
Duzib168G0464 Durio zibethinus HOM05D007045 ORTHO05D008872 2.7e-25 119.4 114 57.9
Lsat_1_v5_gn_9_47440 Lactuca sativa HOM05D007045 ORTHO05D008872 2.7e-25 119.4 113 61.1
HPP92_009021 Vanilla planifolia HOM05D007045 ORTHO05D008872 2.7e-25 119.4 108 63.0
arahy.Tifrunner.gnm1.ann1.X2XK4P Arachis hypogaea HOM05D007045 ORTHO05D008872 3.5e-25 119.0 107 62.6
Oeu041498.1 Olea europaea HOM05D007045 ORTHO05D008872 3.5e-25 119.0 107 59.8
Sopen03g027710 Solanum pennellii HOM05D007045 ORTHO05D008872 4.5e-25 118.6 109 61.5
Glyma.19G000800 Glycine max HOM05D007045 ORTHO05D008872 7.7e-25 117.9 109 60.6
Lj2g0018633 Lotus japonicus HOM05D007045 ORTHO05D008872 7.7e-25 117.9 108 62.0
CDE03G0192 Ceratophyllum demersum HOM05D007045 ORTHO05D008872 1.3e-24 117.1 103 61.2
Manes.08G162500 Manihot esculenta HOM05D007045 ORTHO05D008872 1.3e-24 117.1 107 61.7
Nitab4.5_0011930g0010 Nicotiana tabacum HOM05D007045 ORTHO05D008872 1.3e-24 117.1 109 60.6
Atru.chr12.1972 Acer truncatum HOM05D007045 ORTHO05D008872 2.2e-24 116.3 112 58.0
CSS0008098 Camellia sinensis var. sinensis HOM05D007045 ORTHO05D008872 2.2e-24 116.3 103 61.2
ECA232G1212 Erigeron canadensis HOM05D007045 ORTHO05D008872 2.2e-24 116.3 110 60.0
Nitab4.5_0000021g0510 Nicotiana tabacum HOM05D007045 ORTHO05D008872 2.2e-24 116.3 137 50.4
Thecc.09G264800 Theobroma cacao HOM05D007045 ORTHO05D008872 2.2e-24 116.3 114 57.0
Glyma.05G000800 Glycine max HOM05D007045 ORTHO05D008872 2.9e-24 115.9 107 60.7
Gohir.A09G104600 Gossypium hirsutum HOM05D007045 ORTHO05D008872 2.9e-24 115.9 113 58.4
Gohir.D09G101300 Gossypium hirsutum HOM05D007045 ORTHO05D008872 2.9e-24 115.9 113 58.4
Solyc03g096960.3 Solanum lycopersicum HOM05D007045 ORTHO05D008872 2.9e-24 115.9 108 61.1
VMungo0464G1228 Vigna mungo HOM05D007045 ORTHO05D008872 2.9e-24 115.9 107 57.0
FvH4_7g33930 Fragaria vesca HOM05D007045 ORTHO05D008872 3.8e-24 115.5 108 63.0
FAN01G0253 Fragaria x ananassa HOM05D007045 ORTHO05D008872 3.8e-24 115.5 108 63.0
THA.LOC104821194 Tarenaya hassleriana HOM05D007045 ORTHO05D008872 3.8e-24 115.5 114 58.8
TWI34G0185 Tripterygium wilfordii HOM05D007045 ORTHO05D008872 3.8e-24 115.5 108 62.0
SGA_v2.0_scaffold44G16886 Striga asiatica HOM05D007045 ORTHO05D008872 5.0e-24 115.2 110 59.1
COL.COLO4_25316 Corchorus olitorius HOM05D007045 ORTHO05D008872 6.5e-24 114.8 108 59.3
Gorai.006G118700 Gossypium raimondii HOM05D007045 ORTHO05D008872 6.5e-24 114.8 111 58.6
MSTRG.26931 Avicennia marina HOM05D007045 ORTHO05D008872 8.5e-24 114.4 105 61.0
FAN03G1405 Fragaria x ananassa HOM05D007045 ORTHO05D008872 1.1e-23 114.0 108 61.1
MD07G1308400 Malus domestica HOM05D007045 ORTHO05D008872 1.5e-23 113.6 108 62.0
PGSC0003DMG400000566 Solanum tuberosum HOM05D007045 ORTHO05D008872 1.9e-23 113.2 101 61.4
DCAR_020406 Daucus carota HOM05D007045 ORTHO05D008872 4.2e-23 112.1 107 57.0
Ca_04126_v3 Cicer arietinum L. HOM05D007045 ORTHO05D008872 7.2e-23 111.3 109 56.0
Hma1.2p1_1680F.1_g297210 Hydrangea macrophylla HOM05D007045 ORTHO05D008872 9.4e-23 110.9 129 51.9
RcHm_v2.0_Chr1g0384121 Rosa chinensis HOM05D007045 ORTHO05D008872 1.2e-22 110.5 106 61.3
THA.LOC104805790 Tarenaya hassleriana HOM05D007045 ORTHO05D008872 1.2e-22 110.5 107 58.9
Medtr6g004010 Medicago truncatula HOM05D007045 ORTHO05D008872 1.6e-22 110.2 108 61.1
PSO063G7366 Papaver somniferum HOM05D007045 ORTHO05D008872 2.7e-22 109.4 108 58.3
PSO782G4413 Papaver somniferum HOM05D007045 ORTHO05D008872 2.7e-22 109.4 108 58.3
Psat1g052360 Pisum sativum HOM05D007045 ORTHO05D008872 2.7e-22 109.4 108 56.5
Phvul.004G000900 Phaseolus vulgaris HOM05D007045 ORTHO05D008872 3.6e-22 109.0 98 62.2
unitig_92.g28229 Utricularia gibba HOM05D007045 ORTHO05D008872 3.6e-22 109.0 105 56.2
Ciclev10022834m.g Citrus clementina HOM05D007045 ORTHO05D008872 4.7e-22 108.6 111 55.9
FAN10G3708 Fragaria x ananassa HOM05D007045 ORTHO05D008872 4.7e-22 108.6 105 61.0
Thhalv10009120m.g Eutrema salsugineum HOM05D007045 ORTHO05D008872 6.1e-22 108.2 110 57.3
AT1G08580 Arabidopsis thaliana HOM05D007045 ORTHO05D008872 8.0e-22 107.8 110 54.5
CANSAT56G0844 Cannabis sativa HOM05D007045 ORTHO05D008872 1.0e-21 107.5 77 70.1
CANSAT56G3248 Cannabis sativa HOM05D007045 ORTHO05D008872 1.0e-21 107.5 77 70.1
A06p05570 Brassica napus HOM05D007045 ORTHO05D008872 1.8e-21 106.7 106 56.6
BraA06t23765Z Brassica rapa HOM05D007045 ORTHO05D008872 1.8e-21 106.7 106 56.6
CAN.G303.80 Capsicum annuum HOM05D007045 ORTHO05D008872 1.8e-21 106.7 91 63.7
AL1G19010 Arabidopsis lyrata HOM05D007045 ORTHO05D008872 3.0e-21 105.9 97 58.8
SalBow4G2109 Salvia bowleyana HOM05D007045 ORTHO05D008872 6.8e-21 104.8 107 56.1
Sp1g07240 Schrenkiella parvula HOM05D007045 ORTHO05D008872 8.8e-21 104.4 110 55.5
BcaB07g34101 Brassica carinata HOM05D007045 ORTHO05D008872 1.2e-20 104.0 107 57.0
C05p06680 Brassica napus HOM05D007045 ORTHO05D008872 1.2e-20 104.0 107 57.0
BolC5t29428H Brassica oleracea HOM05D007045 ORTHO05D008872 1.2e-20 104.0 107 57.0
Migut.F00099 Erythranthe guttata HOM05D007045 ORTHO05D008872 1.2e-20 104.0 107 56.1
MD01G1235600 Malus domestica HOM05D007045 ORTHO05D008872 2.6e-20 102.8 76 69.7
vmacro10189 Vaccinium macrocarpon HOM05D007045 ORTHO05D008872 3.4e-20 102.4 78 69.2
vmacro23523 Vaccinium macrocarpon HOM05D007045 ORTHO05D008872 3.4e-20 102.4 78 69.2
CDE06G1066 Ceratophyllum demersum HOM05D007045 ORTHO05D008872 1.3e-19 100.5 89 59.6
PGR142G4292 Punica granatum HOM05D007045 ORTHO05D008872 1.7e-19 100.1 111 56.8
Aqoxy3G02091 Aquilegia oxysepala HOM05D007045 ORTHO05D008872 2.8e-19 99.4 112 56.2
A09p65840 Brassica napus HOM05D007045 ORTHO05D008872 3.7e-19 99.0 103 51.5
BcaC07g41937 Brassica carinata HOM05D007045 ORTHO05D008872 4.9e-19 98.6 106 52.8
Peaxi162Scf00745g00819 Petunia axillaris HOM05D007045 ORTHO05D008872 4.9e-19 98.6 79 64.6
BraA09t41928Z Brassica rapa HOM05D007045 ORTHO05D008872 6.3e-19 98.2 103 51.5
BolC8t52521H Brassica oleracea HOM05D007045 ORTHO05D008872 8.3e-19 97.8 103 51.5
Sed0010546 Sechium edule HOM05D007045 ORTHO05D008872 8.3e-19 97.8 107 56.1
Aa31sc20G150 Aethionema arabicum HOM05D007045 ORTHO05D008872 1.1e-18 97.4 106 51.9
C08p49930 Brassica napus HOM05D007045 ORTHO05D008872 1.1e-18 97.4 103 51.5
ATR0829G056 Amborella trichopoda HOM05D007045 ORTHO05D008872 1.8e-18 96.7 99 53.5
ClCG05G007020 Citrullus lanatus HOM05D007045 ORTHO05D008872 5.4e-18 95.1 120 50.0
Potri.013G091200 Populus trichocarpa HOM05D007045 ORTHO05D008872 9.2e-18 94.4 81 61.7
CsaV3_3G015710 Cucumis sativus L. HOM05D007045 ORTHO05D008872 1.2e-17 94.0 105 55.2
MELO3C006770.2 Cucumis melo HOM05D007045 ORTHO05D008872 2.0e-17 93.2 105 55.2
Os02g0604100 Oryza sativa ssp. japonica HOM05D007045 ORTHO05D008872 1.0e-16 90.9 110 53.6
CARHR008480 Cardamine hirsuta HOM05D007045 ORTHO05D008872 1.1e-15 87.4 110 50.0
Cc02_g00300 Coffea canephora HOM05D007045 ORTHO05D008872 1.2e-14 84.0 120 45.0
Zm00001eb246550 Zea mays HOM05D007045 ORTHO05D008872 5.2e-13 78.6 110 48.2
Carub.0001s0794 Capsella rubella HOM05D007045 ORTHO05D008872 1.3e-11 73.9 70 54.3
MELO3C032558.2 Cucumis melo HOM05D007045 ORTHO05D008872 3.2e-10 69.3 78 55.1
Pp3c13_5290 Physcomitrium patens HOM05D007045 ORTHO05D008872 8.0e-06 54.7 119 36.1


User provided reference genes

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