Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc15g0001920 Simmondsia chinensis HOM05D000004 ORTHO05D000002 3.8e-79 298.1 151 100.0
Sopen11g008450 Solanum pennellii HOM05D000004 ORTHO05D000002 2.8e-10 69.3 67 50.7
Sopen08g020120 Solanum pennellii HOM05D000004 ORTHO05D000002 8.2e-10 67.8 67 49.3
PGSC0003DMG400009134 Solanum tuberosum HOM05D000004 ORTHO05D000002 1.1e-09 67.4 67 49.3
Sopen03g037800 Solanum pennellii HOM05D000004 ORTHO05D000002 1.4e-09 67.0 67 49.3
CAN.G1646.3 Capsicum annuum HOM05D000004 ORTHO05D000002 3.1e-09 65.9 67 49.3
PSO541G2137 Papaver somniferum HOM05D000004 ORTHO05D000002 3.1e-09 65.9 65 49.2
SHI30405 Sapria himalayana HOM05D000004 ORTHO05D000002 3.1e-09 65.9 84 40.5
PSO339G2271 Papaver somniferum HOM05D000004 ORTHO05D000002 4.1e-09 65.5 92 41.3
Sopen11g019720 Solanum pennellii HOM05D000004 ORTHO05D000002 4.1e-09 65.5 67 47.8
PSO210G2192 Papaver somniferum HOM05D000004 ORTHO05D000002 9.1e-09 64.3 60 55.0
CAN.G907.11 Capsicum annuum HOM05D000637 ORTHO05D001881 1.2e-08 63.9 67 49.3
PSO170G6792 Papaver somniferum HOM05D000004 ORTHO05D000002 1.2e-08 63.9 68 45.6
PSO782G3551 Papaver somniferum HOM05D000004 ORTHO05D000002 1.2e-08 63.9 60 53.3
CAN.G220.8 Capsicum annuum HOM05D000011 ORTHO05D007164 2.0e-08 63.2 67 44.8
PSO170G4441 Papaver somniferum HOM05D000004 ORTHO05D000002 2.0e-08 63.2 60 50.0
PSO063G0594 Papaver somniferum HOM05D000004 ORTHO05D000002 2.7e-08 62.8 69 47.8
PSO210G3604 Papaver somniferum HOM05D000004 ORTHO05D000002 2.7e-08 62.8 70 44.3
PSO017G1457 Papaver somniferum HOM05D000004 ORTHO05D000002 3.5e-08 62.4 60 48.3
PSO170G5198 Papaver somniferum HOM05D000004 ORTHO05D000002 3.5e-08 62.4 60 51.7
Hma1.2p1_0039F.1_g024710 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 4.5e-08 62.0 69 40.6
Hma1.2p1_1778F.1_g302020 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 4.5e-08 62.0 60 51.7
PSO013G0253 Papaver somniferum HOM05D000004 ORTHO05D000002 4.5e-08 62.0 60 50.0
Rhsim04G0143300 Rhododendron simsii HOM05D000004 ORTHO05D000002 4.5e-08 62.0 64 45.3
Manes.09G105625 Manihot esculenta HOM05D000004 ORTHO05D000002 5.9e-08 61.6 64 45.3
PSO017G0431 Papaver somniferum HOM05D000004 ORTHO05D000002 7.7e-08 61.2 60 50.0
PSO801G0138 Papaver somniferum HOM05D000004 ORTHO05D000002 7.7e-08 61.2 69 46.4
Sopen06g014260 Solanum pennellii HOM05D000004 ORTHO05D000002 7.7e-08 61.2 66 47.0
Sopen04g007630 Solanum pennellii HOM05D000004 ORTHO05D000002 1.0e-07 60.8 67 43.3
Hma1.2p1_1059F.1_g253000 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 1.3e-07 60.5 82 41.5
PSO063G5209 Papaver somniferum HOM05D000004 ORTHO05D000002 1.3e-07 60.5 60 48.3
PSO339G2726 Papaver somniferum HOM05D000004 ORTHO05D000002 1.3e-07 60.5 69 44.9
PSO541G3843 Papaver somniferum HOM05D000004 ORTHO05D000002 1.3e-07 60.5 60 50.0
Rhsim01G0051200 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.3e-07 60.5 69 42.0
RhsimUnG0227300 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.3e-07 60.5 67 41.8
Sopen05g018990 Solanum pennellii HOM05D000002 ORTHO05D000002 1.3e-07 60.5 67 43.3
PSO478G0130 Papaver somniferum HOM05D000004 ORTHO05D000002 1.7e-07 60.1 69 44.9
PSO700G0306 Papaver somniferum HOM05D000004 ORTHO05D000002 1.7e-07 60.1 60 46.7
Rhsim06G0000800 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.7e-07 60.1 67 44.8
Rhsim06G0106900 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.7e-07 60.1 67 44.8
Rhsim11G0093400 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.7e-07 60.1 67 44.8
Rhsim13G0093200 Rhododendron simsii HOM05D000004 ORTHO05D000002 1.7e-07 60.1 67 44.8
Atru.chr12.2291 Acer truncatum HOM05D000004 ORTHO05D000002 2.2e-07 59.7 64 45.3
Hma1.2p1_0085F.1_g044720 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 2.2e-07 59.7 67 43.3
PSO418G0001 Papaver somniferum HOM05D000004 ORTHO05D000002 2.2e-07 59.7 62 45.2
PSO478G1906 Papaver somniferum HOM05D000004 ORTHO05D000002 2.2e-07 59.7 60 45.0
PSO541G5297 Papaver somniferum HOM05D000004 ORTHO05D000002 2.2e-07 59.7 60 46.7
Manes.10G098575 Manihot esculenta HOM05D000004 ORTHO05D000002 2.9e-07 59.3 66 45.5
Manes.11G098550 Manihot esculenta HOM05D000004 ORTHO05D000002 2.9e-07 59.3 69 43.5
PSO017G6239 Papaver somniferum HOM05D000004 ORTHO05D000002 2.9e-07 59.3 60 46.7
PSO170G5493 Papaver somniferum HOM05D000004 ORTHO05D000002 2.9e-07 59.3 64 45.3
PSO210G2020 Papaver somniferum HOM05D000004 ORTHO05D000002 2.9e-07 59.3 60 46.7
PSO832G0680 Papaver somniferum HOM05D000004 ORTHO05D000002 2.9e-07 59.3 60 46.7
Cc10_g14980 Coffea canephora HOM05D000132 ORTHO05D000058 3.8e-07 58.9 60 45.0
PSO210G4037 Papaver somniferum HOM05D000004 ORTHO05D000002 3.8e-07 58.9 60 46.7
PSO447G0384 Papaver somniferum HOM05D000004 ORTHO05D000002 3.8e-07 58.9 60 48.3
PSO675G3961 Papaver somniferum HOM05D000004 ORTHO05D000002 3.8e-07 58.9 60 51.7
Rhsim03G0132800 Rhododendron simsii HOM05D000004 ORTHO05D000002 3.8e-07 58.9 67 38.8
Rhsim09G0107500 Rhododendron simsii HOM05D000004 ORTHO05D000002 3.8e-07 58.9 67 38.8
Rhsim12G0205800 Rhododendron simsii HOM05D000004 ORTHO05D000002 3.8e-07 58.9 64 42.2
Rhsim13G0092800 Rhododendron simsii HOM05D000004 ORTHO05D000002 3.8e-07 58.9 64 42.2
RcHm_v2.0_Chr3g0451511 Rosa chinensis HOM05D000004 ORTHO05D000002 3.8e-07 58.9 64 45.3
Manes.15G135402 Manihot esculenta HOM05D000004 ORTHO05D000002 5.0e-07 58.5 65 40.0
PSO170G5455 Papaver somniferum HOM05D000004 ORTHO05D000002 5.0e-07 58.5 58 44.8
PSO339G5467 Papaver somniferum HOM05D000004 ORTHO05D000002 6.5e-07 58.2 60 50.0
Sopen00g005290 Solanum pennellii HOM05D000004 ORTHO05D000002 6.5e-07 58.2 67 41.8
Sopen01g025150 Solanum pennellii HOM05D000004 ORTHO05D000002 6.5e-07 58.2 67 41.8
Manes.10G117250 Manihot esculenta HOM05D000004 ORTHO05D000002 8.5e-07 57.8 64 46.9
PSO170G3021 Papaver somniferum HOM05D000004 ORTHO05D000002 8.5e-07 57.8 65 43.1
PSO170G4265 Papaver somniferum HOM05D000004 ORTHO05D000002 1.1e-06 57.4 80 41.2
PSO478G2363 Papaver somniferum HOM05D000004 ORTHO05D000002 1.5e-06 57.0 64 45.3
Sopen01g013800 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-06 57.0 67 41.8
PSO063G7453 Papaver somniferum HOM05D000004 ORTHO05D000002 1.9e-06 56.6 63 42.9
PSO541G2518 Papaver somniferum HOM05D000004 ORTHO05D000002 1.9e-06 56.6 85 40.0
PSO170G3542 Papaver somniferum HOM05D000004 ORTHO05D000002 2.5e-06 56.2 60 46.7
Manes.17G019650 Manihot esculenta HOM05D000004 ORTHO05D000002 3.2e-06 55.8 86 39.5
PSO063G4960 Papaver somniferum HOM05D000004 ORTHO05D000002 3.2e-06 55.8 60 46.7
RcHm_v2.0_Chr7g0185771 Rosa chinensis HOM05D000004 ORTHO05D000002 3.2e-06 55.8 78 41.0
PSO339G4175 Papaver somniferum HOM05D000004 ORTHO05D000002 4.2e-06 55.5 60 43.3
PSO731G0045 Papaver somniferum HOM05D000004 ORTHO05D000002 4.2e-06 55.5 60 41.7
PSO782G2184 Papaver somniferum HOM05D000004 ORTHO05D000002 4.2e-06 55.5 60 41.7
PSO782G4277 Papaver somniferum HOM05D000004 ORTHO05D000002 4.2e-06 55.5 59 47.5
Rhsim01G0083100 Rhododendron simsii HOM05D000004 ORTHO05D000002 4.2e-06 55.5 69 40.6
RcHm_v2.0_Chr4g0399111 Rosa chinensis HOM05D000004 ORTHO05D000002 4.2e-06 55.5 64 42.2
Manes.04G009666 Manihot esculenta HOM05D000004 ORTHO05D000002 5.5e-06 55.1 71 43.7
PSO017G5410 Papaver somniferum HOM05D000004 ORTHO05D000002 5.5e-06 55.1 60 46.7
PSO675G4584 Papaver somniferum HOM05D000004 ORTHO05D000002 5.5e-06 55.1 60 45.0
PSO782G2877 Papaver somniferum HOM05D000004 ORTHO05D000002 5.5e-06 55.1 58 44.8
PSO782G3890 Papaver somniferum HOM05D000004 ORTHO05D000002 5.5e-06 55.1 65 40.0
Rhsim01G0082100 Rhododendron simsii HOM05D000004 ORTHO05D000002 5.5e-06 55.1 69 42.0
Manes.02G218460 Manihot esculenta HOM05D000004 ORTHO05D000002 7.2e-06 54.7 66 39.4
Manes.10G090351 Manihot esculenta HOM05D000004 ORTHO05D000002 7.2e-06 54.7 60 48.3
PSO017G2533 Papaver somniferum HOM05D000004 ORTHO05D000002 7.2e-06 54.7 60 45.0
Rhsim07G0103000 Rhododendron simsii HOM05D000004 ORTHO05D000002 7.2e-06 54.7 82 36.6
TWI60G0240 Tripterygium wilfordii HOM05D000004 ORTHO05D000002 7.2e-06 54.7 60 46.7
ECA248G1389 Erigeron canadensis HOM05D000002 ORTHO05D000001 9.4e-06 54.3 88 39.8
Hma1.2p1_1499F.1_g287190 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 9.4e-06 54.3 58 48.3
PSO210G2814 Papaver somniferum HOM05D000004 ORTHO05D000002 9.4e-06 54.3 60 46.7
SHI33292 Sapria himalayana HOM05D000004 ORTHO05D000002 9.4e-06 54.3 125 29.6


User provided reference genes

Program Settings