Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc15g0001070 Simmondsia chinensis HOM05D003426 ORTHO05D030610 4.3e-53 211.1 107 100.0
Sc14g0000930 Simmondsia chinensis HOM05D003426 ORTHO05D003816 2.0e-34 149.1 103 72.8
Sc11g0004240 Simmondsia chinensis HOM05D003426 ORTHO05D030610 1.7e-25 119.4 95 65.3
Sc14g0004950 Simmondsia chinensis HOM05D003426 ORTHO05D030610 1.6e-20 102.8 64 78.1
Sc06g0004430 Simmondsia chinensis HOM05D024065 ORTHO05D030610 1.4e-08 63.2 64 51.6
Dinv42844 Davidia involucrata HOM05D003426 ORTHO05D003816 5.5e-08 61.2 94 36.2
Dinv43256 Davidia involucrata HOM05D003426 ORTHO05D003816 5.5e-08 61.2 94 36.2
Gohir.D07G031500 Gossypium hirsutum HOM05D003426 ORTHO05D003816 3.5e-07 58.5 35 71.4
Gorai.001G032900 Gossypium raimondii HOM05D003426 ORTHO05D003816 3.5e-07 58.5 35 71.4
Gohir.A07G027500 Gossypium hirsutum HOM05D003426 ORTHO05D003816 7.9e-07 57.4 35 68.6
TWI34G0373 Tripterygium wilfordii HOM05D003426 ORTHO05D003816 1.3e-06 56.6 70 44.3
MSTRG.26266 Avicennia marina HOM05D003426 ORTHO05D003816 1.8e-06 56.2 68 38.2
Sc16g0001500 Simmondsia chinensis HOM05D006676 ORTHO05D008394 1.8e-06 56.2 65 52.3
Duzib168G0934 Durio zibethinus HOM05D003426 ORTHO05D003816 2.3e-06 55.8 77 39.0
CSS0024837 Camellia sinensis var. sinensis HOM05D003426 ORTHO05D003816 3.9e-06 55.1 99 35.4
Sabra06G0139100 Salix brachista HOM05D003426 ORTHO05D003816 5.1e-06 54.7 70 42.9
ECA236G2514 Erigeron canadensis HOM05D003426 ORTHO05D003816 6.7e-06 54.3 100 33.0
Hund08921 Selenicereus undatus HOM05D003426 ORTHO05D003816 6.7e-06 54.3 84 32.1
Potri.006G182601 Populus trichocarpa HOM05D003426 ORTHO05D003816 8.7e-06 53.9 40 52.5


User provided reference genes

Program Settings