Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc15g0000240 Simmondsia chinensis HOM05D008835 ORTHO05D011094 7.8e-100 369.0 191 100.0
CANSAT01G3131 Cannabis sativa HOM05D008835 ORTHO05D011094 1.2e-52 212.2 193 56.0
Cpa.g.sc2.190 Carica papaya HOM05D008835 ORTHO05D011094 5.3e-48 196.8 194 59.8
Aa31LG2G8150 Aethionema arabicum HOM05D008835 ORTHO05D011094 4.2e-45 187.2 194 55.7
AL5G10840 Arabidopsis lyrata HOM05D008835 ORTHO05D011094 2.7e-44 184.5 194 54.6
AT2G01740 Arabidopsis thaliana HOM05D008835 ORTHO05D011094 3.6e-44 184.1 194 54.6
Sp2g13190 Schrenkiella parvula HOM05D008835 ORTHO05D011094 3.0e-43 181.0 194 53.6
Thhalv10003932m.g Eutrema salsugineum HOM05D008835 ORTHO05D011094 5.1e-43 180.3 194 53.6
CSS0047579 Camellia sinensis var. sinensis HOM05D008835 ORTHO05D011094 9.7e-42 176.0 195 55.4
CARHR144310 Cardamine hirsuta HOM05D008835 ORTHO05D011094 1.2e-39 169.1 195 50.8
Cc11_g07380 Coffea canephora HOM05D008835 ORTHO05D011094 2.0e-39 168.3 197 44.7
RcHm_v2.0_Chr4g0443001 Rosa chinensis HOM05D008835 ORTHO05D011094 6.5e-38 163.3 193 54.4
Prupe.1G333800 Prunus persica HOM05D008835 ORTHO05D011094 1.9e-37 161.8 190 52.6
C09p30430 Brassica napus HOM05D008835 ORTHO05D011094 1.2e-36 159.1 196 49.0
BolC9t55906H Brassica oleracea HOM05D008835 ORTHO05D011094 8.0e-36 156.4 196 48.5
BcaC04g21553 Brassica carinata HOM05D008835 ORTHO05D011094 1.4e-35 155.6 196 48.0
Dinv10471 Davidia involucrata HOM05D008835 ORTHO05D011094 1.8e-35 155.2 193 50.8
BraA09t37964Z Brassica rapa HOM05D008835 ORTHO05D011094 1.2e-31 142.5 196 45.9
A09p23600 Brassica napus HOM05D008835 ORTHO05D011094 3.5e-31 141.0 196 45.9
Hma1.2p1_0277F.1_g111660 Hydrangea macrophylla HOM05D008835 ORTHO05D011094 2.6e-26 124.8 194 45.4
Hma1.2p1_0277F.1_g111665 Hydrangea macrophylla HOM05D008835 ORTHO05D011094 2.6e-26 124.8 194 45.4
Carub.0005s0069 Capsella rubella HOM05D008835 ORTHO05D011094 1.3e-25 122.5 122 47.5
CsaV3_5G014350 Cucumis sativus L. HOM05D008835 ORTHO05D011094 1.7e-25 122.1 193 36.3
Nn4g26594 Nelumbo nucifera HOM05D008835 ORTHO05D011094 2.4e-24 118.2 118 48.3
COL.COLO4_16597 Corchorus olitorius HOM05D002001 ORTHO05D006833 1.2e-23 115.9 193 45.1
ClCG07G005540 Citrullus lanatus HOM05D008835 ORTHO05D011094 1.9e-21 108.6 112 47.3
Gohir.D01G139800 Gossypium hirsutum HOM05D008835 ORTHO05D011094 1.9e-21 108.6 189 43.4
Gorai.002G171900 Gossypium raimondii HOM05D008835 ORTHO05D011094 1.9e-21 108.6 189 43.4
Gohir.A01G146600 Gossypium hirsutum HOM05D008835 ORTHO05D011094 1.0e-19 102.8 189 41.8
Cc11_g07320 Coffea canephora HOM05D008835 ORTHO05D011094 5.2e-19 100.5 112 47.3
Sed0018402 Sechium edule HOM05D008835 ORTHO05D011094 8.8e-19 99.8 193 40.9
TAR374G1374 Trochodendron aralioides HOM05D008835 ORTHO05D011094 3.4e-18 97.8 193 39.9
Lj3P864T25 Lonicera japonica HOM05D008835 ORTHO05D011094 7.0e-16 90.1 82 56.1
Actinidia34037 Actinidia chinensis HOM05D008835 ORTHO05D011094 1.9e-13 82.0 52 65.4
ATR0753G127 Amborella trichopoda HOM05D008835 ORTHO05D011094 1.6e-12 79.0 87 44.8
RcHm_v2.0_Chr2g0123271 Rosa chinensis HOM05D008835 ORTHO05D011094 1.6e-12 79.0 80 53.8
Oeu044008.1 Olea europaea HOM05D008835 ORTHO05D011094 6.4e-09 67.0 57 52.6
Thecc.02G293200 Theobroma cacao HOM05D008835 ORTHO05D030527 8.3e-09 66.6 122 36.9
AUR62000377 Chenopodium quinoa HOM05D000162 ORTHO05D000090 7.8e-07 60.1 156 26.3
DCAR_026165 Daucus carota HOM05D000001 ORTHO05D009144 1.3e-06 59.3 143 30.1
Gohir.D08G158800 Gossypium hirsutum HOM05D000104 ORTHO05D008354 1.3e-06 59.3 152 35.5
Atru.chr12.1792 Acer truncatum HOM05D000001 ORTHO05D010091 1.7e-06 58.9 95 30.5
Gohir.A06G150300 Gossypium hirsutum HOM05D000001 ORTHO05D009952 1.7e-06 58.9 192 25.5
Glyma.01G073500 Glycine max HOM05D000104 ORTHO05D009920 3.0e-06 58.2 156 34.6
Duzib235G0261 Durio zibethinus HOM05D000001 ORTHO05D009952 5.0e-06 57.4 192 25.0
Gorai.013G000300 Gossypium raimondii HOM05D007063 ORTHO05D008822 5.0e-06 57.4 168 25.0
Eucgr.E03144 Eucalyptus grandis HOM05D002986 ORTHO05D007611 6.6e-06 57.0 174 28.7
TWI23G0079 Tripterygium wilfordii HOM05D000001 ORTHO05D009144 6.6e-06 57.0 190 24.2
BolC3t19678H Brassica oleracea HOM05D006174 ORTHO05D007987 8.6e-06 56.6 131 23.7
Glyma.06G020900 Glycine max HOM05D000424 ORTHO05D000355 8.6e-06 56.6 154 25.3
SMO353G0107 Selaginella moellendorffii HOM05D000001 ORTHO05D000003 8.6e-06 56.6 190 26.3


User provided reference genes

Program Settings