Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc14g0008150 Simmondsia chinensis HOM05D008654 ORTHO05D010476 7.4e-275 949.9 470 100.0
Sc13g0006520 Simmondsia chinensis HOM05D008654 ORTHO05D010476 6.4e-69 265.8 207 65.7
Sc08g0005840 Simmondsia chinensis HOM05D008654 ORTHO05D010476 1.2e-67 261.5 340 48.5
Sc17g0003280 Simmondsia chinensis HOM05D008654 ORTHO05D010476 1.4e-52 211.5 135 82.2
EL10Ac2g03557 Beta vulgaris HOM05D000107 ORTHO05D010932 2.1e-35 154.5 292 32.2
EL10Ac8g19342 Beta vulgaris HOM05D000107 ORTHO05D000062 1.3e-32 145.2 371 28.8
AUR62042482 Chenopodium quinoa HOM05D000107 ORTHO05D010932 2.8e-32 144.1 276 33.0
Hund22907 Selenicereus undatus HOM05D008654 ORTHO05D010476 1.8e-31 141.4 189 41.3
AUR62007687 Chenopodium quinoa HOM05D000107 ORTHO05D010932 6.9e-31 139.4 317 30.0
AUR62029573 Chenopodium quinoa HOM05D000107 ORTHO05D010932 6.9e-31 139.4 317 30.0
Hund11127 Selenicereus undatus HOM05D000107 ORTHO05D010932 3.4e-30 137.1 306 31.4
AUR62041941 Chenopodium quinoa HOM05D000107 ORTHO05D010932 3.8e-29 133.7 357 28.3
AUR62016577 Chenopodium quinoa HOM05D000107 ORTHO05D010932 8.5e-29 132.5 395 27.1
AUR62002886 Chenopodium quinoa HOM05D000107 ORTHO05D010932 1.1e-28 132.1 279 30.5
AUR62025836 Chenopodium quinoa HOM05D000107 ORTHO05D010932 3.2e-28 130.6 238 33.2
AUR62041359 Chenopodium quinoa HOM05D000107 ORTHO05D010932 4.2e-28 130.2 264 29.9
AUR62042470 Chenopodium quinoa HOM05D000107 ORTHO05D010932 4.2e-28 130.2 245 32.7
Hund22765 Selenicereus undatus HOM05D000185 ORTHO05D000105 7.9e-27 125.9 197 38.1
FvH4_3g22812 Fragaria vesca HOM05D023520 ORTHO05D025365 2.3e-26 124.4 256 30.1
Sc08g0006040 Simmondsia chinensis HOM05D008654 ORTHO05D010476 1.5e-25 121.7 240 35.0
Sc17g0002790 Simmondsia chinensis HOM05D008654 ORTHO05D010476 2.6e-25 120.9 242 31.4
AUR62042986 Chenopodium quinoa HOM05D000107 ORTHO05D010932 7.4e-25 119.4 252 33.3
EL10Ac5g11849 Beta vulgaris HOM05D000107 ORTHO05D000062 2.2e-24 117.9 354 28.5
AUR62040134 Chenopodium quinoa HOM05D000107 ORTHO05D010932 3.7e-24 117.1 285 28.8
Hund22860 Selenicereus undatus HOM05D000107 ORTHO05D010932 7.0e-23 112.8 214 31.8
Sc14g0003090 Simmondsia chinensis HOM05D008654 ORTHO05D010476 9.1e-23 112.5 235 32.3
Sc09g0008760 Simmondsia chinensis HOM05D008654 ORTHO05D010476 1.2e-22 112.1 259 30.9
AUR62002722 Chenopodium quinoa HOM05D009516 ORTHO05D010476 1.3e-21 108.6 245 30.6
Hund03722 Selenicereus undatus HOM05D000107 ORTHO05D010932 2.9e-21 107.5 223 30.9
AUR62015304 Chenopodium quinoa HOM05D000107 ORTHO05D010932 8.5e-21 105.9 213 32.4
Hund15401 Selenicereus undatus HOM05D008654 ORTHO05D010476 1.5e-20 105.1 124 45.2
AUR62028478 Chenopodium quinoa HOM05D000107 ORTHO05D010932 1.9e-20 104.8 207 30.4
Glyma.08G123400 Glycine max HOM05D008291 ORTHO05D000669 1.0e-18 99.0 303 26.4
Sopen09g001250 Solanum pennellii HOM05D008291 ORTHO05D000669 1.4e-18 98.6 284 27.1
AUR62034555 Chenopodium quinoa HOM05D009516 ORTHO05D010476 1.5e-17 95.1 180 33.3
Rhsim03G0202300 Rhododendron simsii HOM05D017301 ORTHO05D000669 1.5e-17 95.1 324 27.2
Sc17g0003270 Simmondsia chinensis HOM05D008654 ORTHO05D010476 2.0e-17 94.7 96 56.2
AUR62012476 Chenopodium quinoa HOM05D009516 ORTHO05D010476 7.4e-17 92.8 219 29.7
AUR62034130 Chenopodium quinoa HOM05D000107 ORTHO05D010932 7.4e-17 92.8 238 27.7
AUR62042483 Chenopodium quinoa HOM05D000107 ORTHO05D010932 9.7e-17 92.4 232 28.9
QL93p0093_0054 Quercus lobata HOM05D003120 ORTHO05D003568 9.7e-17 92.4 296 24.0
Glyma.05G165700 Glycine max HOM05D008291 ORTHO05D000669 1.3e-16 92.0 281 27.0
VMungo0251G2604 Vigna mungo HOM05D008291 ORTHO05D003568 2.8e-16 90.9 265 25.7
Sc11g0006680 Simmondsia chinensis HOM05D008654 ORTHO05D010476 3.7e-16 90.5 80 51.2
Lj1g0021760 Lotus japonicus HOM05D008291 ORTHO05D003568 6.3e-16 89.7 266 24.4
TWI38G2136 Tripterygium wilfordii HOM05D003120 ORTHO05D000669 6.3e-16 89.7 315 26.3
AUR62015848 Chenopodium quinoa HOM05D009516 ORTHO05D010476 8.2e-16 89.4 183 31.1
EL10Ac8g19925 Beta vulgaris HOM05D000107 ORTHO05D000062 1.1e-15 89.0 128 36.7
AUR62003344 Chenopodium quinoa HOM05D000107 ORTHO05D010932 1.1e-15 89.0 242 27.7
Phvul.002G246000 Phaseolus vulgaris HOM05D008291 ORTHO05D003568 1.1e-15 89.0 283 25.8
RcHm_v2.0_Chr4g0402051 Rosa chinensis HOM05D000791 ORTHO05D000669 1.1e-15 89.0 220 27.7
AUR62038581 Chenopodium quinoa HOM05D000107 ORTHO05D010932 1.4e-15 88.6 270 27.0
arahy.Tifrunner.gnm1.ann1.EW3BSR Arachis hypogaea HOM05D008291 ORTHO05D000669 1.8e-15 88.2 288 26.7
arahy.Tifrunner.gnm1.ann1.TSWN09 Arachis hypogaea HOM05D008291 ORTHO05D000669 1.8e-15 88.2 288 26.7
Ca_17856_v3 Cicer arietinum L. HOM05D008291 ORTHO05D003568 3.1e-15 87.4 304 24.7
Sc10g0008320 Simmondsia chinensis HOM05D008654 ORTHO05D010476 3.1e-15 87.4 137 38.0
AUR62032700 Chenopodium quinoa HOM05D009516 ORTHO05D010476 4.1e-15 87.0 130 36.9
Hund18201 Selenicereus undatus HOM05D000185 ORTHO05D010932 4.1e-15 87.0 291 27.8
Hund20796 Selenicereus undatus HOM05D008654 ORTHO05D010476 4.1e-15 87.0 95 47.4
Lj4g0027394 Lotus japonicus HOM05D008291 ORTHO05D003568 7.0e-15 86.3 277 23.8
TWI23G0253 Tripterygium wilfordii HOM05D003120 ORTHO05D003568 7.0e-15 86.3 239 27.2
Ah.16g107310 Amaranthus hybridus HOM05D000107 ORTHO05D010932 1.2e-14 85.5 263 26.6
AUR62034756 Chenopodium quinoa HOM05D000107 ORTHO05D010932 1.2e-14 85.5 119 37.8
EL10As4g23432 Beta vulgaris HOM05D000107 ORTHO05D010932 1.6e-14 85.1 158 32.9
Sc21g0001490 Simmondsia chinensis HOM05D008654 ORTHO05D010476 2.0e-14 84.7 49 89.8
CiPaw.14G126400 Carya illinoinensis HOM05D003120 ORTHO05D003568 3.5e-14 84.0 291 23.0
AUR62021541 Chenopodium quinoa HOM05D009516 ORTHO05D010476 5.9e-14 83.2 70 54.3
AUR62022208 Chenopodium quinoa HOM05D009516 ORTHO05D010476 5.9e-14 83.2 70 54.3
AUR62041237 Chenopodium quinoa HOM05D009516 ORTHO05D010476 5.9e-14 83.2 70 54.3
Peaxi162Scf00436g00007 Petunia axillaris HOM05D003120 ORTHO05D003568 5.9e-14 83.2 213 25.4
AUR62021362 Chenopodium quinoa HOM05D009516 ORTHO05D010476 7.7e-14 82.8 70 54.3
TPR.G6754 Trifolium pratense HOM05D008291 ORTHO05D003568 1.0e-13 82.4 233 25.8
Sc14g0004940 Simmondsia chinensis HOM05D008654 ORTHO05D010476 1.3e-13 82.0 100 42.0
Cfa009670 Carpinus fangiana HOM05D003120 ORTHO05D003568 1.7e-13 81.6 329 22.5
Sc19g0004530 Simmondsia chinensis HOM05D008654 ORTHO05D010476 1.7e-13 81.6 90 44.4
Sc02g0005120 Simmondsia chinensis HOM05D008654 ORTHO05D010476 2.2e-13 81.3 88 43.2
vmacro17806 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 2.2e-13 81.3 191 27.7
Peaxi162Scf00131g00120 Petunia axillaris HOM05D003120 ORTHO05D003568 2.9e-13 80.9 257 24.9
Sc26g0002460 Simmondsia chinensis HOM05D008654 ORTHO05D010476 5.0e-13 80.1 80 50.0
AUR62036302 Chenopodium quinoa HOM05D009516 ORTHO05D010476 6.5e-13 79.7 89 42.7
vmacro01281 Vaccinium macrocarpon HOM05D017301 ORTHO05D000669 1.1e-12 79.0 250 25.6
AUR62026455 Chenopodium quinoa HOM05D007453 ORTHO05D009223 1.9e-12 78.2 76 53.9
COL.COLO4_21469 Corchorus olitorius HOM05D003120 ORTHO05D003568 3.2e-12 77.4 254 25.2
Ah.16g109640 Amaranthus hybridus HOM05D000107 ORTHO05D010932 4.2e-12 77.0 117 30.8
TWI18G1095 Tripterygium wilfordii HOM05D003120 ORTHO05D003568 7.2e-12 76.3 271 25.8
AUR62023814 Chenopodium quinoa HOM05D009516 ORTHO05D010476 9.4e-12 75.9 70 48.6
RcHm_v2.0_Chr4g0385011 Rosa chinensis HOM05D008705 ORTHO05D000669 1.2e-11 75.5 303 24.4
AUR62042776 Chenopodium quinoa HOM05D009516 ORTHO05D010476 2.1e-11 74.7 70 48.6
Sc05g0004570 Simmondsia chinensis HOM05D008654 ORTHO05D010476 2.1e-11 74.7 63 54.0
Sc08g0001890 Simmondsia chinensis HOM05D028797 ORTHO05D030612 2.1e-11 74.7 76 40.8
TWI73G1228 Tripterygium wilfordii HOM05D003120 ORTHO05D003568 2.7e-11 74.3 271 25.5
FAN09G3738 Fragaria x ananassa HOM05D008705 ORTHO05D001863 3.6e-11 73.9 249 26.1
Hund12899 Selenicereus undatus HOM05D000107 ORTHO05D010932 4.7e-11 73.6 120 39.2
Sc25g0003070 Simmondsia chinensis HOM05D028797 ORTHO05D030612 6.1e-11 73.2 71 40.8
vmacro23182 Vaccinium macrocarpon HOM05D008549 ORTHO05D010234 6.1e-11 73.2 227 27.3
Prupe.1G578800 Prunus persica HOM05D005763 ORTHO05D005970 2.3e-10 71.2 231 26.0
FAN10G3855 Fragaria x ananassa HOM05D008705 ORTHO05D000669 3.0e-10 70.9 304 24.0
Solyc09g005280.3 Solanum lycopersicum HOM05D008291 ORTHO05D000669 3.0e-10 70.9 201 27.4
FAN10G2090 Fragaria x ananassa HOM05D008705 ORTHO05D000669 8.8e-10 69.3 258 24.4
Rhsim10G0213800 Rhododendron simsii HOM05D008549 ORTHO05D010234 8.8e-10 69.3 181 26.5
Sc01g0004430 Simmondsia chinensis HOM05D008654 ORTHO05D010476 8.8e-10 69.3 74 47.3
TWI73G0990 Tripterygium wilfordii HOM05D003120 ORTHO05D000669 8.8e-10 69.3 237 27.0
TPR.G36323 Trifolium pratense HOM05D008291 ORTHO05D003568 1.2e-09 68.9 104 35.6
EL10Ac4g09876 Beta vulgaris HOM05D000107 ORTHO05D010932 5.7e-09 66.6 77 45.5
Nitab4.5_0003517g0020 Nicotiana tabacum HOM05D003120 ORTHO05D003568 5.7e-09 66.6 224 22.8
CSS0006329 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 9.8e-09 65.9 152 29.6
Oeu006554.1 Olea europaea HOM05D017951 ORTHO05D020916 1.3e-08 65.5 310 25.2
Ah.16g109650 Amaranthus hybridus HOM05D000107 ORTHO05D010932 1.7e-08 65.1 119 35.3
Sc04g0004200 Simmondsia chinensis HOM05D008654 ORTHO05D010476 1.7e-08 65.1 119 32.8
Rhsim09G0060200 Rhododendron simsii HOM05D008549 ORTHO05D010234 2.8e-08 64.3 141 27.0
CSS0015098 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D000385 4.8e-08 63.5 194 24.7
CSS0033268 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 4.8e-08 63.5 352 21.6
CSS0035442 Camellia sinensis var. sinensis HOM05D001309 ORTHO05D005970 4.8e-08 63.5 293 24.9
Sc23g0004280 Simmondsia chinensis HOM05D008654 ORTHO05D010476 4.8e-08 63.5 74 40.5
CSS0047376 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 6.3e-08 63.2 355 20.8
Peaxi162Scf01079g00217 Petunia axillaris HOM05D003120 ORTHO05D003568 6.3e-08 63.2 140 27.9
Rhsim13G0228900 Rhododendron simsii HOM05D001309 ORTHO05D000385 6.3e-08 63.2 149 28.2
AUR62026517 Chenopodium quinoa HOM05D009516 ORTHO05D010476 8.3e-08 62.8 55 56.4
CSS0004685 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.1e-07 62.4 352 21.6
CSS0008205 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 1.1e-07 62.4 352 21.6
Sc11g0003560 Simmondsia chinensis HOM05D008654 ORTHO05D010476 1.4e-07 62.0 77 35.1
EL10Ac9g20800 Beta vulgaris HOM05D003888 ORTHO05D007163 1.8e-07 61.6 154 28.6
COL.COLO4_24475 Corchorus olitorius HOM05D003120 ORTHO05D003568 1.8e-07 61.6 289 22.5
FAN20G1055 Fragaria x ananassa HOM05D008705 ORTHO05D001863 1.8e-07 61.6 300 24.3
Lj1A283G17 Lonicera japonica HOM05D008705 ORTHO05D000669 1.8e-07 61.6 216 23.6
Hund04217 Selenicereus undatus HOM05D008654 ORTHO05D010476 1.8e-07 61.6 61 49.2
Sc02g0004720 Simmondsia chinensis HOM05D008654 ORTHO05D010476 2.4e-07 61.2 58 48.3
CSS0034332 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 3.1e-07 60.8 352 21.6
Nitab4.5_0002512g0010 Nicotiana tabacum HOM05D003120 ORTHO05D003568 3.1e-07 60.8 244 24.6
Nitab4.5_0005770g0030 Nicotiana tabacum HOM05D009290 ORTHO05D009597 3.1e-07 60.8 182 28.6
PSO541G0763 Papaver somniferum HOM05D001309 ORTHO05D000385 3.1e-07 60.8 175 28.6
Peaxi162Scf00091g00169 Petunia axillaris HOM05D003120 ORTHO05D003568 3.1e-07 60.8 200 23.5
Sc18g0005710 Simmondsia chinensis HOM05D008654 ORTHO05D010476 3.1e-07 60.8 76 44.7
Rhsim04G0116500 Rhododendron simsii HOM05D008549 ORTHO05D010234 4.1e-07 60.5 91 33.0
CSS0021747 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 5.4e-07 60.1 352 21.3
CSS0029753 Camellia sinensis var. sinensis HOM05D007798 ORTHO05D009882 5.4e-07 60.1 355 22.0
AUR62028470 Chenopodium quinoa HOM05D001385 ORTHO05D008760 5.4e-07 60.1 148 26.4
EL10Ac2g03313 Beta vulgaris HOM05D000107 ORTHO05D000062 1.2e-06 58.9 149 28.9
EL10Ac2g03949 Beta vulgaris HOM05D009516 ORTHO05D010476 1.2e-06 58.9 69 44.9
PSO063G3441 Papaver somniferum HOM05D001309 ORTHO05D000385 1.6e-06 58.5 118 29.7
PGR004G1992 Punica granatum HOM05D000791 ORTHO05D000669 2.0e-06 58.2 299 22.1
Sc06g0004390 Simmondsia chinensis HOM05D028797 ORTHO05D030612 2.0e-06 58.2 51 49.0
Nitab4.5_0000248g0040 Nicotiana tabacum HOM05D003120 ORTHO05D003568 2.7e-06 57.8 326 22.1
Rhsim11G0122900 Rhododendron simsii HOM05D001309 ORTHO05D005970 2.7e-06 57.8 101 30.7
Migut.B01385 Erythranthe guttata HOM05D023261 ORTHO05D000669 3.5e-06 57.4 270 23.0
Rhsim01G0063300 Rhododendron simsii HOM05D007798 ORTHO05D009882 3.5e-06 57.4 281 21.4
Lsat_1_v5_gn_8_112821 Lactuca sativa HOM05D009270 ORTHO05D011457 4.5e-06 57.0 209 23.4
Psat7g230640 Pisum sativum HOM05D008859 ORTHO05D007166 4.5e-06 57.0 258 21.3
EL10Ac2g04270 Beta vulgaris HOM05D009516 ORTHO05D010476 5.9e-06 56.6 78 41.0
EL10Ac6g13764 Beta vulgaris HOM05D009516 ORTHO05D010476 5.9e-06 56.6 69 43.5
Peaxi162Scf00473g00101 Petunia axillaris HOM05D003120 ORTHO05D003568 5.9e-06 56.6 178 24.2
RcHm_v2.0_Chr0c17g0499961 Rosa chinensis HOM05D008705 ORTHO05D000669 5.9e-06 56.6 95 30.5
Sc10g0005990 Simmondsia chinensis HOM05D008654 ORTHO05D010476 7.7e-06 56.2 82 36.6


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