Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc14g0007890 Simmondsia chinensis HOM05D012529 ORTHO05D013419 1.8e-142 509.2 260 100.0
Sc14g0007880 Simmondsia chinensis HOM05D019376 ORTHO05D013419 5.7e-35 152.1 260 41.2
Sc14g0007830 Simmondsia chinensis HOM05D019376 ORTHO05D013419 5.0e-31 139.0 240 39.6
Ah.02g126740 Amaranthus hybridus HOM05D012529 ORTHO05D013419 5.7e-27 125.6 168 41.7
AUR62007880 Chenopodium quinoa HOM05D012529 ORTHO05D013419 2.8e-26 123.2 172 40.1
Sc14g0007920 Simmondsia chinensis HOM05D019376 ORTHO05D013419 6.3e-26 122.1 232 37.9
AUR62007882 Chenopodium quinoa HOM05D012529 ORTHO05D013419 1.8e-25 120.6 168 41.1
AUR62003065 Chenopodium quinoa HOM05D012529 ORTHO05D013419 7.0e-25 118.6 251 35.1
AUR62003069 Chenopodium quinoa HOM05D012529 ORTHO05D013419 7.0e-25 118.6 251 35.1
EL10Ac6g14690 Beta vulgaris HOM05D012529 ORTHO05D013419 1.6e-24 117.5 173 41.6
Sc14g0007860 Simmondsia chinensis HOM05D019376 ORTHO05D013419 2.0e-19 100.5 254 34.6
Sc04g0005760 Simmondsia chinensis HOM05D012529 ORTHO05D013419 6.4e-18 95.5 107 51.4
AUR62003066 Chenopodium quinoa HOM05D012529 ORTHO05D013419 1.2e-16 91.3 130 39.2
AUR62003068 Chenopodium quinoa HOM05D012529 ORTHO05D013419 2.7e-16 90.1 160 32.5
AUR62007881 Chenopodium quinoa HOM05D012529 ORTHO05D013419 1.8e-12 77.4 131 35.1
FvH4_4g27942 Fragaria vesca HOM05D000003 ORTHO05D000022 1.2e-11 74.7 178 32.6
FvH4_6g16961 Fragaria vesca HOM05D000003 ORTHO05D000022 1.7e-10 70.9 178 32.0
EL10Ac6g14686 Beta vulgaris HOM05D012529 ORTHO05D013419 3.7e-10 69.7 65 55.4
Nitab4.5_0000692g0240 Nicotiana tabacum HOM05D000155 ORTHO05D000022 5.4e-09 65.9 174 29.9
Atru.chr2.2033 Acer truncatum HOM05D000003 ORTHO05D000167 1.2e-08 64.7 109 35.8
FvH4_5g35851 Fragaria vesca HOM05D000003 ORTHO05D000022 1.2e-08 64.7 155 34.8
QL06p048711 Quercus lobata HOM05D000027 ORTHO05D000066 1.2e-08 64.7 178 27.0
FvH4_6g19462 Fragaria vesca HOM05D000003 ORTHO05D000022 1.6e-08 64.3 133 35.3
MBI11_g05090_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 6.0e-08 62.4 169 33.7
RcHm_v2.0_Chr5g0021171 Rosa chinensis HOM05D003515 ORTHO05D004347 6.0e-08 62.4 186 32.3
Ciclev10027161m.g Citrus clementina HOM05D000003 ORTHO05D000167 1.3e-07 61.2 165 25.5
Nitab4.5_0004849g0010 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.7e-07 60.8 162 30.9
Thecc.08G073600 Theobroma cacao HOM05D000650 ORTHO05D010020 1.7e-07 60.8 132 34.1
Lj3g0008362 Lotus japonicus HOM05D000003 ORTHO05D000004 2.3e-07 60.5 226 29.2
COL.COLO4_35274 Corchorus olitorius HOM05D000650 ORTHO05D010020 3.0e-07 60.1 159 32.7
FvH4_6g18361 Fragaria vesca HOM05D000003 ORTHO05D000022 3.0e-07 60.1 166 30.7
CAN.G193.7 Capsicum annuum HOM05D000650 ORTHO05D010020 5.0e-07 59.3 132 35.6
Atru.chr2.2758 Acer truncatum HOM05D000003 ORTHO05D000167 8.6e-07 58.5 162 31.5
Atru.chr3.1768 Acer truncatum HOM05D000003 ORTHO05D000167 1.1e-06 58.2 140 27.9
FvH4_3g05211 Fragaria vesca HOM05D000003 ORTHO05D000022 1.1e-06 58.2 155 29.7
MBI03_g12752_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 1.1e-06 58.2 170 31.8
Nitab4.5_0006852g0020 Nicotiana tabacum HOM05D000155 ORTHO05D000022 1.1e-06 58.2 153 30.7
QL02p011410 Quercus lobata HOM05D000003 ORTHO05D000004 1.5e-06 57.8 180 30.0
COL.COLO4_27602 Corchorus olitorius HOM05D013144 ORTHO05D009449 1.9e-06 57.4 136 32.4
FvH4_6g42141 Fragaria vesca HOM05D000003 ORTHO05D000022 1.9e-06 57.4 133 32.3
Peaxi162Scf01112g00129 Petunia axillaris HOM05D000650 ORTHO05D010020 1.9e-06 57.4 165 30.9
Gohir.D06G030200 Gossypium hirsutum HOM05D000650 ORTHO05D010020 2.5e-06 57.0 149 31.5
Psat2g064560 Pisum sativum HOM05D000650 ORTHO05D010020 2.5e-06 57.0 132 34.8
FvH4_5g15581 Fragaria vesca HOM05D000003 ORTHO05D000022 3.3e-06 56.6 153 34.6
Gorai.010G033200 Gossypium raimondii HOM05D000650 ORTHO05D010020 3.3e-06 56.6 149 31.5
QL11p050659 Quercus lobata HOM05D002097 ORTHO05D002248 3.3e-06 56.6 153 30.1
Lj4A86T98 Lonicera japonica HOM05D000650 ORTHO05D010020 4.3e-06 56.2 138 34.8
Atru.chr6.1288 Acer truncatum HOM05D000003 ORTHO05D000004 5.6e-06 55.8 164 29.9
Nitab4.5_0000771g0040 Nicotiana tabacum HOM05D000650 ORTHO05D010020 5.6e-06 55.8 148 33.8
Psat2g065480 Pisum sativum HOM05D000650 ORTHO05D010020 5.6e-06 55.8 132 34.8
SEGI_15436 Sequoiadendron giganteum HOM05D001690 ORTHO05D013089 5.6e-06 55.8 147 33.3
MBI05_g02408_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 7.3e-06 55.5 229 28.8
Nitab4.5_0009446g0020 Nicotiana tabacum HOM05D000650 ORTHO05D010020 7.3e-06 55.5 135 33.3
TWI32G0745 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 7.3e-06 55.5 164 28.7
Dinv42596 Davidia involucrata HOM05D000650 ORTHO05D010020 9.5e-06 55.1 132 35.6
FvH4_2g04612 Fragaria vesca HOM05D008133 ORTHO05D009449 9.5e-06 55.1 178 28.1


User provided reference genes

Program Settings