Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc14g0007070 Simmondsia chinensis HOM05D005638 ORTHO05D006913 1.8e-240 835.5 422 100.0
Hund25015 Selenicereus undatus HOM05D005638 ORTHO05D006913 1.1e-181 640.2 420 77.9
EL10Ac6g14273 Beta vulgaris HOM05D005638 ORTHO05D006913 2.1e-175 619.4 415 74.2
CSS0002078 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 5.1e-174 614.8 413 73.6
CSS0005399 Camellia sinensis var. sinensis HOM05D005638 ORTHO05D006913 1.1e-173 613.6 413 73.6
Ciclev10015376m.g Citrus clementina HOM05D005638 ORTHO05D006913 9.5e-173 610.5 413 75.3
GSVIVG01011806001 Vitis vinifera HOM05D005638 ORTHO05D006913 2.0e-170 602.8 412 73.3
Potri.008G126300 Populus trichocarpa HOM05D005638 ORTHO05D006913 2.6e-170 602.4 413 72.2
Eucgr.H00037 Eucalyptus grandis HOM05D005638 ORTHO05D006913 4.9e-169 598.2 410 70.7
Sed0003483 Sechium edule HOM05D005638 ORTHO05D006913 1.9e-168 596.3 407 74.2
Prupe.1G319900 Prunus persica HOM05D005638 ORTHO05D006913 7.1e-168 594.3 413 72.2
MELO3C034164.2 Cucumis melo HOM05D005638 ORTHO05D006913 2.7e-167 592.4 412 72.6
CsaV3_5G010590 Cucumis sativus L. HOM05D005638 ORTHO05D006913 2.7e-167 592.4 410 72.7
QL01p003053 Quercus lobata HOM05D005638 ORTHO05D006913 3.5e-167 592.0 435 70.1
PGR119G2299 Punica granatum HOM05D005638 ORTHO05D006913 6.0e-167 591.3 410 70.7
Haze_00683 Corylus avellana HOM05D005638 ORTHO05D006913 3.9e-166 588.6 420 71.2
Nn4g24022 Nelumbo nucifera HOM05D005638 ORTHO05D006913 6.6e-166 587.8 415 70.6
ClCG07G004650 Citrullus lanatus HOM05D005638 ORTHO05D006913 1.1e-165 587.0 419 72.1
FvH4_4g26400 Fragaria vesca HOM05D005638 ORTHO05D006913 2.5e-165 585.9 417 70.5
Hma1.2p1_0882F.1_g232180 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 4.3e-165 585.1 404 72.0
FAN12G2479 Fragaria x ananassa HOM05D005638 ORTHO05D006913 5.6e-165 584.7 417 70.3
CAN.G1489.15 Capsicum annuum HOM05D005638 ORTHO05D006913 9.6e-165 583.9 411 69.8
Sabra08G0095100 Salix brachista HOM05D005638 ORTHO05D006913 9.6e-165 583.9 404 71.3
FAN12G3267 Fragaria x ananassa HOM05D005638 ORTHO05D006913 1.6e-164 583.2 417 70.3
Cc11_g09280 Coffea canephora HOM05D005638 ORTHO05D006913 3.6e-164 582.0 413 70.7
Thecc.05G134700 Theobroma cacao HOM05D005638 ORTHO05D006913 6.2e-164 581.3 411 72.3
TWI75G0624 Tripterygium wilfordii HOM05D005638 ORTHO05D006913 1.8e-163 579.7 415 69.9
Gorai.013G001800 Gossypium raimondii HOM05D005638 ORTHO05D006913 3.1e-163 578.9 411 70.6
DCAR_001932 Daucus carota HOM05D005638 ORTHO05D006913 4.0e-163 578.6 424 68.4
ECA246G4189 Erigeron canadensis HOM05D005638 ORTHO05D006913 5.2e-163 578.2 415 70.1
PGSC0003DMG401030517 Solanum tuberosum HOM05D005638 ORTHO05D006913 1.5e-162 576.6 412 68.4
Solyc05g008540.3 Solanum lycopersicum HOM05D005638 ORTHO05D006913 2.6e-162 575.9 414 68.1
COL.COLO4_22224 Corchorus olitorius HOM05D005638 ORTHO05D006913 3.4e-162 575.5 413 69.7
arahy.Tifrunner.gnm1.ann1.NRC6UQ Arachis hypogaea HOM05D005638 ORTHO05D006913 7.6e-162 574.3 417 68.3
Sopen05g004380 Solanum pennellii HOM05D005638 ORTHO05D006913 1.3e-161 573.5 415 68.2
MSTRG.2199 Avicennia marina HOM05D005638 ORTHO05D006913 2.2e-161 572.8 413 70.9
Gohir.A13G000300 Gossypium hirsutum HOM05D005638 ORTHO05D006913 2.9e-161 572.4 411 70.1
arahy.Tifrunner.gnm1.ann1.CLD3MC Arachis hypogaea HOM05D005638 ORTHO05D006913 3.8e-161 572.0 415 68.4
HanXRQChr17g0534901 Helianthus annuus HOM05D005638 ORTHO05D006913 4.2e-160 568.5 412 69.4
MD16G1034700 Malus domestica HOM05D005638 ORTHO05D006913 7.1e-160 567.8 419 68.7
AUR62042716 Chenopodium quinoa HOM05D005638 ORTHO05D006913 9.3e-160 567.4 448 66.5
Lalb_Chr02g0145641 Lupinus albus HOM05D005638 ORTHO05D006913 2.7e-159 565.8 412 68.0
Peaxi162Scf00205g01130 Petunia axillaris HOM05D005638 ORTHO05D006913 6.0e-159 564.7 413 69.0
Lj5g0007245 Lotus japonicus HOM05D005638 ORTHO05D006913 1.3e-158 563.5 412 68.7
CANSAT01G0033 Cannabis sativa HOM05D005638 ORTHO05D006913 3.0e-158 562.4 411 68.6
Lsat_1_v5_gn_3_11020 Lactuca sativa HOM05D005638 ORTHO05D006913 3.0e-158 562.4 417 68.3
FAN07G1772 Fragaria x ananassa HOM05D005638 ORTHO05D006913 6.6e-158 561.2 460 63.7
Psat6g222760 Pisum sativum HOM05D005638 ORTHO05D006913 8.7e-158 560.8 411 68.9
Oeu064207.2 Olea europaea HOM05D005638 ORTHO05D006913 1.9e-157 559.7 456 64.5
Migut.E00391 Erythranthe guttata HOM05D005638 ORTHO05D006913 2.5e-157 559.3 413 68.0
Nitab4.5_0000350g0120 Nicotiana tabacum HOM05D005638 ORTHO05D006913 9.6e-157 557.4 419 67.1
Carub.0005s0010 Capsella rubella HOM05D005638 ORTHO05D006913 1.3e-156 557.0 410 67.1
Sp2g12590 Schrenkiella parvula HOM05D005638 ORTHO05D006913 3.6e-156 555.4 412 65.8
Medtr1g109100 Medicago truncatula HOM05D005638 ORTHO05D006913 4.8e-156 555.1 412 68.0
RcHm_v2.0_Chr4g0434031 Rosa chinensis HOM05D005638 ORTHO05D006913 6.2e-156 554.7 417 66.7
THA.LOC104805050 Tarenaya hassleriana HOM05D005638 ORTHO05D006913 2.4e-155 552.7 410 66.8
BcaC06g31332 Brassica carinata HOM05D005638 ORTHO05D006913 3.1e-155 552.4 412 65.5
AL5G10070 Arabidopsis lyrata HOM05D005638 ORTHO05D006913 4.0e-155 552.0 410 66.1
CARHR143670 Cardamine hirsuta HOM05D005638 ORTHO05D006913 5.3e-155 551.6 410 65.9
Thhalv10000894m.g Eutrema salsugineum HOM05D005638 ORTHO05D006913 6.9e-155 551.2 418 65.3
Phvul.007G034200 Phaseolus vulgaris HOM05D005638 ORTHO05D006913 2.0e-154 549.7 415 66.7
Ca_30212_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 3.4e-154 548.9 406 67.7
Manes.10G073400 Manihot esculenta HOM05D005638 ORTHO05D006913 2.9e-153 545.8 412 67.0
A06p44660 Brassica napus HOM05D005638 ORTHO05D006913 1.6e-151 540.0 441 61.7
vmacro10617 Vaccinium macrocarpon HOM05D005638 ORTHO05D006913 3.5e-151 538.9 457 61.1
Aqoxy5G03877 Aquilegia oxysepala HOM05D005638 ORTHO05D006913 6.0e-151 538.1 410 65.6
C07p31590 Brassica napus HOM05D005638 ORTHO05D006913 1.3e-150 537.0 441 61.7
Glyma.10G268100 Glycine max HOM05D005638 ORTHO05D006913 2.3e-150 536.2 415 66.5
BcaC06g34215 Brassica carinata HOM05D005638 ORTHO05D006913 5.1e-150 535.0 441 61.5
CiPaw.05G245200 Carya illinoinensis HOM05D005638 ORTHO05D006913 5.1e-150 535.0 412 66.7
Glyma.20G123000 Glycine max HOM05D005638 ORTHO05D006913 6.7e-150 534.6 411 67.2
AT2G01120 Arabidopsis thaliana HOM05D005638 ORTHO05D006913 3.7e-148 528.9 411 63.7
Duzib106G1906 Durio zibethinus HOM05D005638 ORTHO05D006913 6.2e-148 528.1 411 65.9
PSO017G2298 Papaver somniferum HOM05D005638 ORTHO05D006913 5.3e-147 525.0 401 66.1
PSO478G2841 Papaver somniferum HOM05D005638 ORTHO05D006913 5.3e-147 525.0 401 66.3
Lj2C166G5 Lonicera japonica HOM05D005638 ORTHO05D006913 3.4e-146 522.3 447 61.5
Aa31LG2G8760 Aethionema arabicum HOM05D005638 ORTHO05D006913 8.4e-145 517.7 412 63.3
PSO782G2730 Papaver somniferum HOM05D005638 ORTHO05D006913 1.6e-143 513.5 401 64.3
FAN22G2072 Fragaria x ananassa HOM05D005638 ORTHO05D006913 2.3e-142 509.6 447 61.5
ATR0691G289 Amborella trichopoda HOM05D005638 ORTHO05D006913 7.4e-141 504.6 422 62.1
HPP92_020141 Vanilla planifolia HOM05D005638 ORTHO05D006913 4.8e-140 501.9 416 59.1
Cpa.g.sc65.90 Carica papaya HOM05D005638 ORTHO05D006913 1.1e-139 500.7 382 67.5
Nitab4.5_0013146g0020 Nicotiana tabacum HOM05D005638 ORTHO05D006913 1.1e-139 500.7 478 56.7
FAN17G1216 Fragaria x ananassa HOM05D005638 ORTHO05D006913 5.3e-139 498.4 445 60.4
Os01g0683400 Oryza sativa ssp. japonica HOM05D005638 ORTHO05D006913 6.9e-139 498.0 456 55.3
BcaB07g30423 Brassica carinata HOM05D005638 ORTHO05D006913 2.9e-137 492.7 437 59.0
SalBow8G2600 Salvia bowleyana HOM05D005638 ORTHO05D006913 7.1e-136 488.0 415 61.4
BraA06t27339Z Brassica rapa HOM05D005638 ORTHO05D006913 1.6e-135 486.9 415 59.0
SEGI_39107 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 1.8e-134 483.4 410 59.0
Atru.chr11.333 Acer truncatum HOM05D005638 ORTHO05D006913 8.7e-134 481.1 333 71.8
MBI10_g06749_MAGBIO Magnolia biondii HOM05D005638 ORTHO05D006913 1.3e-132 477.2 360 65.6
Dinv16164 Davidia involucrata HOM05D005638 ORTHO05D006913 4.1e-131 472.2 347 69.2
Gohir.D13G001900 Gossypium hirsutum HOM05D005638 ORTHO05D006913 6.9e-131 471.5 411 60.3
unitig_52.g17425 Utricularia gibba HOM05D005638 ORTHO05D006913 6.1e-127 458.4 416 57.0
Atru.chr11.340 Acer truncatum HOM05D005638 ORTHO05D006913 1.4e-126 457.2 305 76.1
VMungo0720G2401 Vigna mungo HOM05D005638 ORTHO05D006913 3.1e-123 446.0 333 66.4
Zm00001eb156550 Zea mays HOM05D005638 ORTHO05D006913 3.6e-119 432.6 409 56.2
Ah.03g138510 Amaranthus hybridus HOM05D005638 ORTHO05D006913 6.3e-116 421.8 289 73.4
TAR622G0052 Trochodendron aralioides HOM05D005638 ORTHO05D006913 6.3e-116 421.8 309 70.6
Rhsim11G0032100 Rhododendron simsii HOM05D005638 ORTHO05D006913 8.2e-108 394.8 286 68.9
Dinv04905 Davidia involucrata HOM05D005638 ORTHO05D006913 1.4e-102 377.5 412 52.4
Mapoly0031s0066 Marchantia polymorpha HOM05D005638 ORTHO05D006913 5.2e-102 375.6 409 51.6
Pp3c16_11150 Physcomitrium patens HOM05D005638 ORTHO05D006913 3.3e-101 372.9 414 51.0
CBR_g38777 Chara braunii HOM05D005638 ORTHO05D006913 4.2e-96 355.9 383 49.6
TPR.G31713 Trifolium pratense HOM05D005638 ORTHO05D006913 1.4e-94 350.9 264 68.9
Hma1.2p1_0882F.1_g232170 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 1.5e-93 347.4 211 82.0
Ca_23705_v3 Cicer arietinum L. HOM05D005638 ORTHO05D006913 1.3e-92 344.4 236 72.9
Cfa015815 Carpinus fangiana HOM05D005638 ORTHO05D006913 8.3e-92 341.7 211 80.6
SGA_v2.0_scaffold170G38821 Striga asiatica HOM05D005638 ORTHO05D006913 3.1e-91 339.7 257 68.5
AUR62014211 Chenopodium quinoa HOM05D005638 ORTHO05D006913 1.1e-88 331.3 363 52.9
A02p31700 Brassica napus HOM05D005638 ORTHO05D006913 1.7e-81 307.4 315 54.0
BcaC03g16999 Brassica carinata HOM05D005638 ORTHO05D006913 4.0e-78 296.2 242 62.0
AagrBONN_evm.TU.Sc2ySwM_344.3309 Anthoceros agrestis HOM05D005638 ORTHO05D006913 1.1e-72 278.1 364 45.1
C02p49080 Brassica napus HOM05D005638 ORTHO05D006913 4.3e-72 276.2 311 49.2
BolC2t10998H Brassica oleracea HOM05D005638 ORTHO05D006913 3.4e-69 266.5 249 55.0
PSO170G3371 Papaver somniferum HOM05D005638 ORTHO05D006913 7.3e-64 248.8 223 58.3
PRCOL_00001621 Prasinoderma coloniale HOM05D005638 ORTHO05D006913 7.1e-59 232.3 403 36.2
MD13G1032700 Malus domestica HOM05D005638 ORTHO05D006913 8.6e-57 225.3 166 69.3
Thecc.06G067600 Theobroma cacao HOM05D005638 ORTHO05D006913 2.4e-54 217.2 141 74.5
CDE11G0817 Ceratophyllum demersum HOM05D005638 ORTHO05D006913 3.0e-49 200.3 125 77.6
MD13G1032600 Malus domestica HOM05D005638 ORTHO05D006913 3.9e-49 199.9 150 66.0
SMO351G0247 Selaginella moellendorffii HOM05D005638 ORTHO05D006913 1.1e-48 198.4 404 34.9
SEGI_20204 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 2.8e-47 193.7 179 55.9
Hma1.2p1_0882F.1_g232190 Hydrangea macrophylla HOM05D005638 ORTHO05D006913 4.0e-46 189.9 137 65.7
MCO02G007 Micromonas commoda HOM05D005638 ORTHO05D006913 2.4e-38 164.1 306 36.3
BraA02t08176Z Brassica rapa HOM05D005638 ORTHO05D006913 1.6e-34 151.4 109 74.3
Rhsim11G0032000 Rhododendron simsii HOM05D005638 ORTHO05D006913 2.1e-34 151.0 151 53.6
TPR.G15740 Trifolium pratense HOM05D005638 ORTHO05D006913 6.9e-30 136.0 84 83.3
CDE11G0802 Ceratophyllum demersum HOM05D005638 ORTHO05D006913 5.8e-29 132.9 104 60.6
TPR.G7417 Trifolium pratense HOM05D005638 ORTHO05D006913 8.7e-25 119.0 94 63.8
Cfa022174 Carpinus fangiana HOM05D005638 ORTHO05D006913 5.6e-24 116.3 363 27.3
Cre17.g726500 Chlamydomonas reinhardtii HOM05D005638 ORTHO05D006913 2.0e-21 107.8 207 34.3
SEGI_29357 Sequoiadendron giganteum HOM05D005638 ORTHO05D006913 1.9e-19 101.3 95 50.5
Rhsim09G0101800 Rhododendron simsii HOM05D005638 ORTHO05D006913 1.8e-17 94.7 114 51.8
Rhsim09G0101700 Rhododendron simsii HOM05D005638 ORTHO05D006913 2.5e-16 90.9 79 55.7
SHI16222 Sapria himalayana HOM05D000030 ORTHO05D007344 4.8e-15 86.7 54 77.8
FAN28G2655 Fragaria x ananassa HOM05D005638 ORTHO05D006913 2.4e-14 84.3 65 58.5


User provided reference genes

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