Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc14g0007020 Simmondsia chinensis HOM05D006947 ORTHO05D008818 0.0e+00 1587.0 829 100.0
Sc14g0006260 Simmondsia chinensis HOM05D006947 ORTHO05D008818 0.0e+00 1566.2 831 98.9
Dinv28045 Davidia involucrata HOM05D006947 ORTHO05D008818 6.7e-279 964.1 846 63.7
EL10Ac6g14173 Beta vulgaris HOM05D006947 ORTHO05D008818 7.7e-267 924.1 847 60.3
CSS0036590 Camellia sinensis var. sinensis HOM05D006947 ORTHO05D008818 3.6e-264 915.2 842 61.0
AUR62039529 Chenopodium quinoa HOM05D006947 ORTHO05D008818 2.3e-263 912.5 842 59.3
AUR62014176 Chenopodium quinoa HOM05D006947 ORTHO05D008818 3.9e-263 911.8 861 58.3
Hma1.2p1_0330F.1_g127400 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 3.8e-258 895.2 773 63.8
GSVIVG01011706001 Vitis vinifera HOM05D006947 ORTHO05D008818 5.0e-258 894.8 791 61.4
Ah.03g137350 Amaranthus hybridus HOM05D006947 ORTHO05D008818 1.2e-256 890.2 843 58.2
Peaxi162Scf00376g00128 Petunia axillaris HOM05D006947 ORTHO05D008818 1.2e-256 890.2 806 61.4
Nitab4.5_0000282g0010 Nicotiana tabacum HOM05D006947 ORTHO05D008818 7.9e-256 887.5 820 60.6
Cfa014981 Carpinus fangiana HOM05D006947 ORTHO05D008818 4.4e-254 881.7 795 61.3
Gorai.002G176700 Gossypium raimondii HOM05D006947 ORTHO05D008818 1.4e-252 876.7 841 59.0
Hund24964 Selenicereus undatus HOM05D006947 ORTHO05D008818 1.4e-252 876.7 897 55.7
Sopen05g023090 Solanum pennellii HOM05D006947 ORTHO05D008818 1.8e-252 876.3 826 60.3
CiPaw.06G048400 Carya illinoinensis HOM05D006947 ORTHO05D008818 2.4e-252 875.9 793 61.5
COL.COLO4_13100 Corchorus olitorius HOM05D006947 ORTHO05D008818 3.1e-252 875.5 802 61.3
Solyc05g026560.3 Solanum lycopersicum HOM05D006947 ORTHO05D008818 3.1e-252 875.5 826 60.3
TWI74G1199 Tripterygium wilfordii HOM05D006947 ORTHO05D008818 3.1e-252 875.5 811 60.0
Cc11_g08260 Coffea canephora HOM05D006947 ORTHO05D008818 2.0e-251 872.8 792 60.5
DCAR_026786 Daucus carota HOM05D006947 ORTHO05D008818 5.9e-251 871.3 773 61.2
TAR622G0063 Trochodendron aralioides HOM05D006947 ORTHO05D008818 5.9e-251 871.3 858 57.8
Ciclev10014242m.g Citrus clementina HOM05D006947 ORTHO05D008818 7.7e-251 870.9 787 60.5
RcHm_v2.0_Chr4g0443581 Rosa chinensis HOM05D006947 ORTHO05D008818 1.0e-250 870.5 810 60.1
FAN07G0937 Fragaria x ananassa HOM05D006947 ORTHO05D008818 2.9e-250 869.0 841 59.3
Haze_10941 Corylus avellana HOM05D006947 ORTHO05D008818 1.5e-249 866.7 851 57.9
Potri.008G131900 Populus trichocarpa HOM05D006947 ORTHO05D008818 1.5e-249 866.7 854 57.4
MD16G1022800 Malus domestica HOM05D006947 ORTHO05D008818 6.7e-247 857.8 825 58.3
Gohir.D01G143300 Gossypium hirsutum HOM05D006947 ORTHO05D008818 7.5e-246 854.4 747 62.1
FAN12G3265 Fragaria x ananassa HOM05D006947 ORTHO05D008818 1.7e-245 853.2 860 57.9
MELO3C005295.2 Cucumis melo HOM05D006947 ORTHO05D008818 1.8e-244 849.7 781 61.2
Potri.010G110200 Populus trichocarpa HOM05D006947 ORTHO05D008818 9.1e-244 847.4 860 56.4
HanXRQChr12g0363561 Helianthus annuus HOM05D006947 ORTHO05D008818 1.6e-243 846.7 845 57.9
ClCG01G006350 Citrullus lanatus HOM05D006947 ORTHO05D008818 1.7e-242 843.2 777 60.7
Duzib251G0407 Durio zibethinus HOM05D006947 ORTHO05D008818 1.7e-242 843.2 864 56.9
Manes.17G080500 Manihot esculenta HOM05D006947 ORTHO05D008818 8.5e-242 840.9 822 56.4
Eucgr.B02936 Eucalyptus grandis HOM05D006947 ORTHO05D008818 3.2e-241 839.0 797 58.5
PGR102G1367 Punica granatum HOM05D006947 ORTHO05D008818 3.6e-240 835.5 793 58.1
Glyma.09G120400 Glycine max HOM05D006947 ORTHO05D008818 2.3e-239 832.8 795 57.7
Lalb_Chr10g0096001 Lupinus albus HOM05D006947 ORTHO05D008818 2.6e-238 829.3 798 58.8
CsaV3_5G028330 Cucumis sativus L. HOM05D006947 ORTHO05D008818 1.8e-236 823.2 777 60.1
Lj6A742T64 Lonicera japonica HOM05D006947 ORTHO05D008818 1.6e-235 820.1 791 58.5
Sabra10G0080600 Salix brachista HOM05D006947 ORTHO05D008818 3.5e-235 818.9 769 58.3
Phvul.003G022200 Phaseolus vulgaris HOM05D006947 ORTHO05D008818 1.7e-234 816.6 768 57.9
Sed0026926 Sechium edule HOM05D006947 ORTHO05D008818 8.5e-234 814.3 772 59.2
QL03p033900 Quercus lobata HOM05D006947 ORTHO05D008818 1.0e-231 807.4 844 54.9
Gohir.1Z015600 Gossypium hirsutum HOM05D006947 ORTHO05D008818 1.3e-229 800.4 841 56.0
FvH4_4g34070 Fragaria vesca HOM05D006947 ORTHO05D008818 2.8e-229 799.3 717 62.1
ECA233G0254 Erigeron canadensis HOM05D006947 ORTHO05D008818 4.1e-228 795.4 749 60.9
VMungo1215G1110 Vigna mungo HOM05D006947 ORTHO05D008818 5.9e-227 791.6 788 55.2
Atru.chr11.650 Acer truncatum HOM05D006947 ORTHO05D008818 3.8e-226 788.9 784 56.5
MSTRG.907 Avicennia marina HOM05D006947 ORTHO05D008818 1.9e-225 786.6 810 54.8
BcaB03g11927 Brassica carinata HOM05D006947 ORTHO05D008818 4.7e-224 781.9 807 55.8
arahy.Tifrunner.gnm1.ann1.573L1D Arachis hypogaea HOM05D006947 ORTHO05D008818 6.1e-224 781.6 749 58.7
CARHR023620 Cardamine hirsuta HOM05D006947 ORTHO05D008818 2.6e-222 776.2 778 56.2
arahy.Tifrunner.gnm1.ann1.8B134P Arachis hypogaea HOM05D006947 ORTHO05D008818 4.4e-222 775.4 790 56.3
Thhalv10006791m.g Eutrema salsugineum HOM05D006947 ORTHO05D008818 2.9e-221 772.7 779 56.6
Lsat_1_v5_gn_8_44260 Lactuca sativa HOM05D006947 ORTHO05D008818 8.3e-221 771.2 866 53.0
AL1G36850 Arabidopsis lyrata HOM05D006947 ORTHO05D008818 1.4e-220 770.4 754 57.4
BraA08t34762Z Brassica rapa HOM05D006947 ORTHO05D008818 1.6e-219 766.9 815 53.7
Sp1g20640 Schrenkiella parvula HOM05D006947 ORTHO05D008818 1.7e-218 763.5 841 53.4
AT1G23180 Arabidopsis thaliana HOM05D006947 ORTHO05D008818 2.3e-218 763.1 807 54.4
C08p21780 Brassica napus HOM05D006947 ORTHO05D008818 2.3e-218 763.1 814 53.9
BolC8t49817H Brassica oleracea HOM05D006947 ORTHO05D008818 3.9e-218 762.3 814 54.2
BcaC07g39188 Brassica carinata HOM05D006947 ORTHO05D008818 5.0e-218 761.9 814 54.2
Ca_12591_v3 Cicer arietinum L. HOM05D006947 ORTHO05D008818 5.0e-218 761.9 791 55.1
THA.LOC104822169 Tarenaya hassleriana HOM05D006947 ORTHO05D008818 5.0e-218 761.9 819 54.6
A08p28310 Brassica napus HOM05D006947 ORTHO05D008818 4.3e-217 758.8 812 54.1
Migut.L00588 Erythranthe guttata HOM05D006947 ORTHO05D008818 1.2e-216 757.3 792 56.1
CANSAT01G1138 Cannabis sativa HOM05D006947 ORTHO05D008818 3.6e-216 755.7 789 55.0
TPR.G36974 Trifolium pratense HOM05D006947 ORTHO05D008818 2.0e-214 750.0 783 54.4
Aa31LG7G7190 Aethionema arabicum HOM05D006947 ORTHO05D008818 2.6e-214 749.6 798 54.3
Carub.0001s2275 Capsella rubella HOM05D006947 ORTHO05D008818 3.7e-213 745.7 814 54.3
Gohir.A01G150136 Gossypium hirsutum HOM05D006947 ORTHO05D008818 6.4e-213 745.0 827 54.1
ATR0317G087 Amborella trichopoda HOM05D006947 ORTHO05D008818 8.3e-213 744.6 778 54.5
Actinidia36648 Actinidia chinensis HOM05D006947 ORTHO05D008818 7.0e-212 741.5 847 53.2
Medtr1g031750 Medicago truncatula HOM05D006947 ORTHO05D008818 1.2e-211 740.7 758 55.5
Aqoxy3G04093 Aquilegia oxysepala HOM05D006947 ORTHO05D008818 5.6e-209 731.9 754 56.0
Rhsim09G0093800 Rhododendron simsii HOM05D006947 ORTHO05D008818 1.3e-205 720.7 816 53.6
Thecc.02G287500 Theobroma cacao HOM05D006947 ORTHO05D008818 6.8e-199 698.4 684 58.0
MBI15_g36991_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 6.4e-197 691.8 677 55.7
HPP92_024592 Vanilla planifolia HOM05D006947 ORTHO05D008818 1.2e-190 671.0 778 50.1
Os01g0524700 Oryza sativa ssp. japonica HOM05D006947 ORTHO05D008818 5.8e-190 668.7 790 48.6
CDE11G0632 Ceratophyllum demersum HOM05D006947 ORTHO05D008818 3.8e-189 666.0 817 47.5
unitig_52.g17412 Utricularia gibba HOM05D006947 ORTHO05D008818 1.8e-183 647.1 713 51.9
Prupe.1G330100 Prunus persica HOM05D006947 ORTHO05D008818 3.5e-179 632.9 557 61.0
Hma1.2p1_0330F.1_g127410 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 8.7e-178 628.2 478 68.0
HPP92_024520 Vanilla planifolia HOM05D006947 ORTHO05D008818 9.0e-167 591.7 778 45.9
Nitab4.5_0000018g0180 Nicotiana tabacum HOM05D006947 ORTHO05D008818 1.9e-164 583.9 496 63.3
Psat6g044440 Pisum sativum HOM05D006947 ORTHO05D008818 3.0e-162 576.6 614 53.4
SalBow8G5231 Salvia bowleyana HOM05D006947 ORTHO05D008818 4.5e-158 562.8 586 54.6
Lj2g0020590 Lotus japonicus HOM05D006947 ORTHO05D008818 5.0e-157 559.3 592 54.1
MBI15_g41220_MAGBIO Magnolia biondii HOM05D006947 ORTHO05D008818 9.3e-156 555.1 707 47.4
Glyma.07G166300 Glycine max HOM05D006947 ORTHO05D008818 4.6e-155 552.7 486 59.5
vmacro10663 Vaccinium macrocarpon HOM05D006947 ORTHO05D008818 1.0e-149 535.0 772 45.7
PSO782G4825 Papaver somniferum HOM05D006947 ORTHO05D008818 7.9e-147 525.4 492 58.1
Migut.O00818 Erythranthe guttata HOM05D006947 ORTHO05D008818 2.6e-145 520.4 570 53.9
PSO063G5930 Papaver somniferum HOM05D006947 ORTHO05D008818 1.1e-143 515.0 492 57.5
Cpa.g.sc2.239 Carica papaya HOM05D006947 ORTHO05D008818 6.3e-128 462.6 634 45.0
Oeu023430.2 Olea europaea HOM05D006947 ORTHO05D008818 2.0e-118 431.0 873 38.0
Pp3c18_19500 Physcomitrium patens HOM05D006947 ORTHO05D008818 1.4e-111 408.3 793 36.1
Nn4g24252 Nelumbo nucifera HOM05D006947 ORTHO05D008818 2.7e-86 324.3 783 33.0
AagrBONN_evm.TU.Sc2ySwM_117.3643 Anthoceros agrestis HOM05D006947 ORTHO05D008818 5.2e-82 310.1 365 46.6
Hma1.2p1_0330F.1_g127420 Hydrangea macrophylla HOM05D006947 ORTHO05D008818 7.3e-76 289.7 275 61.5
Nitab4.5_0000532g0040 Nicotiana tabacum HOM05D006947 ORTHO05D008818 5.8e-73 280.0 231 64.9
Mapoly0112s0009 Marchantia polymorpha HOM05D006947 ORTHO05D008818 3.3e-68 264.2 617 30.6
Cpa.g.sc1084.1 Carica papaya HOM05D006947 ORTHO05D008818 8.1e-67 259.6 207 67.1
SalBow8G4359 Salvia bowleyana HOM05D006947 ORTHO05D008818 1.4e-66 258.8 254 55.9
Nitab4.5_0000532g0050 Nicotiana tabacum HOM05D006947 ORTHO05D008818 4.0e-66 257.3 260 54.6
PGSC0003DMG400015903 Solanum tuberosum HOM05D006947 ORTHO05D008818 2.4e-58 231.5 206 65.5
MD13G1021800 Malus domestica HOM05D006947 ORTHO05D008818 7.6e-57 226.5 215 59.1
CBR_g50426 Chara braunii HOM05D006947 ORTHO05D008818 3.8e-40 171.0 869 25.8
GSVIVG01031683001 Vitis vinifera HOM05D006947 ORTHO05D005406 1.2e-22 112.8 147 45.6
Psat1g011800 Pisum sativum HOM05D006947 ORTHO05D008818 9.7e-20 103.2 143 44.1
Psat6g175840 Pisum sativum HOM05D006947 ORTHO05D005363 5.5e-15 87.4 165 37.6
Psat4g128000 Pisum sativum HOM05D002621 ORTHO05D004807 1.0e-13 83.2 154 36.4
Psat6g091080 Pisum sativum HOM05D004333 ORTHO05D005363 4.8e-11 74.3 129 37.2
Oeu059516.1 Olea europaea HOM05D001630 ORTHO05D002505 2.5e-07 62.0 69 47.8
HPP92_012788 Vanilla planifolia HOM05D000577 ORTHO05D003389 9.4e-07 60.1 218 24.8


User provided reference genes

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