Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc14g0006440 Simmondsia chinensis HOM05D007601 ORTHO05D009605 5.5e-68 260.8 126 100.0
GSVIVG01028182001 Vitis vinifera HOM05D007601 ORTHO05D009605 2.4e-47 192.2 124 74.2
Gohir.A11G107400 Gossypium hirsutum HOM05D007601 ORTHO05D009605 5.4e-47 191.0 126 73.8
arahy.Tifrunner.gnm1.ann1.UJ54IQ Arachis hypogaea HOM05D007601 ORTHO05D009605 9.2e-47 190.3 121 76.9
Hma1.2p1_0965F.1_g242190 Hydrangea macrophylla HOM05D007601 ORTHO05D009605 9.2e-47 190.3 123 75.6
AUR62011748 Chenopodium quinoa HOM05D007601 ORTHO05D009605 1.6e-46 189.5 122 71.3
Ciclev10022849m.g Citrus clementina HOM05D007601 ORTHO05D009605 1.6e-46 189.5 125 72.8
Phvul.001G215600 Phaseolus vulgaris HOM05D007601 ORTHO05D009605 1.6e-46 189.5 118 78.8
Cpa.g.c29544.1 Carica papaya HOM05D007601 ORTHO05D009605 2.0e-46 189.1 124 71.8
EL10As5g23595 Beta vulgaris HOM05D007601 ORTHO05D009605 3.5e-46 188.3 121 71.1
Duzib138G1106 Durio zibethinus HOM05D007601 ORTHO05D009605 3.5e-46 188.3 126 73.0
arahy.Tifrunner.gnm1.ann1.FU6CGW Arachis hypogaea HOM05D007601 ORTHO05D009605 4.6e-46 188.0 121 76.0
Potri.002G191200 Populus trichocarpa HOM05D007601 ORTHO05D009605 4.6e-46 188.0 124 75.0
COL.COLO4_23178 Corchorus olitorius HOM05D007601 ORTHO05D009605 6.0e-46 187.6 126 73.0
Thecc.01G320300 Theobroma cacao HOM05D007601 ORTHO05D009605 7.8e-46 187.2 126 73.0
Hund09590 Selenicereus undatus HOM05D007601 ORTHO05D009605 1.0e-45 186.8 119 73.1
Dinv33148 Davidia involucrata HOM05D007601 ORTHO05D009605 1.7e-45 186.0 120 75.0
Gohir.D11G112200 Gossypium hirsutum HOM05D007601 ORTHO05D009605 1.7e-45 186.0 126 73.0
QL12p018497 Quercus lobata HOM05D007601 ORTHO05D009605 1.7e-45 186.0 122 70.5
THA.LOC104815915 Tarenaya hassleriana HOM05D007601 ORTHO05D009605 1.7e-45 186.0 118 72.9
Glyma.03G222200 Glycine max HOM05D007601 ORTHO05D009605 3.0e-45 185.3 119 76.5
CiPaw.07G121600 Carya illinoinensis HOM05D007601 ORTHO05D009605 5.0e-45 184.5 120 73.3
DCAR_002918 Daucus carota HOM05D007601 ORTHO05D009605 5.0e-45 184.5 120 75.0
Manes.01G231900 Manihot esculenta HOM05D007601 ORTHO05D009605 5.0e-45 184.5 120 74.2
Eucgr.H00897 Eucalyptus grandis HOM05D007601 ORTHO05D009605 6.6e-45 184.1 120 73.3
Medtr7g109980 Medicago truncatula HOM05D007601 ORTHO05D009605 6.6e-45 184.1 119 74.8
Atru.chr5.923 Acer truncatum HOM05D007601 ORTHO05D009605 1.1e-44 183.3 120 73.3
CANSAT25G0069 Cannabis sativa HOM05D007601 ORTHO05D009605 2.5e-44 182.2 122 73.0
Psat3g018760 Pisum sativum HOM05D007601 ORTHO05D009605 2.5e-44 182.2 119 74.8
Ca_09231_v3 Cicer arietinum L. HOM05D007601 ORTHO05D009605 3.3e-44 181.8 119 73.9
Sabra02G0164400 Salix brachista HOM05D007601 ORTHO05D009605 3.3e-44 181.8 121 73.6
CSS0043622 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 4.3e-44 181.4 120 73.3
VMungo1383G2396 Vigna mungo HOM05D007601 ORTHO05D009605 4.3e-44 181.4 118 76.3
MSTRG.18076 Avicennia marina HOM05D007601 ORTHO05D009605 7.3e-44 180.6 119 73.1
Glyma.19G219400 Glycine max HOM05D007601 ORTHO05D009605 7.3e-44 180.6 118 74.6
Lalb_Chr04g0260071 Lupinus albus HOM05D007601 ORTHO05D009605 7.3e-44 180.6 120 72.5
PSO210G6513 Papaver somniferum HOM05D007601 ORTHO05D009605 7.3e-44 180.6 117 70.9
Prupe.3G005400 Prunus persica HOM05D007601 ORTHO05D009605 9.5e-44 180.3 120 72.5
TAR633G2747 Trochodendron aralioides HOM05D007601 ORTHO05D009605 1.6e-43 179.5 125 72.0
CSS0036648 Camellia sinensis var. sinensis HOM05D007601 ORTHO05D009605 2.1e-43 179.1 120 71.7
Lj1g0003568 Lotus japonicus HOM05D007601 ORTHO05D009605 2.1e-43 179.1 117 72.6
TPR.G4122 Trifolium pratense HOM05D007601 ORTHO05D009605 2.8e-43 178.7 119 73.1
Thhalv10029076m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 4.7e-43 177.9 118 67.8
Aa31LG5G1450 Aethionema arabicum HOM05D007601 ORTHO05D009605 8.1e-43 177.2 119 67.2
Carub.0006s3532 Capsella rubella HOM05D007601 ORTHO05D009605 8.1e-43 177.2 124 67.7
TWI59G0276 Tripterygium wilfordii HOM05D007601 ORTHO05D009605 8.1e-43 177.2 110 79.1
Migut.D00044 Erythranthe guttata HOM05D007601 ORTHO05D009605 1.4e-42 176.4 123 70.7
MD17G1280000 Malus domestica HOM05D007601 ORTHO05D009605 1.4e-42 176.4 119 71.4
Sp6g01760 Schrenkiella parvula HOM05D007601 ORTHO05D009605 1.4e-42 176.4 117 65.8
MD09G1287800 Malus domestica HOM05D007601 ORTHO05D009605 1.8e-42 176.0 120 70.8
PSO761G0263 Papaver somniferum HOM05D007601 ORTHO05D009605 1.8e-42 176.0 122 67.2
BraA03t12322Z Brassica rapa HOM05D007601 ORTHO05D009605 4.0e-42 174.9 117 66.7
A03p31410 Brassica napus HOM05D007601 ORTHO05D009605 8.9e-42 173.7 117 65.8
BcaC01g06793 Brassica carinata HOM05D007601 ORTHO05D009605 1.5e-41 172.9 119 64.7
BcaC01g06795 Brassica carinata HOM05D007601 ORTHO05D009605 1.5e-41 172.9 119 64.7
C03p38320 Brassica napus HOM05D007601 ORTHO05D009605 1.5e-41 172.9 119 64.7
BolC3t16113H Brassica oleracea HOM05D007601 ORTHO05D009605 1.5e-41 172.9 119 64.7
BcaB01g02392 Brassica carinata HOM05D007601 ORTHO05D009605 2.0e-41 172.6 117 65.0
Oeu044742.1 Olea europaea HOM05D007601 ORTHO05D009605 4.4e-41 171.4 120 68.3
Sed0008912 Sechium edule HOM05D007601 ORTHO05D009605 5.8e-41 171.0 118 68.6
CARHR249870 Cardamine hirsuta HOM05D007601 ORTHO05D009605 7.5e-41 170.6 117 63.2
AL6G51380 Arabidopsis lyrata HOM05D007601 ORTHO05D009605 1.3e-40 169.9 119 64.7
Sopen06g036000 Solanum pennellii HOM05D007601 ORTHO05D009605 1.3e-40 169.9 120 67.5
CsaV3_3G031680 Cucumis sativus L. HOM05D007601 ORTHO05D009605 2.2e-40 169.1 120 67.5
Rhsim01G0292900 Rhododendron simsii HOM05D007601 ORTHO05D009605 2.2e-40 169.1 109 73.4
FvH4_1g26600 Fragaria vesca HOM05D007601 ORTHO05D009605 3.7e-40 168.3 124 66.9
FAN26G1400 Fragaria x ananassa HOM05D007601 ORTHO05D009605 3.7e-40 168.3 122 67.2
ClCG10G011680 Citrullus lanatus HOM05D007601 ORTHO05D009605 1.4e-39 166.4 141 60.3
ECA248G1243 Erigeron canadensis HOM05D007601 ORTHO05D009605 7.1e-39 164.1 119 64.7
HanXRQChr01g0010181 Helianthus annuus HOM05D007601 ORTHO05D009605 7.1e-39 164.1 126 62.7
RcHm_v2.0_Chr3g0486741 Rosa chinensis HOM05D007601 ORTHO05D009605 7.1e-39 164.1 115 70.4
AT4G01897 Arabidopsis thaliana HOM05D007601 ORTHO05D009605 9.2e-39 163.7 119 63.0
Aqoxy2G02617 Aquilegia oxysepala HOM05D007601 ORTHO05D009605 7.8e-38 160.6 126 65.1
Gorai.007G120500 Gossypium raimondii HOM05D007601 ORTHO05D009605 1.3e-37 159.8 106 73.6
Cc01_g21960 Coffea canephora HOM05D007601 ORTHO05D009605 1.5e-36 156.4 122 64.8
FAN19G1881 Fragaria x ananassa HOM05D007601 ORTHO05D009605 9.5e-36 153.7 151 55.0
Os03g0564200 Oryza sativa ssp. japonica HOM05D007601 ORTHO05D009605 1.6e-35 152.9 114 64.0
Zm00001eb043090 Zea mays HOM05D007601 ORTHO05D009605 4.7e-35 151.4 125 57.6
Nn4g25447 Nelumbo nucifera HOM05D007601 ORTHO05D009605 1.8e-34 149.4 120 62.5
MELO3C012921.2 Cucumis melo HOM05D007601 ORTHO05D009605 6.8e-34 147.5 99 70.7
CAN.G1209.15 Capsicum annuum HOM05D007601 ORTHO05D009605 5.8e-33 144.4 120 60.0
FAN28G1650 Fragaria x ananassa HOM05D007601 ORTHO05D009605 7.6e-33 144.1 97 70.1
AUR62024591 Chenopodium quinoa HOM05D007601 ORTHO05D009605 2.2e-32 142.5 121 57.9
SalBow6G1877 Salvia bowleyana HOM05D007601 ORTHO05D009605 6.2e-27 124.4 77 76.6
Solyc06g084625.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 1.3e-24 116.7 80 68.8
AagrBONN_evm.TU.Sc2ySwM_228.1634 Anthoceros agrestis HOM05D007601 ORTHO05D009605 3.8e-24 115.2 113 48.7
Pp3c1_30400 Physcomitrium patens HOM05D007601 ORTHO05D009605 1.9e-23 112.8 111 50.5
FAN23G1483 Fragaria x ananassa HOM05D007601 ORTHO05D009605 7.8e-22 107.5 80 66.2
MBI19_g32697_MAGBIO Magnolia biondii HOM05D007601 ORTHO05D009605 1.7e-21 106.3 93 61.3
CDE05G3673 Ceratophyllum demersum HOM05D007601 ORTHO05D009605 1.9e-20 102.8 80 62.5
Mapoly0105s0007 Marchantia polymorpha HOM05D007601 ORTHO05D009605 1.3e-16 90.1 106 47.2
vmacro15096 Vaccinium macrocarpon HOM05D007601 ORTHO05D009605 1.3e-16 90.1 62 69.4
SMO196G0166 Selaginella moellendorffii HOM05D007601 ORTHO05D009605 2.1e-14 82.8 104 41.3
Thhalv10009552m.g Eutrema salsugineum HOM05D007601 ORTHO05D009605 2.1e-11 72.8 90 43.3
CBR_g40435 Chara braunii HOM05D007601 ORTHO05D009605 2.2e-08 62.8 93 41.9
Solyc04g150173.1 Solanum lycopersicum HOM05D007601 ORTHO05D009605 1.9e-07 59.7 41 65.9


User provided reference genes

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