Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc14g0006350 Simmondsia chinensis HOM05D005465 ORTHO05D006612 1.5e-65 252.7 123 100.0
DCAR_011037 Daucus carota HOM05D005465 ORTHO05D006612 4.8e-48 194.5 119 76.5
CSS0002198 Camellia sinensis var. sinensis HOM05D005465 ORTHO05D006612 8.1e-48 193.7 120 74.2
Ah.10g032300 Amaranthus hybridus HOM05D005465 ORTHO05D006612 1.3e-45 186.4 120 73.3
ClCG04G011730 Citrullus lanatus HOM05D005465 ORTHO05D006612 1.7e-45 186.0 121 72.7
Manes.06G083500 Manihot esculenta HOM05D005465 ORTHO05D006612 1.7e-45 186.0 121 73.6
Nn3g17466 Nelumbo nucifera HOM05D005465 ORTHO05D006612 1.7e-45 186.0 120 75.0
Nn4g23446 Nelumbo nucifera HOM05D005465 ORTHO05D006612 1.7e-45 186.0 122 73.0
TAR622G0582 Trochodendron aralioides HOM05D005465 ORTHO05D006612 2.9e-45 185.3 121 72.7
AUR62038681 Chenopodium quinoa HOM05D005465 ORTHO05D006612 4.9e-45 184.5 120 70.0
AUR62018194 Chenopodium quinoa HOM05D005465 ORTHO05D006612 6.4e-45 184.1 120 71.7
Hma1.2p1_0481F.1_g162260 Hydrangea macrophylla HOM05D005465 ORTHO05D006612 6.4e-45 184.1 119 73.9
Hma1.2p1_0481F.1_g162270 Hydrangea macrophylla HOM05D005465 ORTHO05D006612 6.4e-45 184.1 119 73.9
MELO3C002037.2 Cucumis melo HOM05D005465 ORTHO05D006612 8.4e-45 183.7 121 71.1
Nitab4.5_0000212g0270 Nicotiana tabacum HOM05D005465 ORTHO05D006612 8.4e-45 183.7 120 74.2
PSO782G3842 Papaver somniferum HOM05D005465 ORTHO05D006612 8.4e-45 183.7 121 72.7
Duzib205G0879 Durio zibethinus HOM05D005465 ORTHO05D006612 1.1e-44 183.3 121 72.7
Solyc10g082064.1 Solanum lycopersicum HOM05D005465 ORTHO05D006612 1.1e-44 183.3 120 75.0
Duzib084G0509 Durio zibethinus HOM05D005465 ORTHO05D006612 1.4e-44 183.0 120 73.3
PSO063G4354 Papaver somniferum HOM05D005465 ORTHO05D006612 2.4e-44 182.2 121 73.6
Thecc.03G103400 Theobroma cacao HOM05D005465 ORTHO05D006612 2.4e-44 182.2 122 73.8
RcHm_v2.0_Chr7g0183221 Rosa chinensis HOM05D005465 ORTHO05D006612 3.2e-44 181.8 120 75.0
Actinidia26253 Actinidia chinensis HOM05D005465 ORTHO05D006612 4.2e-44 181.4 120 70.0
PGSC0003DMG400026569 Solanum tuberosum HOM05D005465 ORTHO05D006612 4.2e-44 181.4 120 73.3
Nitab4.5_0008370g0030 Nicotiana tabacum HOM05D005465 ORTHO05D006612 5.4e-44 181.0 117 76.1
SGA_v2.0_scaffold4G02379 Striga asiatica HOM05D005465 ORTHO05D006612 5.4e-44 181.0 120 75.0
Prupe.5G206300 Prunus persica HOM05D005465 ORTHO05D006612 9.3e-44 180.3 121 71.1
Aqoxy3G03677 Aquilegia oxysepala HOM05D005465 ORTHO05D006612 1.2e-43 179.9 121 66.9
ECA232G0503 Erigeron canadensis HOM05D005465 ORTHO05D006612 1.2e-43 179.9 119 72.3
Gohir.D03G097000 Gossypium hirsutum HOM05D005465 ORTHO05D006612 1.2e-43 179.9 121 72.7
Gorai.003G101800 Gossypium raimondii HOM05D005465 ORTHO05D006612 1.2e-43 179.9 121 72.7
Gohir.A03G070600 Gossypium hirsutum HOM05D005465 ORTHO05D006612 2.7e-43 178.7 121 71.9
COL.COLO4_24335 Corchorus olitorius HOM05D005465 ORTHO05D006612 4.6e-43 177.9 121 71.1
CsaV3_1G006060 Cucumis sativus L. HOM05D005465 ORTHO05D006612 4.6e-43 177.9 121 68.6
SGA_v2.0_scaffold52G19131 Striga asiatica HOM05D005465 ORTHO05D006612 4.6e-43 177.9 120 73.3
EL10Ac2g03144 Beta vulgaris HOM05D005465 ORTHO05D006612 7.9e-43 177.2 120 70.0
CiPaw.11G054700 Carya illinoinensis HOM05D005465 ORTHO05D006612 7.9e-43 177.2 122 72.1
Glyma.17G079700 Glycine max HOM05D005465 ORTHO05D006612 1.0e-42 176.8 122 70.5
Lsat_1_v5_gn_4_171900 Lactuca sativa HOM05D005465 ORTHO05D006612 1.3e-42 176.4 119 69.7
FvH4_5g13720 Fragaria vesca HOM05D005465 ORTHO05D006612 2.3e-42 175.6 120 71.7
FAN18G4042 Fragaria x ananassa HOM05D005465 ORTHO05D006612 2.3e-42 175.6 120 71.7
MD14G1213000 Malus domestica HOM05D005465 ORTHO05D006612 3.0e-42 175.3 118 72.0
Peaxi162Scf00991g00013 Petunia axillaris HOM05D005465 ORTHO05D006612 3.0e-42 175.3 120 69.2
Sed0023287 Sechium edule HOM05D005465 ORTHO05D006612 3.9e-42 174.9 121 66.9
Cc07_g04290 Coffea canephora HOM05D005465 ORTHO05D006612 5.1e-42 174.5 120 70.0
MD06G1226100 Malus domestica HOM05D005465 ORTHO05D006612 5.1e-42 174.5 117 71.8
Rhsim08G0075200 Rhododendron simsii HOM05D005465 ORTHO05D006612 1.1e-41 173.3 118 72.0
Glyma.05G020100 Glycine max HOM05D005465 ORTHO05D006612 1.9e-41 172.6 122 68.0
FAN13G0353 Fragaria x ananassa HOM05D005465 ORTHO05D006612 2.5e-41 172.2 119 70.6
Nitab4.5_0010535g0020 Nicotiana tabacum HOM05D005465 ORTHO05D006612 3.3e-41 171.8 120 66.7
Eucgr.K02534 Eucalyptus grandis HOM05D005465 ORTHO05D006612 4.3e-41 171.4 122 67.2
PGR044G0931 Punica granatum HOM05D005465 ORTHO05D006612 4.3e-41 171.4 121 71.9
VMungo1215G2862 Vigna mungo HOM05D005465 ORTHO05D006612 5.6e-41 171.0 121 68.6
BcaB01g05639 Brassica carinata HOM05D005465 ORTHO05D006612 7.4e-41 170.6 122 68.0
TWI81G0357 Tripterygium wilfordii HOM05D005465 ORTHO05D006612 7.4e-41 170.6 121 67.8
AL6G18430 Arabidopsis lyrata HOM05D005465 ORTHO05D006612 9.6e-41 170.2 121 66.1
BcaB08g37294 Brassica carinata HOM05D005465 ORTHO05D006612 1.3e-40 169.9 122 67.2
C09p68870 Brassica napus HOM05D005465 ORTHO05D006612 1.3e-40 169.9 122 67.2
CARHR205120 Cardamine hirsuta HOM05D005465 ORTHO05D006612 1.3e-40 169.9 122 67.2
Cfa019348 Carpinus fangiana HOM05D005465 ORTHO05D006612 1.3e-40 169.9 122 68.9
Haze_07739 Corylus avellana HOM05D005465 ORTHO05D006612 1.3e-40 169.9 122 68.9
Thhalv10015010m.g Eutrema salsugineum HOM05D005465 ORTHO05D006612 1.3e-40 169.9 122 68.9
Gorai.006G268200 Gossypium raimondii HOM05D005465 ORTHO05D006612 1.3e-40 169.9 121 67.8
Lj4g0014841 Lotus japonicus HOM05D005465 ORTHO05D006612 1.3e-40 169.9 121 66.9
Nitab4.5_0005910g0030 Nicotiana tabacum HOM05D005465 ORTHO05D006612 1.3e-40 169.9 120 65.8
Sp6g34890 Schrenkiella parvula HOM05D005465 ORTHO05D006612 1.3e-40 169.9 122 67.2
THA.LOC104801135 Tarenaya hassleriana HOM05D005465 ORTHO05D006612 1.3e-40 169.9 122 68.9
A10p28580 Brassica napus HOM05D005465 ORTHO05D006612 1.6e-40 169.5 122 66.4
BolC9t59633H Brassica oleracea HOM05D005465 ORTHO05D006612 1.6e-40 169.5 122 66.4
unitig_899.g15102 Utricularia gibba HOM05D005465 ORTHO05D006612 1.6e-40 169.5 121 70.2
AT5G08060 Arabidopsis thaliana HOM05D005465 ORTHO05D006612 2.1e-40 169.1 121 66.1
BraA10t44907Z Brassica rapa HOM05D005465 ORTHO05D006612 4.8e-40 167.9 122 65.6
Cpa.g.sc746.2 Carica papaya HOM05D005465 ORTHO05D006612 6.2e-40 167.5 121 66.1
Phvul.003G183800 Phaseolus vulgaris HOM05D005465 ORTHO05D006612 8.1e-40 167.2 121 66.9
TAR371G0638 Trochodendron aralioides HOM05D005465 ORTHO05D006612 8.1e-40 167.2 121 68.6
Aa31LG3G18480 Aethionema arabicum HOM05D005465 ORTHO05D006612 1.1e-39 166.8 120 65.0
Carub.0006s0695 Capsella rubella HOM05D005465 ORTHO05D006612 1.4e-39 166.4 120 65.8
DCAR_025436 Daucus carota HOM05D005465 ORTHO05D006612 1.4e-39 166.4 122 63.1
Peaxi162Scf00166g00046 Petunia axillaris HOM05D005465 ORTHO05D006612 1.8e-39 166.0 121 62.8
arahy.Tifrunner.gnm1.ann1.13IMLW Arachis hypogaea HOM05D005465 ORTHO05D006612 2.4e-39 165.6 121 66.9
Potri.004G123700 Populus trichocarpa HOM05D005465 ORTHO05D006612 2.4e-39 165.6 121 65.3
Lalb_Chr13g0302801 Lupinus albus HOM05D005465 ORTHO05D006612 4.0e-39 164.9 121 66.9
PGSC0003DMG400001360 Solanum tuberosum HOM05D005465 ORTHO05D006612 5.3e-39 164.5 120 64.2
Sopen02g033620 Solanum pennellii HOM05D005465 ORTHO05D006612 6.9e-39 164.1 120 63.3
TPR.G2036 Trifolium pratense HOM05D005465 ORTHO05D006612 1.2e-38 163.3 121 62.0
Ciclev10022497m.g Citrus clementina HOM05D005465 ORTHO05D006612 1.5e-38 162.9 121 63.6
Migut.H00618 Erythranthe guttata HOM05D005465 ORTHO05D006612 2.0e-38 162.5 122 63.1
Atru.chr9.555 Acer truncatum HOM05D005465 ORTHO05D006612 3.4e-38 161.8 122 66.4
PGSC0003DMG400035500 Solanum tuberosum HOM05D005465 ORTHO05D006612 5.8e-38 161.0 120 63.3
Solyc02g088930.4 Solanum lycopersicum HOM05D005465 ORTHO05D006612 9.9e-38 160.2 119 62.2
A03p03570 Brassica napus HOM05D005465 ORTHO05D006612 1.3e-37 159.8 122 65.6
BraA03t09707Z Brassica rapa HOM05D005465 ORTHO05D006612 1.3e-37 159.8 122 65.6
Dinv34936 Davidia involucrata HOM05D005465 ORTHO05D006612 4.9e-37 157.9 92 80.4
Medtr4g109650 Medicago truncatula HOM05D005465 ORTHO05D006612 4.9e-37 157.9 121 61.2
BraA02t04941Z Brassica rapa HOM05D005465 ORTHO05D006612 6.4e-37 157.5 122 62.3
Sabra04G0090300 Salix brachista HOM05D005465 ORTHO05D006612 8.4e-37 157.1 121 62.0
Ca_21764_v3 Cicer arietinum L. HOM05D005465 ORTHO05D006612 1.1e-36 156.8 121 62.0
Rhsim10G0048500 Rhododendron simsii HOM05D005465 ORTHO05D006612 1.4e-36 156.4 120 60.8
BolC3t12939H Brassica oleracea HOM05D005465 ORTHO05D006612 1.9e-36 156.0 123 65.0
Zm00001eb370380 Zea mays HOM05D005465 ORTHO05D006612 1.9e-36 156.0 123 62.6
Rhsim10G0047800 Rhododendron simsii HOM05D005465 ORTHO05D006612 2.4e-36 155.6 120 60.8
MBI16_g10835_MAGBIO Magnolia biondii HOM05D005465 ORTHO05D006612 4.2e-36 154.8 118 63.6
Zm00001eb152340 Zea mays HOM05D005465 ORTHO05D006612 7.1e-36 154.1 123 61.8
Psat4g047600 Pisum sativum HOM05D005465 ORTHO05D006612 9.3e-36 153.7 121 61.2
SHI17457 Sapria himalayana HOM05D005465 ORTHO05D006612 1.3e-34 149.8 119 59.7
Os01g0763300 Oryza sativa ssp. japonica HOM05D005465 ORTHO05D006612 3.0e-34 148.7 122 57.4
QL10p019840 Quercus lobata HOM05D005465 ORTHO05D006612 1.1e-33 146.7 121 57.0
Oeu062167.1 Olea europaea HOM05D005465 ORTHO05D006612 2.5e-33 145.6 120 62.5
Rhsim10G0050100 Rhododendron simsii HOM05D005465 ORTHO05D006612 1.3e-32 143.3 120 59.2
BcaB05g21584 Brassica carinata HOM05D005465 ORTHO05D006612 8.2e-32 140.6 124 57.3
Gohir.D09G244200 Gossypium hirsutum HOM05D005465 ORTHO05D006612 4.0e-31 138.3 121 60.3
Hma1.2p1_0029F.1_g018040 Hydrangea macrophylla HOM05D005465 ORTHO05D006612 3.2e-28 128.6 74 77.0
Rhsim10G0048300 Rhododendron simsii HOM05D005465 ORTHO05D006612 3.2e-28 128.6 120 55.0
EL10Ac5g11896 Beta vulgaris HOM05D005465 ORTHO05D006612 4.2e-28 128.3 94 63.8
Sopen02g016050 Solanum pennellii HOM05D005465 ORTHO05D006612 1.1e-25 120.2 120 54.2
BcaB08g37291 Brassica carinata HOM05D005465 ORTHO05D006612 3.3e-25 118.6 122 49.2
Gohir.A09G243500 Gossypium hirsutum HOM05D005465 ORTHO05D006612 1.6e-24 116.3 73 71.2
CDE02G4042 Ceratophyllum demersum HOM05D005465 ORTHO05D006612 2.4e-23 112.5 91 57.1
Sopen10g012570 Solanum pennellii HOM05D005465 ORTHO05D006612 5.3e-23 111.3 114 53.5
Sopen10g022010 Solanum pennellii HOM05D005465 ORTHO05D006612 2.6e-22 109.0 120 51.7
Sopen10g006060 Solanum pennellii HOM05D005465 ORTHO05D006612 8.5e-21 104.0 114 51.8
EL10Ac5g12104 Beta vulgaris HOM05D005465 ORTHO05D006612 2.7e-19 99.0 66 71.2
Actinidia17587 Actinidia chinensis HOM05D005465 ORTHO05D006612 3.6e-19 98.6 61 70.5
SEGI_31914 Sequoiadendron giganteum HOM05D005465 ORTHO05D006612 1.1e-17 93.6 121 42.1
SEGI_27681 Sequoiadendron giganteum HOM05D005465 ORTHO05D006612 2.2e-16 89.4 128 42.2
BcaB01g05638 Brassica carinata HOM05D005465 ORTHO05D006612 6.3e-16 87.8 74 60.8
TAR622G1303 Trochodendron aralioides HOM05D005465 ORTHO05D006612 1.4e-15 86.7 71 60.6
FAN08G0639 Fragaria x ananassa HOM05D005465 ORTHO05D006612 5.3e-15 84.7 61 62.3
AagrBONN_evm.TU.Sc2ySwM_362.2833 Anthoceros agrestis HOM05D005465 ORTHO05D006612 1.9e-12 76.3 71 49.3
Mapoly0019s0055 Marchantia polymorpha HOM05D005465 ORTHO05D006612 1.9e-12 76.3 77 41.6
CBR_g37656 Chara braunii HOM05D005465 ORTHO05D006612 3.6e-11 72.0 64 48.4
SMO263G0026 Selaginella moellendorffii HOM05D005465 ORTHO05D006612 3.6e-11 72.0 121 33.9
Cre12.g484700 Chlamydomonas reinhardtii HOM05D005465 ORTHO05D006612 2.3e-10 69.3 74 45.9
MCO16G501 Micromonas commoda HOM05D005465 ORTHO05D006612 1.5e-09 66.6 77 41.6
Pp3c16_5680 Physcomitrium patens HOM05D005465 ORTHO05D006612 2.0e-09 66.2 67 44.8
Lsat_1_v5_gn_4_50580 Lactuca sativa HOM05D005465 ORTHO05D006612 1.7e-08 63.2 57 52.6
Peaxi162Scf00991g00114 Petunia axillaris HOM05D005465 ORTHO05D006612 2.4e-07 59.3 119 36.1
SGA_v2.0_scaffold187G40263 Striga asiatica HOM05D005465 ORTHO05D006612 2.4e-07 59.3 100 41.0


User provided reference genes

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