Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc14g0006230 Simmondsia chinensis HOM05D007413 ORTHO05D009357 2.9e-48 194.9 98 100.0
Sopen02g033450 Solanum pennellii HOM05D007413 ORTHO05D009357 1.1e-10 70.1 59 61.0
Solyc02g088740.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 2.4e-10 68.9 59 61.0
Hma1.2p1_0481F.1_g162070 Hydrangea macrophylla HOM05D007413 ORTHO05D009357 4.1e-10 68.2 106 45.3
TPR.G10008 Trifolium pratense HOM05D007413 ORTHO05D009357 7.0e-10 67.4 81 43.2
Ciclev10013609m.g Citrus clementina HOM05D007413 ORTHO05D009357 9.1e-10 67.0 74 47.3
Cpa.g.sc3362.1 Carica papaya HOM05D007413 ORTHO05D009357 2.0e-09 65.9 66 53.0
Nitab4.5_0010051g0020 Nicotiana tabacum HOM05D007413 ORTHO05D009357 2.0e-09 65.9 55 60.0
Psat1g067640 Pisum sativum HOM05D007413 ORTHO05D009357 2.7e-09 65.5 81 46.9
Potri.004G119600 Populus trichocarpa HOM05D007413 ORTHO05D009357 2.7e-09 65.5 92 41.3
Nitab4.5_0000565g0230 Nicotiana tabacum HOM05D007413 ORTHO05D009357 4.5e-09 64.7 55 60.0
Sabra04G0069100 Salix brachista HOM05D007413 ORTHO05D009357 4.5e-09 64.7 67 44.8
Lsat_1_v5_gn_2_87601 Lactuca sativa HOM05D007413 ORTHO05D009357 7.7e-09 63.9 96 44.8
VMungo0464G1276 Vigna mungo HOM05D007413 ORTHO05D009357 7.7e-09 63.9 93 38.7
CAN.G206.219 Capsicum annuum HOM05D007413 ORTHO05D009357 1.3e-08 63.2 53 60.4
MELO3C022028.2 Cucumis melo HOM05D007413 ORTHO05D009357 2.2e-08 62.4 94 40.4
Medtr6g015150 Medicago truncatula HOM05D007413 ORTHO05D009357 2.2e-08 62.4 55 56.4
Oeu010247.1 Olea europaea HOM05D007413 ORTHO05D009357 3.8e-08 61.6 88 43.2
THA.LOC104825781 Tarenaya hassleriana HOM05D007413 ORTHO05D009357 5.0e-08 61.2 69 47.8
Thecc.04G093400 Theobroma cacao HOM05D007413 ORTHO05D009357 5.0e-08 61.2 60 51.7
Aqoxy3G03598 Aquilegia oxysepala HOM05D007413 ORTHO05D009357 6.5e-08 60.8 60 51.7
QL02p067998 Quercus lobata HOM05D007413 ORTHO05D009357 6.5e-08 60.8 86 43.0
Sabra17G0082000 Salix brachista HOM05D007413 ORTHO05D009357 6.5e-08 60.8 110 35.5
Eucgr.I02025 Eucalyptus grandis HOM05D007413 ORTHO05D009357 8.5e-08 60.5 74 47.3
FAN02G2783 Fragaria x ananassa HOM05D007413 ORTHO05D009357 1.1e-07 60.1 58 46.6
Manes.01G097200 Manihot esculenta HOM05D007413 ORTHO05D009357 1.1e-07 60.1 58 53.4
Phvul.004G035200 Phaseolus vulgaris HOM05D007413 ORTHO05D009357 1.1e-07 60.1 101 38.6
Potri.017G093000 Populus trichocarpa HOM05D007413 ORTHO05D009357 1.1e-07 60.1 63 50.8
Duzib147G0133 Durio zibethinus HOM05D007413 ORTHO05D009357 1.5e-07 59.7 59 52.5
Manes.02G054200 Manihot esculenta HOM05D007413 ORTHO05D009357 1.5e-07 59.7 90 42.2
Migut.K01283 Erythranthe guttata HOM05D007413 ORTHO05D009357 1.9e-07 59.3 103 39.8
Glyma.13G057000 Glycine max HOM05D007413 ORTHO05D009357 2.5e-07 58.9 66 42.4
Oeu007062.1 Olea europaea HOM05D007413 ORTHO05D009357 2.5e-07 58.9 106 39.6
FvH4_6g47010 Fragaria vesca HOM05D007413 ORTHO05D009357 3.2e-07 58.5 54 48.1
FAN09G1793 Fragaria x ananassa HOM05D007413 ORTHO05D009357 3.2e-07 58.5 54 48.1
FAN14G4532 Fragaria x ananassa HOM05D007413 ORTHO05D009357 3.2e-07 58.5 54 48.1
SalBow1G0329 Salvia bowleyana HOM05D007413 ORTHO05D009357 3.2e-07 58.5 94 44.7
Carub.0007s3668 Capsella rubella HOM05D007413 ORTHO05D009357 4.2e-07 58.2 98 34.7
DCAR_011043 Daucus carota HOM05D007413 ORTHO05D009357 4.2e-07 58.2 85 41.2
Lj2g0007962 Lotus japonicus HOM05D007413 ORTHO05D009357 4.2e-07 58.2 55 54.5
Nn3g17420 Nelumbo nucifera HOM05D007413 ORTHO05D009357 4.2e-07 58.2 103 40.8
Oeu062157.1 Olea europaea HOM05D007413 ORTHO05D009357 4.2e-07 58.2 83 44.6
Prupe.3G256400 Prunus persica HOM05D007413 ORTHO05D009357 4.2e-07 58.2 63 50.8
THA.LOC109116393 Tarenaya hassleriana HOM05D007413 ORTHO05D009357 4.2e-07 58.2 105 41.9
Cfa007655 Carpinus fangiana HOM05D007413 ORTHO05D009357 5.5e-07 57.8 76 44.7
Lalb_Chr06g0174991 Lupinus albus HOM05D007413 ORTHO05D009357 5.5e-07 57.8 60 48.3
Nitab4.5_0005916g0020 Nicotiana tabacum HOM05D007413 ORTHO05D009357 5.5e-07 57.8 73 45.2
Solyc02g066970.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 7.2e-07 57.4 63 54.0
Sopen02g016170 Solanum pennellii HOM05D007413 ORTHO05D009357 7.2e-07 57.4 63 52.4
AT5G39240 Arabidopsis thaliana HOM05D007413 ORTHO05D009357 9.4e-07 57.0 97 34.0
CANSAT64G0406 Cannabis sativa HOM05D007413 ORTHO05D009357 9.4e-07 57.0 94 38.3
CAN.G398.10 Capsicum annuum HOM05D007413 ORTHO05D009357 9.4e-07 57.0 77 46.8
Cc07_g04120 Coffea canephora HOM05D007413 ORTHO05D009357 9.4e-07 57.0 82 45.1
SalBow1G6503 Salvia bowleyana HOM05D007413 ORTHO05D009357 9.4e-07 57.0 73 45.2
PGR004G0469 Punica granatum HOM05D007413 ORTHO05D009357 1.2e-06 56.6 85 49.4
Actinidia26249 Actinidia chinensis HOM05D007413 ORTHO05D009357 1.6e-06 56.2 96 39.6
FAN05G2048 Fragaria x ananassa HOM05D007413 ORTHO05D009357 1.6e-06 56.2 54 46.3
MD17G1057900 Malus domestica HOM05D007413 ORTHO05D009357 1.6e-06 56.2 92 41.3
RcHm_v2.0_Chr2g0166071 Rosa chinensis HOM05D007413 ORTHO05D009357 1.6e-06 56.2 59 42.4
ATR0064G025 Amborella trichopoda HOM05D007413 ORTHO05D009357 2.1e-06 55.8 80 42.5
MD09G1064600 Malus domestica HOM05D007413 ORTHO05D009357 2.1e-06 55.8 99 41.4
Sed0019528 Sechium edule HOM05D007413 ORTHO05D009357 2.1e-06 55.8 98 39.8
PGSC0003DMG400025144 Solanum tuberosum HOM05D007413 ORTHO05D009357 2.1e-06 55.8 63 52.4
SGA_v2.0_scaffold148G36473 Striga asiatica HOM05D007413 ORTHO05D009357 2.1e-06 55.8 91 39.6
AL5G19460 Arabidopsis lyrata HOM05D007413 ORTHO05D009357 2.7e-06 55.5 64 43.8
Migut.H00635 Erythranthe guttata HOM05D007413 ORTHO05D009357 2.7e-06 55.5 88 40.9
Nn4g23392 Nelumbo nucifera HOM05D007413 ORTHO05D009357 2.7e-06 55.5 59 49.2
ClCG07G007410 Citrullus lanatus HOM05D007413 ORTHO05D009357 3.6e-06 55.1 69 43.5
MELO3C024851.2 Cucumis melo HOM05D007413 ORTHO05D009357 4.7e-06 54.7 95 37.9
CiPaw.03G089400 Carya illinoinensis HOM05D007413 ORTHO05D009357 6.1e-06 54.3 96 40.6
AL7G51220 Arabidopsis lyrata HOM05D007413 ORTHO05D009357 8.0e-06 53.9 79 35.4


User provided reference genes

Program Settings