Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc14g0004990 Simmondsia chinensis HOM05D005485 ORTHO05D007343 1.6e-62 242.7 129 100.0
EL10Ac4g07981 Beta vulgaris HOM05D005485 ORTHO05D007343 2.5e-31 139.0 128 57.8
Ah.06g183040 Amaranthus hybridus HOM05D005485 ORTHO05D007343 3.4e-28 128.6 128 53.9
Sc03g0008940 Simmondsia chinensis HOM05D005485 ORTHO05D007343 1.8e-26 122.9 129 52.7
EL10Ac4g07712 Beta vulgaris HOM05D005485 ORTHO05D007343 3.5e-25 118.6 127 52.0
Sc03g0008990 Simmondsia chinensis HOM05D005485 ORTHO05D007343 4.5e-25 118.2 129 51.2
EL10Ac4g07717 Beta vulgaris HOM05D005485 ORTHO05D007343 1.0e-24 117.1 127 51.2
Ah.06g182180 Amaranthus hybridus HOM05D005485 ORTHO05D007343 1.7e-24 116.3 131 49.6
Ah.03g136680 Amaranthus hybridus HOM05D005485 ORTHO05D007343 2.9e-24 115.5 126 47.6
Hund23309 Selenicereus undatus HOM05D005485 ORTHO05D007343 1.1e-23 113.6 129 52.7
Ah.11g046570 Amaranthus hybridus HOM05D005485 ORTHO05D007343 1.5e-23 113.2 128 52.3
EL10Ac3g06092 Beta vulgaris HOM05D005485 ORTHO05D007343 9.5e-23 110.5 129 49.6
AUR62020319 Chenopodium quinoa HOM05D005485 ORTHO05D007343 9.5e-23 110.5 129 47.3
Sc05g0005310 Simmondsia chinensis HOM05D005485 ORTHO05D007343 4.7e-22 108.2 129 47.3
AUR62044278 Chenopodium quinoa HOM05D005485 ORTHO05D007343 1.0e-21 107.1 117 49.6
Sc16g0006460 Simmondsia chinensis HOM05D005485 ORTHO05D007343 1.4e-21 106.7 128 49.2
Hund23314 Selenicereus undatus HOM05D005485 ORTHO05D007343 1.8e-21 106.3 129 50.4
Ah.12g053500 Amaranthus hybridus HOM05D005485 ORTHO05D007343 4.0e-21 105.1 127 46.5
Sc16g0006490 Simmondsia chinensis HOM05D005485 ORTHO05D007343 4.0e-21 105.1 130 45.4
Ah.07g199850 Amaranthus hybridus HOM05D005485 ORTHO05D007343 6.8e-21 104.4 127 46.5
Sc03g0009050 Simmondsia chinensis HOM05D005485 ORTHO05D007343 6.8e-21 104.4 130 47.7
EL10Ac3g05678 Beta vulgaris HOM05D005485 ORTHO05D007343 8.9e-21 104.0 146 45.2
EL10Ac6g15586 Beta vulgaris HOM05D005485 ORTHO05D007343 8.9e-21 104.0 129 48.1
AUR62020371 Chenopodium quinoa HOM05D005485 ORTHO05D007343 8.9e-21 104.0 129 45.7
Ah.12g053540 Amaranthus hybridus HOM05D005485 ORTHO05D007343 1.2e-20 103.6 128 46.9
AUR62022538 Chenopodium quinoa HOM05D005485 ORTHO05D007343 1.2e-20 103.6 115 48.7
EL10Ac4g09247 Beta vulgaris HOM05D005485 ORTHO05D007343 1.5e-20 103.2 113 50.4
Sc03g0009010 Simmondsia chinensis HOM05D005485 ORTHO05D007343 2.0e-20 102.8 127 46.5
AUR62020370 Chenopodium quinoa HOM05D005485 ORTHO05D007343 7.5e-20 100.9 127 44.9
Ah.07g198250 Amaranthus hybridus HOM05D005485 ORTHO05D007343 1.3e-19 100.1 127 46.5
AUR62020485 Chenopodium quinoa HOM05D005485 ORTHO05D007343 1.7e-19 99.8 125 47.2
EL10Ac4g08005 Beta vulgaris HOM05D005485 ORTHO05D007343 2.2e-19 99.4 129 44.2
AUR62031850 Chenopodium quinoa HOM05D005485 ORTHO05D007343 2.2e-19 99.4 127 44.1
Ah.14g079930 Amaranthus hybridus HOM05D005485 ORTHO05D007343 2.9e-19 99.0 128 46.9
AUR62020486 Chenopodium quinoa HOM05D005485 ORTHO05D007343 2.9e-19 99.0 127 48.0
AUR62015643 Chenopodium quinoa HOM05D005485 ORTHO05D026998 3.7e-19 98.6 129 46.5
AUR62020487 Chenopodium quinoa HOM05D005485 ORTHO05D007343 3.7e-19 98.6 130 45.4
Ah.14g079940 Amaranthus hybridus HOM05D005485 ORTHO05D007343 4.9e-19 98.2 128 46.1
Ah.16g108490 Amaranthus hybridus HOM05D005485 ORTHO05D007343 4.9e-19 98.2 127 43.3
AUR62034285 Chenopodium quinoa HOM05D005485 ORTHO05D007343 6.4e-19 97.8 129 47.3
EL10Ac3g07381 Beta vulgaris HOM05D005485 ORTHO05D007343 8.3e-19 97.4 128 43.0
Ah.02g116590 Amaranthus hybridus HOM05D005485 ORTHO05D007343 1.4e-18 96.7 129 44.2
AUR62010290 Chenopodium quinoa HOM05D005485 ORTHO05D007343 4.1e-18 95.1 126 45.2
AUR62001099 Chenopodium quinoa HOM05D005485 ORTHO05D007343 7.0e-18 94.4 131 45.8
AUR62035401 Chenopodium quinoa HOM05D005485 ORTHO05D007343 9.2e-18 94.0 126 44.4
EL10Ac4g07974 Beta vulgaris HOM05D005485 ORTHO05D026998 1.2e-17 93.6 129 45.0
Ah.03g144460 Amaranthus hybridus HOM05D005485 ORTHO05D007343 4.6e-17 91.7 116 48.3
AUR62020336 Chenopodium quinoa HOM05D003198 ORTHO05D003716 5.9e-17 91.3 152 40.8
EL10Ac4g07715 Beta vulgaris HOM05D005485 ORTHO05D010325 1.3e-16 90.1 90 56.7
AUR62015889 Chenopodium quinoa HOM05D005485 ORTHO05D007343 1.3e-16 90.1 127 44.1
AUR62038097 Chenopodium quinoa HOM05D005485 ORTHO05D007343 1.7e-16 89.7 104 49.0
Ah.12g053520 Amaranthus hybridus HOM05D005485 ORTHO05D007343 1.1e-15 87.0 129 42.6
Hund23316 Selenicereus undatus HOM05D005485 ORTHO05D007343 1.1e-15 87.0 127 40.2
AUR62043968 Chenopodium quinoa HOM05D005485 ORTHO05D007343 1.5e-15 86.7 127 41.7
AUR62035968 Chenopodium quinoa HOM05D005485 ORTHO05D007343 1.9e-15 86.3 127 42.5
Ah.06g182120 Amaranthus hybridus HOM05D005485 ORTHO05D007343 4.3e-15 85.1 130 39.2
Ah.11g050920 Amaranthus hybridus HOM05D005485 ORTHO05D000152 9.5e-15 84.0 88 51.1
Sc16g0006480 Simmondsia chinensis HOM05D005485 ORTHO05D007343 1.6e-14 83.2 81 53.1
Hund21259 Selenicereus undatus HOM05D005485 ORTHO05D007343 3.6e-14 82.0 112 42.0
EL10Ac4g09276 Beta vulgaris HOM05D005485 ORTHO05D007343 1.1e-13 80.5 90 52.2
Sc16g0006410 Simmondsia chinensis HOM05D005485 ORTHO05D007343 2.3e-13 79.3 89 51.7
TAR627G0379 Trochodendron aralioides HOM05D000264 ORTHO05D000152 2.3e-13 79.3 68 57.4
AUR62000944 Chenopodium quinoa HOM05D005485 ORTHO05D007343 8.9e-13 77.4 133 39.1
AUR62020557 Chenopodium quinoa HOM05D005485 ORTHO05D007343 2.6e-12 75.9 65 60.0
EL10Ac4g08008 Beta vulgaris HOM05D005485 ORTHO05D007343 4.4e-12 75.1 84 48.8
Sc03g0009090 Simmondsia chinensis HOM05D005485 ORTHO05D007343 5.8e-12 74.7 88 46.6
Sc16g0006550 Simmondsia chinensis HOM05D005485 ORTHO05D007343 9.8e-12 73.9 101 42.6
TAR636G3343 Trochodendron aralioides HOM05D000264 ORTHO05D000152 3.7e-11 72.0 72 54.2
TAR627G0419 Trochodendron aralioides HOM05D000264 ORTHO05D000152 4.9e-11 71.6 76 52.6
TAR627G0592 Trochodendron aralioides HOM05D000264 ORTHO05D000152 6.4e-11 71.2 72 55.6
vmacro19094 Vaccinium macrocarpon HOM05D000264 ORTHO05D000152 8.3e-11 70.9 72 52.8
TAR636G0886 Trochodendron aralioides HOM05D000264 ORTHO05D000152 1.1e-10 70.5 72 52.8
Sc03g0009030 Simmondsia chinensis HOM05D005485 ORTHO05D007343 1.9e-10 69.7 91 47.3
EL10Ac4g09146 Beta vulgaris HOM05D007624 ORTHO05D010285 5.4e-10 68.2 70 54.3
EL10Ac9g22579 Beta vulgaris HOM05D005485 ORTHO05D007343 7.0e-10 67.8 70 51.4
AUR62005064 Chenopodium quinoa HOM05D005485 ORTHO05D007343 9.2e-10 67.4 62 58.1
AUR62029830 Chenopodium quinoa HOM05D007624 ORTHO05D010285 1.6e-09 66.6 115 39.1
AUR62004962 Chenopodium quinoa HOM05D007624 ORTHO05D010285 4.6e-09 65.1 70 50.0
AUR62004959 Chenopodium quinoa HOM05D007624 ORTHO05D000152 6.0e-09 64.7 87 44.8
Hma1.2p1_2500F.1_g323380 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 7.8e-09 64.3 73 52.1
Hund23280 Selenicereus undatus HOM05D007624 ORTHO05D010285 1.0e-08 63.9 108 37.0
Ah.12g053560 Amaranthus hybridus HOM05D005485 ORTHO05D007343 1.3e-08 63.5 63 57.1
EL10Ac3g05160 Beta vulgaris HOM05D007624 ORTHO05D010285 1.7e-08 63.2 109 36.7
AUR62001000 Chenopodium quinoa HOM05D002023 ORTHO05D002049 3.0e-08 62.4 70 48.6
EL10Ac9g22886 Beta vulgaris HOM05D007624 ORTHO05D010285 3.9e-08 62.0 77 45.5
Hund30584 Selenicereus undatus HOM05D005485 ORTHO05D007343 3.9e-08 62.0 68 48.5
Rhsim04G0029200 Rhododendron simsii HOM05D000264 ORTHO05D000152 5.0e-08 61.6 108 38.0
Sabra19G0137500 Salix brachista HOM05D000264 ORTHO05D000152 5.0e-08 61.6 60 56.7
Ah.08g218070 Amaranthus hybridus HOM05D007624 ORTHO05D010285 1.5e-07 60.1 69 49.3
AUR62032021 Chenopodium quinoa HOM05D005485 ORTHO05D007343 1.5e-07 60.1 59 55.9
AUR62044255 Chenopodium quinoa HOM05D005485 ORTHO05D007343 1.5e-07 60.1 59 55.9
RhsimUnG0230500 Rhododendron simsii HOM05D000264 ORTHO05D000152 1.5e-07 60.1 88 43.2
SEGI_27543 Sequoiadendron giganteum HOM05D000264 ORTHO05D000152 1.5e-07 60.1 74 41.9
EL10Ac7g18061 Beta vulgaris HOM05D007624 ORTHO05D010285 1.9e-07 59.7 67 49.3
Hma1.2p1_2500F.1_g323390 Hydrangea macrophylla HOM05D000264 ORTHO05D000152 2.5e-07 59.3 57 54.4
Hund00169 Selenicereus undatus HOM05D007624 ORTHO05D010285 2.5e-07 59.3 70 45.7
Sabra19G0071400 Salix brachista HOM05D000264 ORTHO05D000152 4.3e-07 58.5 59 55.9
Rhsim04G0028200 Rhododendron simsii HOM05D000264 ORTHO05D000152 7.3e-07 57.8 70 47.1
Duzib151G0730 Durio zibethinus HOM05D000264 ORTHO05D000152 9.5e-07 57.4 80 41.2
Sabra19G0116700 Salix brachista HOM05D000264 ORTHO05D000152 9.5e-07 57.4 58 55.2
Os11g0251200 Oryza sativa ssp. japonica HOM05D000264 ORTHO05D000152 1.2e-06 57.0 59 54.2
Rhsim04G0028600 Rhododendron simsii HOM05D000264 ORTHO05D000152 1.2e-06 57.0 64 48.4
Rhsim07G0250800 Rhododendron simsii HOM05D000264 ORTHO05D000152 1.2e-06 57.0 64 48.4
Sabra19G0137800 Salix brachista HOM05D000264 ORTHO05D000152 1.2e-06 57.0 60 51.7
EL10Ac8g19127 Beta vulgaris HOM05D007624 ORTHO05D010285 1.6e-06 56.6 70 42.9
EL10As7g23759 Beta vulgaris HOM05D007624 ORTHO05D010285 1.6e-06 56.6 70 44.3
Potri.019G109150 Populus trichocarpa HOM05D000264 ORTHO05D000152 1.6e-06 56.6 63 49.2
Rhsim04G0028300 Rhododendron simsii HOM05D000264 ORTHO05D000152 1.6e-06 56.6 62 53.2
Rhsim04G0028700 Rhododendron simsii HOM05D000264 ORTHO05D000152 1.6e-06 56.6 64 48.4
EL10Ac7g18063 Beta vulgaris HOM05D007624 ORTHO05D010285 2.1e-06 56.2 67 46.3
EL10Ac9g21582 Beta vulgaris HOM05D007624 ORTHO05D010285 2.1e-06 56.2 117 35.9
Sabra19G0115700 Salix brachista HOM05D000264 ORTHO05D000152 2.1e-06 56.2 60 51.7
EL10Ac7g18064 Beta vulgaris HOM05D007624 ORTHO05D010285 2.8e-06 55.8 69 44.9
AUR62035892 Chenopodium quinoa HOM05D000264 ORTHO05D000152 2.8e-06 55.8 68 41.2
Os11g0252400 Oryza sativa ssp. japonica HOM05D000264 ORTHO05D000152 2.8e-06 55.8 65 49.2
Potri.019G107700 Populus trichocarpa HOM05D000264 ORTHO05D000152 2.8e-06 55.8 69 52.2
Manes.14G151654 Manihot esculenta HOM05D000264 ORTHO05D000152 3.6e-06 55.5 76 44.7
Potri.019G105900 Populus trichocarpa HOM05D000264 ORTHO05D000152 3.6e-06 55.5 69 52.2
Potri.019G107800 Populus trichocarpa HOM05D000264 ORTHO05D000152 3.6e-06 55.5 69 52.2
Rhsim04G0029100 Rhododendron simsii HOM05D000264 ORTHO05D000152 3.6e-06 55.5 137 31.4
Sabra19G0137200 Salix brachista HOM05D021030 ORTHO05D000152 3.6e-06 55.5 65 50.8
Sabra19G0137300 Salix brachista HOM05D021030 ORTHO05D000152 3.6e-06 55.5 65 50.8
TAR627G0568 Trochodendron aralioides HOM05D000264 ORTHO05D000152 3.6e-06 55.5 67 41.8
Zm00001eb201350 Zea mays HOM05D000264 ORTHO05D000152 3.6e-06 55.5 73 45.2
ATR0794G141 Amborella trichopoda HOM05D000264 ORTHO05D000152 4.7e-06 55.1 138 29.7
EL10Ac4g09124 Beta vulgaris HOM05D007624 ORTHO05D010285 4.7e-06 55.1 71 42.3
AUR62017631 Chenopodium quinoa HOM05D005485 ORTHO05D000152 4.7e-06 55.1 68 45.6
MD02G1117100 Malus domestica HOM05D000264 ORTHO05D000152 4.7e-06 55.1 74 41.9
Manes.14G151600 Manihot esculenta HOM05D000264 ORTHO05D000152 4.7e-06 55.1 66 45.5
Rhsim04G0028000 Rhododendron simsii HOM05D000264 ORTHO05D009284 4.7e-06 55.1 62 51.6
Sabra19G0115500 Salix brachista HOM05D000264 ORTHO05D000152 4.7e-06 55.1 57 52.6
EL10Ac4g09157 Beta vulgaris HOM05D007624 ORTHO05D000152 6.2e-06 54.7 67 41.8
AUR62017630 Chenopodium quinoa HOM05D002336 ORTHO05D002526 6.2e-06 54.7 71 43.7
Rhsim04G0034200 Rhododendron simsii HOM05D000264 ORTHO05D000152 6.2e-06 54.7 61 47.5
Sabra19G0136600 Salix brachista HOM05D000264 ORTHO05D000152 6.2e-06 54.7 63 47.6
Sabra19G0137100 Salix brachista HOM05D000264 ORTHO05D000152 6.2e-06 54.7 58 51.7
Sc19g0005690 Simmondsia chinensis HOM05D005485 ORTHO05D007343 6.2e-06 54.7 66 40.9
Zm00001eb116150 Zea mays HOM05D000264 ORTHO05D000152 6.2e-06 54.7 65 49.2
EL10Ac3g06720 Beta vulgaris HOM05D000264 ORTHO05D000152 8.1e-06 54.3 68 39.7
AUR62004787 Chenopodium quinoa HOM05D005485 ORTHO05D007343 8.1e-06 54.3 55 56.4
AUR62035354 Chenopodium quinoa HOM05D000264 ORTHO05D000152 8.1e-06 54.3 68 41.2
Os11g0251400 Oryza sativa ssp. japonica HOM05D000264 ORTHO05D000152 8.1e-06 54.3 65 49.2
Os11g0269500 Oryza sativa ssp. japonica HOM05D000264 ORTHO05D000152 8.1e-06 54.3 65 49.2
Sed0028147 Sechium edule HOM05D000454 ORTHO05D002637 8.1e-06 54.3 127 30.7
GSVIVG01036243001 Vitis vinifera HOM05D000264 ORTHO05D000152 8.1e-06 54.3 67 43.3


User provided reference genes

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