Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc14g0004980 Simmondsia chinensis HOM05D007109 ORTHO05D008813 2.3e-150 535.8 331 100.0
AUR62023101 Chenopodium quinoa HOM05D007109 ORTHO05D008813 2.3e-33 147.1 337 36.5
Sabra09G0040900 Salix brachista HOM05D007109 ORTHO05D008813 4.0e-33 146.4 339 32.4
AUR62009423 Chenopodium quinoa HOM05D007109 ORTHO05D008813 1.2e-32 144.8 337 35.6
Ah.10g038560 Amaranthus hybridus HOM05D007109 ORTHO05D008813 4.9e-31 139.4 339 34.5
Dinv07428 Davidia involucrata HOM05D007109 ORTHO05D008813 1.9e-30 137.5 333 32.7
Potri.009G055800 Populus trichocarpa HOM05D007109 ORTHO05D008813 2.1e-29 134.0 346 32.1
Atru.chr11.2527 Acer truncatum HOM05D007109 ORTHO05D008813 3.5e-29 133.3 366 29.2
Ciclev10032181m.g Citrus clementina HOM05D007109 ORTHO05D008813 7.8e-29 132.1 338 30.8
Prupe.2G023200 Prunus persica HOM05D007109 ORTHO05D008813 7.8e-29 132.1 337 33.8
Duzib138G1369 Durio zibethinus HOM05D007109 ORTHO05D008813 8.6e-28 128.6 320 33.1
Duzib268G1698 Durio zibethinus HOM05D007109 ORTHO05D008813 8.6e-28 128.6 336 31.5
QL04p010443 Quercus lobata HOM05D007109 ORTHO05D008813 1.1e-27 128.3 331 32.0
CiPaw.13G008200 Carya illinoinensis HOM05D007109 ORTHO05D008813 1.5e-27 127.9 345 33.0
Duzib133G0385 Durio zibethinus HOM05D007109 ORTHO05D008813 4.3e-27 126.3 352 31.2
Manes.10G135500 Manihot esculenta HOM05D007109 ORTHO05D008813 4.3e-27 126.3 323 32.2
Cc02_g28960 Coffea canephora HOM05D007109 ORTHO05D008813 7.3e-27 125.6 344 33.4
RcHm_v2.0_Chr1g0318291 Rosa chinensis HOM05D007109 ORTHO05D008813 1.1e-25 121.7 326 32.8
Nn7g36341 Nelumbo nucifera HOM05D007109 ORTHO05D008813 3.1e-25 120.2 336 32.1
COL.COLO4_12331 Corchorus olitorius HOM05D007109 ORTHO05D008813 5.2e-25 119.4 333 29.7
Rhsim01G0124900 Rhododendron simsii HOM05D007109 ORTHO05D008813 5.2e-25 119.4 331 32.0
THA.LOC104827430 Tarenaya hassleriana HOM05D007109 ORTHO05D008813 8.9e-25 118.6 330 29.7
Thecc.01G404600 Theobroma cacao HOM05D007109 ORTHO05D008813 8.9e-25 118.6 335 30.4
Actinidia19426 Actinidia chinensis HOM05D007109 ORTHO05D008813 2.0e-24 117.5 321 29.9
Cpa.g.c33908 Carica papaya HOM05D007109 ORTHO05D008813 3.4e-24 116.7 328 31.7
Phvul.005G036000 Phaseolus vulgaris HOM05D007109 ORTHO05D008813 3.4e-24 116.7 336 29.5
Lalb_Chr25g0282601 Lupinus albus HOM05D007109 ORTHO05D008813 4.4e-24 116.3 341 28.7
CiPaw.15G135600 Carya illinoinensis HOM05D007109 ORTHO05D008813 7.6e-24 115.5 344 31.1
Cfa010821 Carpinus fangiana HOM05D007109 ORTHO05D008813 1.7e-23 114.4 347 29.4
Cpa.g.sc125.54 Carica papaya HOM05D007109 ORTHO05D008813 2.2e-23 114.0 328 31.7
CiPaw.14G003600 Carya illinoinensis HOM05D007109 ORTHO05D008813 2.2e-23 114.0 335 31.6
TPR.G14571 Trifolium pratense HOM05D007109 ORTHO05D008813 2.2e-23 114.0 331 30.5
Glyma.04G142400 Glycine max HOM05D007109 ORTHO05D008813 1.1e-22 111.7 349 30.1
FAN03G1693 Fragaria x ananassa HOM05D007109 ORTHO05D008813 1.4e-22 111.3 340 31.8
MD02G1301300 Malus domestica HOM05D007109 ORTHO05D008813 1.4e-22 111.3 338 31.1
MD07G1022600 Malus domestica HOM05D007109 ORTHO05D008813 2.4e-22 110.5 347 31.1
Rhsim07G0059100 Rhododendron simsii HOM05D007109 ORTHO05D008813 2.4e-22 110.5 342 30.1
Oeu049473.1 Olea europaea HOM05D007109 ORTHO05D008813 3.2e-22 110.2 325 29.5
MSTRG.20556 Avicennia marina HOM05D007109 ORTHO05D008813 4.1e-22 109.8 319 32.0
Glyma.11G159021 Glycine max HOM05D007109 ORTHO05D008813 4.1e-22 109.8 340 30.9
Oeu014598.1 Olea europaea HOM05D007109 ORTHO05D008813 7.1e-22 109.0 320 30.0
MD07G1022700 Malus domestica HOM05D007109 ORTHO05D008813 9.2e-22 108.6 341 30.8
Medtr3g028060 Medicago truncatula HOM05D007109 ORTHO05D008813 9.2e-22 108.6 346 30.3
arahy.Tifrunner.gnm1.ann1.K9M8RY Arachis hypogaea HOM05D007109 ORTHO05D008813 2.1e-21 107.5 368 31.2
HanXRQChr01g0007891 Helianthus annuus HOM05D007109 ORTHO05D008813 2.7e-21 107.1 331 28.1
Lsat_1_v5_gn_1_104740 Lactuca sativa HOM05D007109 ORTHO05D008813 2.7e-21 107.1 335 26.6
Gorai.004G169100 Gossypium raimondii HOM05D007109 ORTHO05D008813 3.5e-21 106.7 350 27.7
Hma1.2p1_0269F.1_g107760 Hydrangea macrophylla HOM05D007109 ORTHO05D008813 3.5e-21 106.7 342 30.7
Ca_27474_v3 Cicer arietinum L. HOM05D007109 ORTHO05D008813 4.6e-21 106.3 335 30.1
Gohir.D08G162700 Gossypium hirsutum HOM05D007109 ORTHO05D008813 7.8e-21 105.5 346 27.5
Lsat_1_v5_gn_1_104720 Lactuca sativa HOM05D007109 ORTHO05D008813 7.8e-21 105.5 326 27.9
Lj3g0012595 Lotus japonicus HOM05D007109 ORTHO05D008813 1.0e-20 105.1 326 28.5
TWI73G0029 Tripterygium wilfordii HOM05D007109 ORTHO05D008813 1.0e-20 105.1 320 28.4
Manes.07G011500 Manihot esculenta HOM05D007109 ORTHO05D008813 1.3e-20 104.8 337 28.8
FvH4_7g01730 Fragaria vesca HOM05D007109 ORTHO05D008813 2.3e-20 104.0 321 29.3
FAN06G2427 Fragaria x ananassa HOM05D007109 ORTHO05D008813 2.3e-20 104.0 321 29.3
ECA248G3518 Erigeron canadensis HOM05D007109 ORTHO05D008813 3.0e-20 103.6 325 26.2
PGSC0003DMG400041994 Solanum tuberosum HOM05D007109 ORTHO05D008813 3.0e-20 103.6 347 29.4
PGSC0003DMG402006771 Solanum tuberosum HOM05D007109 ORTHO05D008813 3.0e-20 103.6 347 29.4
CAN.G909.14 Capsicum annuum HOM05D007109 ORTHO05D008813 6.6e-20 102.4 360 30.0
ClCG10G012150 Citrullus lanatus HOM05D007109 ORTHO05D008813 6.6e-20 102.4 340 29.1
Peaxi162Scf01108g00310 Petunia axillaris HOM05D007109 ORTHO05D008813 1.1e-19 101.7 344 29.4
Ca_26440_v3 Cicer arietinum L. HOM05D007109 ORTHO05D008813 3.3e-19 100.1 319 28.8
TAR633G0887 Trochodendron aralioides HOM05D007109 ORTHO05D008813 3.3e-19 100.1 328 31.1
Migut.B01258 Erythranthe guttata HOM05D007109 ORTHO05D008813 4.3e-19 99.8 324 28.7
Nitab4.5_0004222g0010 Nicotiana tabacum HOM05D007109 ORTHO05D008813 4.3e-19 99.8 359 29.0
MSTRG.5044 Avicennia marina HOM05D007109 ORTHO05D008813 5.6e-19 99.4 325 32.3
ClCG09G004450 Citrullus lanatus HOM05D007109 ORTHO05D008813 5.6e-19 99.4 342 28.9
Nitab4.5_0001244g0020 Nicotiana tabacum HOM05D007109 ORTHO05D008813 5.6e-19 99.4 358 28.5
Sed0006814 Sechium edule HOM05D007109 ORTHO05D008813 5.6e-19 99.4 341 28.4
Psat7g150920 Pisum sativum HOM05D007109 ORTHO05D008813 9.6e-19 98.6 339 28.9
Sopen01g034880 Solanum pennellii HOM05D007109 ORTHO05D008813 9.6e-19 98.6 333 29.4
CANSAT80G2748 Cannabis sativa HOM05D007109 ORTHO05D008813 1.2e-18 98.2 311 28.0
Gohir.A08G141600 Gossypium hirsutum HOM05D007109 ORTHO05D008813 1.2e-18 98.2 166 36.7
MELO3C024000.2 Cucumis melo HOM05D007109 ORTHO05D008813 1.6e-18 97.8 328 29.6
Eucgr.G03285 Eucalyptus grandis HOM05D007109 ORTHO05D008813 1.6e-18 97.8 338 28.1
TWI09G0588 Tripterygium wilfordii HOM05D007109 ORTHO05D008813 2.1e-18 97.4 341 27.0
Lj3g0020735 Lotus japonicus HOM05D007109 ORTHO05D008813 2.8e-18 97.1 323 29.1
Lalb_Chr01g0000491 Lupinus albus HOM05D007109 ORTHO05D008813 3.6e-18 96.7 367 27.8
Medtr0003s0580 Medicago truncatula HOM05D007109 ORTHO05D008813 3.6e-18 96.7 326 28.5
vmacro13701 Vaccinium macrocarpon HOM05D007109 ORTHO05D008813 8.1e-18 95.5 331 28.7
vmacro13699 Vaccinium macrocarpon HOM05D007109 ORTHO05D008813 2.4e-17 94.0 342 28.7
FAN10G2826 Fragaria x ananassa HOM05D007109 ORTHO05D008813 5.2e-17 92.8 166 36.1
Sed0007712 Sechium edule HOM05D007109 ORTHO05D008813 5.2e-17 92.8 340 28.5
Actinidia23253 Actinidia chinensis HOM05D007109 ORTHO05D008813 2.6e-16 90.5 277 28.2
TPR.G8349 Trifolium pratense HOM05D007109 ORTHO05D008813 3.4e-16 90.1 324 27.8
Migut.B01259 Erythranthe guttata HOM05D007109 ORTHO05D008813 9.9e-16 88.6 286 29.0
MSTRG.17005 Avicennia marina HOM05D007109 ORTHO05D008813 1.7e-15 87.8 342 28.7
Sed0023192 Sechium edule HOM05D007109 ORTHO05D008813 2.2e-15 87.4 346 29.5
SGA_v2.0_scaffold354G49753 Striga asiatica HOM05D007109 ORTHO05D008813 4.9e-15 86.3 337 26.7
Solyc01g087980.4 Solanum lycopersicum HOM05D007109 ORTHO05D008813 6.4e-15 85.9 133 38.3
CsaV3_7G030690 Cucumis sativus L. HOM05D007109 ORTHO05D008813 3.2e-14 83.6 345 27.8
MELO3C023587.2 Cucumis melo HOM05D007109 ORTHO05D008813 2.1e-13 80.9 143 35.7
Gohir.A12G100450 Gossypium hirsutum HOM05D007109 ORTHO05D008813 3.5e-13 80.1 128 35.2
Sed0019738 Sechium edule HOM05D007109 ORTHO05D008813 7.8e-13 79.0 334 25.1
Medtr3g034370 Medicago truncatula HOM05D007109 ORTHO05D008813 1.3e-12 78.2 273 28.9
Actinidia08354 Actinidia chinensis HOM05D007109 ORTHO05D008813 3.0e-12 77.0 74 47.3
Actinidia25349 Actinidia chinensis HOM05D007109 ORTHO05D008813 3.0e-12 77.0 74 47.3
VMungo1080G0219 Vigna mungo HOM05D007109 ORTHO05D008813 3.0e-12 77.0 277 27.8
TPR.G40170 Trifolium pratense HOM05D007109 ORTHO05D008813 1.5e-11 74.7 89 48.3
Solyc04g050200.1 Solanum lycopersicum HOM05D007109 ORTHO05D008813 5.6e-11 72.8 142 35.9
unitig_22.g5431 Utricularia gibba HOM05D007109 ORTHO05D008813 8.1e-10 68.9 89 40.4
SalBow5G4465 Salvia bowleyana HOM05D007109 ORTHO05D008813 4.0e-09 66.6 113 34.5
ATR0782G062 Amborella trichopoda HOM05D002440 ORTHO05D008813 2.0e-08 64.3 94 34.0
SGA_v2.0_scaffold4G02475 Striga asiatica HOM05D007109 ORTHO05D008813 1.7e-07 61.2 314 26.1
SalBow5G4816 Salvia bowleyana HOM05D007109 ORTHO05D008813 3.8e-07 60.1 109 34.9
Sed0020411 Sechium edule HOM05D002440 ORTHO05D002576 6.4e-07 59.3 129 31.0
ClCG06G003470 Citrullus lanatus HOM05D002440 ORTHO05D002576 7.1e-06 55.8 106 34.0
Medtr3g034410 Medicago truncatula HOM05D007109 ORTHO05D008813 7.1e-06 55.8 154 31.8
Sed0005808 Sechium edule HOM05D002440 ORTHO05D002576 7.1e-06 55.8 140 31.4


User provided reference genes

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