Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc14g0004740 Simmondsia chinensis HOM05D001128 ORTHO05D000721 1.0e-146 523.5 285 100.0
Sc11g0007590 Simmondsia chinensis HOM05D001128 ORTHO05D000721 4.5e-25 119.4 315 33.7
Sc10g0001950 Simmondsia chinensis HOM05D001128 ORTHO05D000721 5.2e-21 105.9 380 31.1
Ah.10g036830 Amaranthus hybridus HOM05D001128 ORTHO05D000721 8.2e-19 98.6 356 30.6
AUR62022804 Chenopodium quinoa HOM05D001128 ORTHO05D000721 1.6e-17 94.4 335 31.3
Hund16030 Selenicereus undatus HOM05D001128 ORTHO05D000721 6.5e-16 89.0 353 30.9
Hund13813 Selenicereus undatus HOM05D001128 ORTHO05D000721 1.5e-15 87.8 369 28.5
AUR62012167 Chenopodium quinoa HOM05D001128 ORTHO05D000721 4.2e-15 86.3 351 30.5
Duzib128G2050 Durio zibethinus HOM05D001128 ORTHO05D000721 4.4e-12 76.3 353 27.8
Thecc.10G030500 Theobroma cacao HOM05D001128 ORTHO05D000721 1.8e-10 70.9 351 27.1
EL10Ac2g04665 Beta vulgaris HOM05D001128 ORTHO05D000721 2.4e-10 70.5 363 29.5
Gohir.D10G238700 Gossypium hirsutum HOM05D001128 ORTHO05D000721 2.4e-10 70.5 344 26.7
COL.COLO4_25581 Corchorus olitorius HOM05D001128 ORTHO05D000721 7.0e-10 68.9 358 26.8
Dinv16282 Davidia involucrata HOM05D001128 ORTHO05D000721 7.0e-10 68.9 382 27.5
Gohir.A10G226400 Gossypium hirsutum HOM05D001128 ORTHO05D000721 7.0e-10 68.9 350 26.6
Gorai.011G274600 Gossypium raimondii HOM05D001128 ORTHO05D000721 1.2e-09 68.2 350 26.3
Lj1A945T19 Lonicera japonica HOM05D001128 ORTHO05D000721 3.5e-09 66.6 274 30.7
CiPaw.01G293700 Carya illinoinensis HOM05D001128 ORTHO05D000721 1.0e-08 65.1 364 25.0
Dinv34448 Davidia involucrata HOM05D001128 ORTHO05D000721 1.7e-08 64.3 346 28.3
Duzib106G0526 Durio zibethinus HOM05D001128 ORTHO05D000721 5.0e-08 62.8 354 27.1
vmacro07011 Vaccinium macrocarpon HOM05D001128 ORTHO05D000721 6.5e-08 62.4 256 29.3
CSS0047983 Camellia sinensis var. sinensis HOM05D001128 ORTHO05D000721 8.5e-08 62.0 363 28.1
QL08p062120 Quercus lobata HOM05D001128 ORTHO05D000721 1.5e-07 61.2 292 26.0
Gohir.A05G346700 Gossypium hirsutum HOM05D001128 ORTHO05D000721 4.2e-07 59.7 165 32.7
FAN06G3577 Fragaria x ananassa HOM05D001128 ORTHO05D000721 7.2e-07 58.9 245 29.8
FvH4_7g23630 Fragaria vesca HOM05D001128 ORTHO05D000721 1.2e-06 58.2 245 29.4
Gorai.012G073700 Gossypium raimondii HOM05D001128 ORTHO05D000721 1.2e-06 58.2 165 32.7
FAN06G2816 Fragaria x ananassa HOM05D001128 ORTHO05D000721 1.6e-06 57.8 245 29.4
RcHm_v2.0_Chr1g0368901 Rosa chinensis HOM05D001128 ORTHO05D000721 2.7e-06 57.0 289 25.3
vmacro20201 Vaccinium macrocarpon HOM05D001128 ORTHO05D000721 2.7e-06 57.0 317 28.7
FAN03G2145 Fragaria x ananassa HOM05D001128 ORTHO05D000721 8.0e-06 55.5 250 28.0
Gohir.D04G065500 Gossypium hirsutum HOM05D001128 ORTHO05D000721 8.0e-06 55.5 163 32.5


User provided reference genes

Program Settings