Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc14g0004510 Simmondsia chinensis HOM05D004345 ORTHO05D005192 9.4e-68 260.0 126 100.0
Prupe.2G050600 Prunus persica HOM05D004345 ORTHO05D005192 1.5e-12 76.6 124 37.9
Ca_09724_v3 Cicer arietinum L. HOM05D004345 ORTHO05D005192 3.3e-12 75.5 115 40.0
Sed0027926 Sechium edule HOM05D004345 ORTHO05D005192 3.3e-12 75.5 118 34.7
COL.COLO4_14552 Corchorus olitorius HOM05D004345 ORTHO05D005192 5.6e-12 74.7 116 39.7
Manes.14G172500 Manihot esculenta HOM05D004345 ORTHO05D005192 5.6e-12 74.7 122 36.1
Potri.012G041300 Populus trichocarpa HOM05D004345 ORTHO05D005192 9.6e-12 73.9 114 36.0
QL09p016785 Quercus lobata HOM05D004345 ORTHO05D005192 9.6e-12 73.9 114 40.4
Hund17623 Selenicereus undatus HOM05D004345 ORTHO05D005192 9.6e-12 73.9 130 31.5
Gohir.A11G329500 Gossypium hirsutum HOM05D004345 ORTHO05D005192 2.1e-11 72.8 112 37.5
CsaV3_1G046170 Cucumis sativus L. HOM05D004345 ORTHO05D005192 4.8e-11 71.6 118 35.6
Nn1g01729 Nelumbo nucifera HOM05D004345 ORTHO05D005192 4.8e-11 71.6 131 35.1
TWI31G0574 Tripterygium wilfordii HOM05D004345 ORTHO05D005192 8.1e-11 70.9 120 35.0
Gohir.D11G348700 Gossypium hirsutum HOM05D004345 ORTHO05D005192 1.4e-10 70.1 112 36.6
TWI60G1145 Tripterygium wilfordii HOM05D004345 ORTHO05D005192 1.8e-10 69.7 113 33.6
Aqoxy4G03088 Aquilegia oxysepala HOM05D004345 ORTHO05D005192 3.1e-10 68.9 127 33.9
QL07p000534 Quercus lobata HOM05D004345 ORTHO05D005192 4.0e-10 68.6 114 37.7
CANSAT21G1743 Cannabis sativa HOM05D004345 ORTHO05D005192 9.0e-10 67.4 121 36.4
Cc07_g15690 Coffea canephora HOM05D004345 ORTHO05D005192 9.0e-10 67.4 116 34.5
Sabra12G0028400 Salix brachista HOM05D004345 ORTHO05D005192 2.0e-09 66.2 114 33.3
FAN18G0597 Fragaria x ananassa HOM05D004345 ORTHO05D005192 2.6e-09 65.9 123 31.7
Gorai.007G379000 Gossypium raimondii HOM05D004345 ORTHO05D005192 2.6e-09 65.9 112 35.7
RcHm_v2.0_Chr7g0216331 Rosa chinensis HOM05D004345 ORTHO05D005192 2.6e-09 65.9 123 32.5
Glyma.02G144000 Glycine max HOM05D004345 ORTHO05D005192 4.5e-09 65.1 114 36.8
Glyma.10G030100 Glycine max HOM05D004345 ORTHO05D005192 9.9e-09 63.9 114 35.1
CiPaw.12G046900 Carya illinoinensis HOM05D004345 ORTHO05D005192 1.3e-08 63.5 116 37.9
MD04G1026400 Malus domestica HOM05D004345 ORTHO05D005192 1.3e-08 63.5 120 33.3
MELO3C021732.2 Cucumis melo HOM05D004345 ORTHO05D005192 2.2e-08 62.8 118 31.4
TPR.G10330 Trifolium pratense HOM05D004345 ORTHO05D005192 2.2e-08 62.8 114 37.7
CiPaw.12G040000 Carya illinoinensis HOM05D004345 ORTHO05D005192 2.9e-08 62.4 115 36.5
FvH4_5g25850 Fragaria vesca HOM05D004345 ORTHO05D005192 2.9e-08 62.4 123 30.1
CiPaw.16G081600 Carya illinoinensis HOM05D004345 ORTHO05D005192 3.8e-08 62.0 123 32.5
Lj5g0026700 Lotus japonicus HOM05D004345 ORTHO05D005192 8.4e-08 60.8 114 37.7
Psat5g128760 Pisum sativum HOM05D004345 ORTHO05D005192 8.4e-08 60.8 114 36.8
Ciclev10000213m.g Citrus clementina HOM05D004345 ORTHO05D005192 1.1e-07 60.5 116 35.3
FAN04G0730 Fragaria x ananassa HOM05D004345 ORTHO05D005192 1.1e-07 60.5 123 30.1
FAN13G0999 Fragaria x ananassa HOM05D004345 ORTHO05D005192 1.9e-07 59.7 123 30.1
Rhsim12G0029000 Rhododendron simsii HOM05D004345 ORTHO05D005192 2.4e-07 59.3 109 39.4
VMungo1215G1527 Vigna mungo HOM05D004345 ORTHO05D005192 3.2e-07 58.9 108 33.3
Cfa020657 Carpinus fangiana HOM05D004345 ORTHO05D005192 4.2e-07 58.5 131 34.4
Cpa.g.sc3060.1 Carica papaya HOM05D004345 ORTHO05D005192 5.5e-07 58.2 121 31.4
Cpa.g.sc4881.1 Carica papaya HOM05D004345 ORTHO05D005192 5.5e-07 58.2 121 31.4
Lalb_Chr21g0307461 Lupinus albus HOM05D004345 ORTHO05D005192 7.1e-07 57.8 121 32.2
Medtr3g069120 Medicago truncatula HOM05D004345 ORTHO05D005192 9.3e-07 57.4 115 34.8
Actinidia34666 Actinidia chinensis HOM05D004345 ORTHO05D005192 1.6e-06 56.6 103 34.0
VMungo1127G1998 Vigna mungo HOM05D004345 ORTHO05D005192 1.6e-06 56.6 110 32.7
MBI07_g37626_MAGBIO Magnolia biondii HOM05D004345 ORTHO05D005192 2.1e-06 56.2 69 40.6
Oeu011014.1 Olea europaea HOM05D004345 ORTHO05D005192 2.1e-06 56.2 117 30.8
QL04p019450 Quercus lobata HOM05D004345 ORTHO05D005192 3.5e-06 55.5 100 38.0
MBI07_g11743_MAGBIO Magnolia biondii HOM05D004345 ORTHO05D005192 4.6e-06 55.1 66 40.9


User provided reference genes

Program Settings