Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc14g0004160 Simmondsia chinensis HOM05D007167 ORTHO05D013628 0.0e+00 1143.6 568 100.0
Sc02g0009550 Simmondsia chinensis HOM05D007167 ORTHO05D013628 4.4e-306 1053.9 536 97.6
Sc14g0003700 Simmondsia chinensis HOM05D007167 ORTHO05D013628 8.3e-305 1049.7 519 100.0
Sc14g0003870 Simmondsia chinensis HOM05D007167 ORTHO05D013628 8.3e-305 1049.7 519 100.0
Sc14g0004320 Simmondsia chinensis HOM05D007167 ORTHO05D013628 2.4e-304 1048.1 519 99.8
Sc14g0004270 Simmondsia chinensis HOM05D007167 ORTHO05D000205 2.7e-303 1044.6 521 99.2
ScUNg0000250 Simmondsia chinensis HOM05D007167 ORTHO05D013628 3.5e-303 1044.3 519 99.4
Sc18g0006310 Simmondsia chinensis HOM05D007167 ORTHO05D001745 2.3e-302 1041.6 519 99.6
Sc14g0004250 Simmondsia chinensis HOM05D007167 ORTHO05D013628 8.6e-294 1013.1 519 97.3
ScUNg0001330 Simmondsia chinensis HOM05D007167 ORTHO05D013628 8.0e-292 1006.5 519 97.1
ScUNg0000910 Simmondsia chinensis HOM05D007167 ORTHO05D013628 1.3e-265 919.5 462 98.9
ScUNg0000790 Simmondsia chinensis HOM05D007167 ORTHO05D013628 2.7e-247 858.6 475 90.7
Sc14g0003760 Simmondsia chinensis HOM05D007167 ORTHO05D013628 2.5e-184 649.4 361 90.0
ScUNg0000780 Simmondsia chinensis HOM05D007167 ORTHO05D013628 2.1e-183 646.4 313 99.7
ScUNg0001250 Simmondsia chinensis HOM05D007167 ORTHO05D013628 1.7e-169 600.1 290 100.0
Sc14g0003940 Simmondsia chinensis HOM05D007167 ORTHO05D013628 6.1e-106 389.0 259 78.0
Sc18g0006340 Simmondsia chinensis HOM05D007167 ORTHO05D000922 3.3e-96 356.7 168 100.0
ScUNg0001050 Simmondsia chinensis HOM05D007167 ORTHO05D001679 3.3e-96 356.7 168 100.0
ScUNg0001450 Simmondsia chinensis HOM05D007167 ORTHO05D001745 1.8e-73 281.2 132 100.0
ScUNg0000170 Simmondsia chinensis HOM05D007167 ORTHO05D000922 1.4e-65 255.0 121 100.0
Sc14g0004120 Simmondsia chinensis HOM05D000099 ORTHO05D000205 9.2e-54 215.7 137 83.2
ScUNg0000050 Simmondsia chinensis HOM05D007167 ORTHO05D000922 2.8e-42 177.6 83 100.0
Sc14g0004200 Simmondsia chinensis HOM05D000099 ORTHO05D001070 2.4e-38 164.5 78 100.0
ScUNg0000940 Simmondsia chinensis HOM05D007167 ORTHO05D013628 9.3e-30 136.0 79 78.5
Sc21g0003530 Simmondsia chinensis HOM05D008177 ORTHO05D010128 1.7e-28 131.7 92 68.5
Sc14g0003330 Simmondsia chinensis HOM05D007167 ORTHO05D010128 1.6e-21 108.6 77 72.7
Sc06g0003840 Simmondsia chinensis HOM05D007167 ORTHO05D004854 4.8e-18 97.1 71 69.0
ScUNg0000970 Simmondsia chinensis HOM05D007167 ORTHO05D009885 1.2e-16 92.4 61 80.3
Sc07g0005250 Simmondsia chinensis HOM05D007167 ORTHO05D001679 6.7e-12 76.6 64 62.5
Sc21g0003540 Simmondsia chinensis HOM05D007167 ORTHO05D000922 2.1e-10 71.6 213 36.2
ScUNg0000320 Simmondsia chinensis HOM05D007167 ORTHO05D013628 8.2e-10 69.7 58 60.3
CSS0027849 Camellia sinensis var. sinensis HOM05D001828 ORTHO05D001745 3.4e-08 64.3 179 35.8
arahy.Tifrunner.gnm1.ann1.62DUUZ Arachis hypogaea HOM05D003608 ORTHO05D000917 5.5e-06 57.0 237 32.9
arahy.Tifrunner.gnm1.ann1.J69F6A Arachis hypogaea HOM05D003608 ORTHO05D000917 9.3e-06 56.2 106 43.4


User provided reference genes

Program Settings