Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc14g0004110 Simmondsia chinensis HOM05D000920 ORTHO05D004854 7.5e-28 126.3 58 100.0
ScUNg0000740 Simmondsia chinensis HOM05D000920 ORTHO05D004854 7.5e-28 126.3 58 100.0
ScUNg0001120 Simmondsia chinensis HOM05D000920 ORTHO05D004854 7.5e-28 126.3 58 100.0
ScUNg0001170 Simmondsia chinensis HOM05D000920 ORTHO05D004854 7.5e-28 126.3 58 100.0
BcaB04g16911 Brassica carinata HOM05D000920 ORTHO05D004854 6.4e-27 123.2 58 96.6
A09p31370 Brassica napus HOM05D000920 ORTHO05D004854 8.3e-27 122.9 57 96.5
BNapus_Darmor_BZH_scaffold_107p00020 Brassica napus HOM05D000920 ORTHO05D004854 8.3e-27 122.9 57 96.5
BNapus_Darmor_BZH_scaffold_107p00050 Brassica napus HOM05D000920 ORTHO05D004854 8.3e-27 122.9 57 96.5
A06p24460 Brassica napus HOM05D000920 ORTHO05D004854 1.1e-26 122.5 57 96.5
Oeu020383.1 Olea europaea HOM05D000920 ORTHO05D004854 1.1e-26 122.5 56 98.2
PGSC0003DMG400024428 Solanum tuberosum HOM05D000920 ORTHO05D004854 1.8e-26 121.7 58 94.8
unitig_548.g34904 Utricularia gibba HOM05D000920 ORTHO05D004854 1.8e-26 121.7 58 96.6
unitig_550.g34863 Utricularia gibba HOM05D000920 ORTHO05D004854 1.8e-26 121.7 58 96.6
unitig_676.g29553 Utricularia gibba HOM05D000920 ORTHO05D004854 1.8e-26 121.7 58 96.6
unitig_99.g29794 Utricularia gibba HOM05D000920 ORTHO05D004854 1.8e-26 121.7 58 96.6
A06p25510 Brassica napus HOM05D000920 ORTHO05D004854 2.4e-26 121.3 57 94.7
A06p24390 Brassica napus HOM05D000920 ORTHO05D004854 3.2e-26 120.9 58 94.8
A06p24060 Brassica napus HOM05D000920 ORTHO05D004854 4.1e-26 120.6 58 94.8
BcaNung05884 Brassica carinata HOM05D000920 ORTHO05D004854 7.0e-26 119.8 56 94.6
BNapus_Darmor_BZH_scaffold_107p00560 Brassica napus HOM05D000920 ORTHO05D004854 7.0e-26 119.8 56 94.6
LjContig00092g0015566 Lotus japonicus HOM05D001828 ORTHO05D001745 9.2e-26 119.4 57 94.7
A05p22260 Brassica napus HOM05D000920 ORTHO05D004854 3.5e-25 117.5 57 91.2
A05p22620 Brassica napus HOM05D000920 ORTHO05D004854 2.3e-24 114.8 57 89.5
Mapoly4316s0001 Marchantia polymorpha HOM05D000920 ORTHO05D004854 6.6e-24 113.2 57 91.2
BcaNung06295 Brassica carinata HOM05D000920 ORTHO05D004854 3.3e-23 110.9 54 94.4
A05p22350 Brassica napus HOM05D000920 ORTHO05D004854 3.3e-23 110.9 57 87.7
Sopen00g002210 Solanum pennellii HOM05D000920 ORTHO05D004854 4.7e-22 107.1 55 83.6
A06p23770 Brassica napus HOM05D000920 ORTHO05D004854 6.2e-22 106.7 50 96.0
A06p26060 Brassica napus HOM05D000920 ORTHO05D004854 6.2e-22 106.7 50 96.0
unitig_8.g4074 Utricularia gibba HOM05D000920 ORTHO05D004854 8.0e-22 106.3 58 84.5
A06p24760 Brassica napus HOM05D000920 ORTHO05D004854 2.3e-21 104.8 50 92.0
A05p22590 Brassica napus HOM05D000920 ORTHO05D004854 3.1e-21 104.4 56 83.9
A09p31330 Brassica napus HOM05D000920 ORTHO05D004854 3.1e-21 104.4 56 85.7
A05p22480 Brassica napus HOM05D000920 ORTHO05D000626 6.8e-21 103.2 51 90.2
A06p24570 Brassica napus HOM05D000920 ORTHO05D004854 8.9e-21 102.8 49 91.8
HPP92_007078 Vanilla planifolia HOM05D000920 ORTHO05D004854 8.9e-21 102.8 50 88.0
BNapus_Darmor_BZH_scaffold_120p00040 Brassica napus HOM05D000920 ORTHO05D004854 1.5e-20 102.1 49 93.9
BNapus_Darmor_BZH_scaffold_85p00030 Brassica napus HOM05D000920 ORTHO05D004854 5.8e-20 100.1 48 91.7
A05p22400 Brassica napus HOM05D000920 ORTHO05D004854 7.5e-20 99.8 48 89.6
A09p31310 Brassica napus HOM05D000920 ORTHO05D004854 2.9e-19 97.8 73 65.8
A09p22260 Brassica napus HOM05D000920 ORTHO05D004854 3.7e-19 97.4 50 90.0
A05p22060 Brassica napus HOM05D000920 ORTHO05D004854 1.7e-16 88.6 57 73.7
Sopen00g002260 Solanum pennellii HOM05D000920 ORTHO05D004854 2.3e-16 88.2 42 92.9
Manes.18G141021 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.18G143501 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S001308 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S003270 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S005559 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S009810 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S011445 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S014715 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S015369 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S017659 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S019948 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S022652 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S022952 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S023252 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S024152 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S024916 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S025152 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S025316 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S025616 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S026116 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S026152 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S026552 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S026852 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S026916 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S027252 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S027816 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S029316 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S029452 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S029652 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S029716 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S029916 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S030316 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S030552 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S031416 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S032816 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S034716 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S035316 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S035616 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S035916 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S037416 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S037716 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S038216 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S039016 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S040516 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S041716 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S043416 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S044016 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S045316 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S046516 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S047916 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S049416 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S050716 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S051216 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S051716 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S053416 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S053916 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S055316 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S055716 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S056416 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Manes.S056816 Manihot esculenta HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Potri.008G224120 Populus trichocarpa HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Potri.008G224147 Populus trichocarpa HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
Potri.008G224174 Populus trichocarpa HOM05D000920 ORTHO05D004854 1.1e-15 85.9 41 97.6
A06p25000 Brassica napus HOM05D000920 ORTHO05D004854 1.5e-15 85.5 40 97.5
Manes.S028416 Manihot esculenta HOM05D000920 ORTHO05D004854 1.5e-15 85.5 40 97.5
CDE02G3011 Ceratophyllum demersum HOM05D001018 ORTHO05D004854 5.6e-15 83.6 39 97.4
Thhalv10028160m.g Eutrema salsugineum HOM05D000920 ORTHO05D004854 5.6e-15 83.6 39 97.4
Thhalv10028221m.g Eutrema salsugineum HOM05D000920 ORTHO05D004854 5.6e-15 83.6 39 97.4
Thhalv10028284m.g Eutrema salsugineum HOM05D000920 ORTHO05D004854 5.6e-15 83.6 39 97.4
Thhalv10028144m.g Eutrema salsugineum HOM05D000920 ORTHO05D004854 7.3e-15 83.2 40 92.5
Manes.S026416 Manihot esculenta HOM05D000920 ORTHO05D004854 9.5e-15 82.8 41 95.1
A06p25590 Brassica napus HOM05D000920 ORTHO05D000922 1.2e-14 82.4 51 78.4
unitig_146.g30252 Utricularia gibba HOM05D000920 ORTHO05D004854 1.6e-14 82.0 39 97.4
unitig_659.g33188 Utricularia gibba HOM05D008864 ORTHO05D004854 1.6e-14 82.0 39 97.4
Rhsim05G0123800 Rhododendron simsii HOM05D000920 ORTHO05D004854 3.6e-14 80.9 38 94.7
A06p23530 Brassica napus HOM05D000920 ORTHO05D004854 6.2e-14 80.1 36 94.4
Lj6g0027271 Lotus japonicus HOM05D000920 ORTHO05D004854 8.1e-14 79.7 38 97.4
LjContig00006g0000950 Lotus japonicus HOM05D000920 ORTHO05D004854 8.1e-14 79.7 38 97.4
LjContig00006g0017690 Lotus japonicus HOM05D000920 ORTHO05D004854 8.1e-14 79.7 38 97.4
LjContig00479g0009062 Lotus japonicus HOM05D000920 ORTHO05D004854 8.1e-14 79.7 38 97.4
A05p22570 Brassica napus HOM05D000920 ORTHO05D003704 1.1e-13 79.3 40 85.0
BNapus_Darmor_BZH_scaffold_107p00280 Brassica napus HOM05D000920 ORTHO05D004854 1.1e-13 79.3 37 97.3
BNapus_Darmor_BZH_scaffold_107p00380 Brassica napus HOM05D000920 ORTHO05D004854 1.1e-13 79.3 37 97.3
BNapus_Darmor_BZH_scaffold_107p00550 Brassica napus HOM05D000920 ORTHO05D004854 1.1e-13 79.3 37 91.9
Sopen00g001800 Solanum pennellii HOM05D000920 ORTHO05D004854 3.1e-13 77.8 38 92.1
SHI35536 Sapria himalayana HOM05D015261 ORTHO05D000626 4.0e-13 77.4 37 86.5
Sopen00g001770 Solanum pennellii HOM05D000920 ORTHO05D004854 4.0e-13 77.4 38 92.1
Oeu008745.1 Olea europaea HOM05D001319 ORTHO05D000922 5.2e-13 77.0 42 78.6
A05p22380 Brassica napus HOM05D000920 ORTHO05D010211 6.8e-13 76.6 57 68.4
PGSC0003DMG400001030 Solanum tuberosum HOM05D000920 ORTHO05D004854 1.2e-12 75.9 40 85.0
SHI35535 Sapria himalayana HOM05D015261 ORTHO05D001679 2.0e-12 75.1 37 83.8
SHI35538 Sapria himalayana HOM05D015261 ORTHO05D001679 2.0e-12 75.1 37 83.8
SHI39806 Sapria himalayana HOM05D015261 ORTHO05D001679 2.0e-12 75.1 37 83.8
SHI39841 Sapria himalayana HOM05D015261 ORTHO05D001679 2.0e-12 75.1 37 83.8
SHI41312 Sapria himalayana HOM05D015261 ORTHO05D004854 2.0e-12 75.1 37 83.8
SHI41730 Sapria himalayana HOM05D015261 ORTHO05D004854 2.0e-12 75.1 37 83.8
SHI42217 Sapria himalayana HOM05D015261 ORTHO05D004854 2.0e-12 75.1 37 83.8
unitig_579.g34797 Utricularia gibba HOM05D000920 ORTHO05D003704 2.0e-12 75.1 36 88.9
A06p24080 Brassica napus HOM05D000920 ORTHO05D000922 4.4e-12 73.9 35 88.6
A05p22440 Brassica napus HOM05D000920 ORTHO05D004854 7.1e-10 66.6 35 88.6
BcaB04g16896 Brassica carinata HOM05D000920 ORTHO05D004854 1.2e-09 65.9 43 74.4
Oeu061862.1 Olea europaea HOM05D000920 ORTHO05D004854 1.2e-09 65.9 32 87.5
EL10Ac8g19117 Beta vulgaris HOM05D000920 ORTHO05D004854 1.3e-08 62.4 38 78.9
BNapus_Darmor_BZH_scaffold_164p00020 Brassica napus HOM05D000920 ORTHO05D003704 2.3e-08 61.6 25 100.0
A06p24970 Brassica napus HOM05D000920 ORTHO05D004854 5.1e-08 60.5 30 90.0
BNapus_Darmor_BZH_scaffold_107p00210 Brassica napus HOM05D000920 ORTHO05D004854 1.1e-07 59.3 57 56.1
BcaC06g36787 Brassica carinata HOM05D000920 ORTHO05D003704 2.5e-07 58.2 29 86.2
A05p22310 Brassica napus HOM05D000920 ORTHO05D014976 2.5e-07 58.2 26 88.5
A06p24740 Brassica napus HOM05D008229 ORTHO05D032583 3.3e-07 57.8 24 95.8
A05p22300 Brassica napus HOM05D000920 ORTHO05D003704 1.2e-06 55.8 57 52.6
C02p52920 Brassica napus HOM05D000920 ORTHO05D004854 1.6e-06 55.5 32 78.1
A06p25860 Brassica napus HOM05D000920 ORTHO05D003704 2.1e-06 55.1 23 95.7
BcaC07g37369 Brassica carinata HOM05D000920 ORTHO05D003704 6.2e-06 53.5 57 54.4


User provided reference genes

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