Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc14g0003820 Simmondsia chinensis HOM05D046437 ORTHO05D388478 2.7e-236 821.6 415 100.0
Sc12g0000040 Simmondsia chinensis HOM05D046437 ORTHO05D387720 1.4e-30 138.3 288 45.5
Lj2g0016942 Lotus japonicus HOM05D000099 ORTHO05D000205 1.8e-19 101.3 58 81.0
Lj5g0026620 Lotus japonicus HOM05D000099 ORTHO05D000205 1.8e-19 101.3 58 81.0
Lj6g0027222 Lotus japonicus HOM05D000099 ORTHO05D000205 1.8e-19 101.3 58 81.0
LjContig00097g0009783 Lotus japonicus HOM05D000099 ORTHO05D000205 1.8e-19 101.3 58 81.0
LjContig00371g0011613 Lotus japonicus HOM05D000099 ORTHO05D000205 1.8e-19 101.3 58 81.0
CiPaw.05G155000 Carya illinoinensis HOM05D000099 ORTHO05D000205 7.0e-19 99.4 52 90.4
LjContig00372g0019103 Lotus japonicus HOM05D000099 ORTHO05D000205 9.2e-19 99.0 52 86.5
LjContig00006g0015344 Lotus japonicus HOM05D000099 ORTHO05D000205 2.7e-18 97.4 58 79.3
Glyma.U007102 Glycine max HOM05D000099 ORTHO05D000205 5.9e-18 96.3 58 77.6
arahy.Tifrunner.gnm1.ann1.GJE9M9 Arachis hypogaea HOM05D000099 ORTHO05D011703 1.3e-17 95.1 58 77.6
Lj5g0011557 Lotus japonicus HOM05D000099 ORTHO05D000205 1.3e-17 95.1 58 77.6
CiPaw.05G153600 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.05G154200 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.05G154300 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.05G154700 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.05G154800 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.05G155100 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.05G155300 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.05G155500 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.05G155700 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.05G156100 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G094300 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G094400 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G094500 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G094600 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G094700 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G094800 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G095000 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G095100 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G095200 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G095300 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G095400 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G095500 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G095600 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G095700 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G095900 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G096000 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G096100 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G096200 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G096300 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G096400 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G096500 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G096600 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G096700 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G096800 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G096900 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G097000 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G097100 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G097300 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G097400 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G097500 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G097600 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G097700 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G097900 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G098200 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G098300 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G098400 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G098500 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G098700 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G098900 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G099000 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G099100 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G099200 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G099300 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G099400 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G099500 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G099700 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G099900 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G100200 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G100300 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G100400 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G100500 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G100600 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G101000 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G101100 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G101200 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G101300 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G101400 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G101500 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G101600 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G101700 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G101800 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G101900 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G102000 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G102100 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G102200 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G102300 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G102400 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G102500 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G102600 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G102700 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G102800 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G102900 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G103000 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G103100 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G103200 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G103400 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G103700 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G104000 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G104100 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G104200 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G104300 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G104400 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G104800 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G104900 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G105000 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G105200 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G105400 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G105600 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G105800 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G106200 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G106300 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G106400 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
CiPaw.15G106500 Carya illinoinensis HOM05D000099 ORTHO05D000205 2.3e-17 94.4 48 91.7
Glyma.U006721 Glycine max HOM05D000099 ORTHO05D000205 2.3e-17 94.4 52 82.7
arahy.Tifrunner.gnm1.ann1.5SN4J9 Arachis hypogaea HOM05D000099 ORTHO05D011703 5.0e-17 93.2 52 82.7
arahy.Tifrunner.gnm1.ann1.LXEC1Y Arachis hypogaea HOM05D000099 ORTHO05D011703 5.0e-17 93.2 52 82.7
CiPaw.05G155800 Carya illinoinensis HOM05D000099 ORTHO05D000205 6.6e-17 92.8 48 89.6
Lj5g0008876 Lotus japonicus HOM05D000099 ORTHO05D000205 6.6e-17 92.8 58 77.6
arahy.Tifrunner.gnm1.ann1.64N8RC Arachis hypogaea HOM05D000099 ORTHO05D011703 8.6e-17 92.4 52 82.7
arahy.Tifrunner.gnm1.ann1.F5ST8G Arachis hypogaea HOM05D000099 ORTHO05D011703 8.6e-17 92.4 52 82.7
arahy.Tifrunner.gnm1.ann1.FLZ3NT Arachis hypogaea HOM05D000099 ORTHO05D011703 8.6e-17 92.4 52 82.7
CiPaw.15G105100 Carya illinoinensis HOM05D000099 ORTHO05D000205 8.6e-17 92.4 48 89.6
arahy.Tifrunner.gnm1.ann1.EZ705U Arachis hypogaea HOM05D009430 ORTHO05D013760 1.1e-16 92.0 51 82.4
arahy.Tifrunner.gnm1.ann1.PCN789 Arachis hypogaea HOM05D009430 ORTHO05D013760 1.1e-16 92.0 51 82.4
CiPaw.15G103800 Carya illinoinensis HOM05D000099 ORTHO05D000205 1.1e-16 92.0 47 91.5
CiPaw.15G105900 Carya illinoinensis HOM05D000099 ORTHO05D000205 1.1e-16 92.0 47 91.5
CiPaw.05G155600 Carya illinoinensis HOM05D000099 ORTHO05D000205 1.9e-16 91.3 48 89.6
arahy.Tifrunner.gnm1.ann1.BJB1QS Arachis hypogaea HOM05D000099 ORTHO05D011703 3.3e-16 90.5 52 80.8
arahy.Tifrunner.gnm1.ann1.I6BB44 Arachis hypogaea HOM05D000099 ORTHO05D011703 9.5e-16 89.0 51 80.4
arahy.Tifrunner.gnm1.ann1.3I18X0 Arachis hypogaea HOM05D000099 ORTHO05D011703 3.1e-14 84.0 46 84.8
arahy.Tifrunner.gnm1.ann1.6MVI2R Arachis hypogaea HOM05D000099 ORTHO05D011703 1.5e-13 81.6 52 75.0
arahy.Tifrunner.gnm1.ann1.N9TRXI Arachis hypogaea HOM05D009430 ORTHO05D011703 1.5e-13 81.6 46 82.6
arahy.Tifrunner.gnm1.ann1.RD4S3C Arachis hypogaea HOM05D009430 ORTHO05D013760 2.9e-12 77.4 44 81.8
arahy.Tifrunner.gnm1.ann1.K77FXM Arachis hypogaea HOM05D009430 ORTHO05D013760 8.3e-12 75.9 46 78.3
arahy.Tifrunner.gnm1.ann1.LV08UX Arachis hypogaea HOM05D009430 ORTHO05D013760 9.2e-11 72.4 45 77.8
CiPaw.15G097800 Carya illinoinensis HOM05D000099 ORTHO05D002047 1.7e-09 68.2 429 30.1
CiPaw.15G103500 Carya illinoinensis HOM05D000099 ORTHO05D000205 6.6e-09 66.2 423 30.0
CiPaw.15G098800 Carya illinoinensis HOM05D000099 ORTHO05D000205 5.6e-08 63.2 32 90.6


User provided reference genes

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