Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc14g0003330 Simmondsia chinensis HOM05D007167 ORTHO05D010128 8.3e-108 393.7 190 100.0
Sc02g0009550 Simmondsia chinensis HOM05D007167 ORTHO05D013628 9.0e-22 107.8 77 72.7
Sc14g0003700 Simmondsia chinensis HOM05D007167 ORTHO05D013628 9.0e-22 107.8 77 72.7
Sc14g0003760 Simmondsia chinensis HOM05D007167 ORTHO05D013628 9.0e-22 107.8 77 72.7
Sc14g0003870 Simmondsia chinensis HOM05D007167 ORTHO05D013628 9.0e-22 107.8 77 72.7
Sc14g0003940 Simmondsia chinensis HOM05D007167 ORTHO05D013628 9.0e-22 107.8 77 72.7
Sc14g0004160 Simmondsia chinensis HOM05D007167 ORTHO05D013628 9.0e-22 107.8 77 72.7
Sc14g0004250 Simmondsia chinensis HOM05D007167 ORTHO05D013628 9.0e-22 107.8 77 72.7
Sc14g0004270 Simmondsia chinensis HOM05D007167 ORTHO05D000205 9.0e-22 107.8 77 72.7
Sc14g0004320 Simmondsia chinensis HOM05D007167 ORTHO05D013628 9.0e-22 107.8 77 72.7
Sc18g0006310 Simmondsia chinensis HOM05D007167 ORTHO05D001745 9.0e-22 107.8 77 72.7
ScUNg0000250 Simmondsia chinensis HOM05D007167 ORTHO05D013628 9.0e-22 107.8 77 72.7
ScUNg0000780 Simmondsia chinensis HOM05D007167 ORTHO05D013628 9.0e-22 107.8 77 72.7
ScUNg0000790 Simmondsia chinensis HOM05D007167 ORTHO05D013628 9.0e-22 107.8 77 72.7
ScUNg0000910 Simmondsia chinensis HOM05D007167 ORTHO05D013628 9.0e-22 107.8 77 72.7
ScUNg0001250 Simmondsia chinensis HOM05D007167 ORTHO05D013628 9.0e-22 107.8 77 72.7
ScUNg0001330 Simmondsia chinensis HOM05D007167 ORTHO05D013628 9.0e-22 107.8 77 72.7
arahy.Tifrunner.gnm1.ann1.51AWIK Arachis hypogaea HOM05D008177 ORTHO05D010128 4.1e-14 82.4 48 79.2
Sc21g0003540 Simmondsia chinensis HOM05D007167 ORTHO05D000922 5.3e-14 82.0 75 58.7
arahy.Tifrunner.gnm1.ann1.LHTL6D Arachis hypogaea HOM05D008177 ORTHO05D010128 6.5e-12 75.1 45 77.8
Sc21g0003530 Simmondsia chinensis HOM05D008177 ORTHO05D010128 6.5e-12 75.1 76 52.6
SHI06373 Sapria himalayana HOM05D000024 ORTHO05D000007 1.6e-10 70.5 48 64.6
Sc14g0003600 Simmondsia chinensis HOM05D001828 ORTHO05D001745 1.6e-10 70.5 35 88.6
FAN25G1010 Fragaria x ananassa HOM05D008177 ORTHO05D010128 4.7e-10 68.9 75 50.7
Manes.02G222401 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.18G143702 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S000327 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S002943 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S003924 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S006867 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S009156 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S010791 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S013407 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S016678 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S019294 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S020929 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S021910 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S022816 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S023016 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S023552 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S023616 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S024116 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S024216 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S024616 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S025452 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S025552 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S025816 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S025852 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S025952 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S027616 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S028252 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S028352 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S030516 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S032116 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S034316 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S035116 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S036116 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S036716 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S037016 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S038716 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S038816 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S039816 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S040016 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S040816 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S041416 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S042616 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S042916 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S043616 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S044516 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S045516 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S046816 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S047316 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S051416 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S052816 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
Manes.S054316 Manihot esculenta HOM05D008177 ORTHO05D010128 1.0e-09 67.8 35 85.7
CBR_g59558 Chara braunii HOM05D007864 ORTHO05D010128 3.0e-09 66.2 48 66.7
CiPaw.05G156400 Carya illinoinensis HOM05D008177 ORTHO05D010128 3.9e-09 65.9 35 82.9
PRCOL_00001071 Prasinoderma coloniale HOM05D008177 ORTHO05D010128 4.4e-08 62.4 48 62.5
PRCOL_00001096 Prasinoderma coloniale HOM05D008177 ORTHO05D010128 4.4e-08 62.4 48 62.5
PRCOL_00001112 Prasinoderma coloniale HOM05D008177 ORTHO05D010128 4.4e-08 62.4 48 62.5
PRCOL_00001183 Prasinoderma coloniale HOM05D008177 ORTHO05D010128 4.4e-08 62.4 48 62.5
PRCOL_00001198 Prasinoderma coloniale HOM05D008177 ORTHO05D010128 4.4e-08 62.4 48 62.5
Thhalv10028304m.g Eutrema salsugineum HOM05D001828 ORTHO05D001745 7.4e-08 61.6 58 51.7
Psat3g188680 Pisum sativum HOM05D003608 ORTHO05D010128 2.8e-07 59.7 31 83.9
BcaC06g36786 Brassica carinata HOM05D001828 ORTHO05D010128 3.7e-07 59.3 35 77.1
unitig_135.g35480 Utricularia gibba HOM05D008177 ORTHO05D010128 3.7e-07 59.3 35 82.9
arahy.Tifrunner.gnm1.ann1.IE4QSS Arachis hypogaea HOM05D008177 ORTHO05D010128 4.8e-07 58.9 32 81.2
ScUNg0001450 Simmondsia chinensis HOM05D007167 ORTHO05D001745 6.3e-07 58.5 61 50.8
CBR_g56704 Chara braunii HOM05D008177 ORTHO05D010128 3.1e-06 56.2 42 64.3
Sopen00g001870 Solanum pennellii HOM05D003608 ORTHO05D000917 7.0e-06 55.1 50 54.0


User provided reference genes

Program Settings