Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc14g0003260 Simmondsia chinensis HOM05D004909 ORTHO05D009625 4.7e-188 661.0 324 100.0
Actinidia34900 Actinidia chinensis HOM05D004909 ORTHO05D009316 2.5e-149 532.3 318 83.6
Sed0005050 Sechium edule HOM05D004909 ORTHO05D009316 1.2e-98 364.0 321 57.6
Oeu057349.1 Olea europaea HOM05D013539 ORTHO05D014921 2.2e-76 290.0 288 55.6
PGR044G1103 Punica granatum HOM05D004909 ORTHO05D009625 9.5e-72 274.6 326 44.2
SEGI_22240 Sequoiadendron giganteum HOM05D004909 ORTHO05D009316 5.8e-69 265.4 263 50.2
RcHm_v2.0_Chr6g0256711 Rosa chinensis HOM05D004909 ORTHO05D009625 3.7e-68 262.7 326 44.5
DCAR_032461 Daucus carota HOM05D004909 ORTHO05D009625 1.9e-67 260.4 328 44.8
Sc11g0004480 Simmondsia chinensis HOM05D004909 ORTHO05D009625 4.1e-67 259.2 125 99.2
VMungo1067G0003 Vigna mungo HOM05D004909 ORTHO05D009625 2.1e-66 256.9 327 43.4
Cc00_g11440 Coffea canephora HOM05D004909 ORTHO05D009625 1.6e-63 247.3 159 74.2
EL10Ac7g16727 Beta vulgaris HOM05D004909 ORTHO05D009625 6.4e-60 235.3 330 39.1
PGR004G1782 Punica granatum HOM05D004909 ORTHO05D009625 6.4e-60 235.3 243 49.4
EL10Ac1g02202 Beta vulgaris HOM05D004909 ORTHO05D009625 2.8e-55 219.9 199 55.8
AUR62044036 Chenopodium quinoa HOM05D004909 ORTHO05D009625 2.4e-54 216.9 220 53.2
PSO063G2824 Papaver somniferum HOM05D004909 ORTHO05D009625 1.2e-53 214.5 324 37.0
AUR62042351 Chenopodium quinoa HOM05D004909 ORTHO05D009316 1.4e-51 207.6 211 52.6
CAN.G490.20 Capsicum annuum HOM05D004909 ORTHO05D009625 8.7e-49 198.4 209 54.5
Cc00_g01880 Coffea canephora HOM05D004909 ORTHO05D009625 4.0e-46 189.5 127 74.8
EL10Ac1g01430 Beta vulgaris HOM05D004909 ORTHO05D009625 7.9e-42 175.3 206 45.1
Nitab4.5_0000081g0150 Nicotiana tabacum HOM05D004909 ORTHO05D009625 3.4e-37 159.8 255 37.6
AUR62010529 Chenopodium quinoa HOM05D004909 ORTHO05D005619 1.1e-35 154.8 122 58.2
Aqoxy2G02243 Aquilegia oxysepala HOM05D004909 ORTHO05D009625 1.2e-34 151.4 189 47.6
Aqoxy3G01128 Aquilegia oxysepala HOM05D004909 ORTHO05D009625 1.2e-34 151.4 189 47.6
Nitab4.5_0000014g0460 Nicotiana tabacum HOM05D004909 ORTHO05D009625 1.9e-32 144.1 189 41.3
Hma1.2p1_1313F.1_g274950 Hydrangea macrophylla HOM05D004909 ORTHO05D009625 1.1e-30 138.3 84 79.8
Solyc05g045720.1 Solanum lycopersicum HOM05D004909 ORTHO05D009625 2.1e-26 124.0 141 43.3
Oeu050987.1 Olea europaea HOM05D004909 ORTHO05D009625 1.5e-24 117.9 221 34.4
Hma1.2p1_0003F.1_g003590 Hydrangea macrophylla HOM05D004909 ORTHO05D009316 1.3e-20 104.8 57 86.0
CsaV3_UNG207890 Cucumis sativus L. HOM05D004909 ORTHO05D009625 6.5e-20 102.4 322 30.1
Aqoxy2G02242 Aquilegia oxysepala HOM05D004909 ORTHO05D009625 1.1e-14 85.1 81 49.4
Aqoxy3G01129 Aquilegia oxysepala HOM05D004909 ORTHO05D009625 1.1e-14 85.1 81 49.4
SHI38062 Sapria himalayana HOM05D004909 ORTHO05D009625 4.1e-14 83.2 124 35.5
SGA_v2.0_scaffold119G32792 Striga asiatica HOM05D004909 ORTHO05D009625 2.9e-12 77.0 82 45.1
Lsat_1_v5_gn_5_24721 Lactuca sativa HOM05D001793 ORTHO05D001938 5.0e-12 76.3 49 69.4
SHI46715 Sapria himalayana HOM05D004909 ORTHO05D009625 1.9e-11 74.3 124 32.3
Nitab4.5_0005140g0040 Nicotiana tabacum HOM05D004909 ORTHO05D009625 2.7e-10 70.5 136 32.4
SHI29963 Sapria himalayana HOM05D009967 ORTHO05D009625 3.6e-10 70.1 69 50.7
SHI41760 Sapria himalayana HOM05D009967 ORTHO05D009625 3.6e-10 70.1 75 50.7
SHI49388 Sapria himalayana HOM05D009967 ORTHO05D009625 9.7e-08 62.0 171 26.3
SGA_v2.0_scaffold400G50947 Striga asiatica HOM05D004909 ORTHO05D009625 1.7e-07 61.2 62 54.8


User provided reference genes

Program Settings