Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc14g0002760 Simmondsia chinensis HOM05D006483 ORTHO05D007837 1.2e-235 819.3 389 100.0
GSVIVG01036968001 Vitis vinifera HOM05D006483 ORTHO05D007837 7.4e-180 634.0 345 84.1
Cpa.g.sc20.69 Carica papaya HOM05D006483 ORTHO05D007837 2.2e-179 632.5 350 82.3
Sabra16G0180000 Salix brachista HOM05D006483 ORTHO05D007837 8.2e-179 630.6 375 80.0
Glyma.15G061600 Glycine max HOM05D006483 ORTHO05D007837 4.1e-178 628.2 389 76.3
Duzib132G0719 Durio zibethinus HOM05D006483 ORTHO05D007837 5.3e-178 627.9 345 84.6
Thecc.02G034600 Theobroma cacao HOM05D006483 ORTHO05D007837 3.5e-177 625.2 350 83.1
CiPaw.06G161800 Carya illinoinensis HOM05D006483 ORTHO05D007837 4.5e-177 624.8 373 78.6
Potri.001G287700 Populus trichocarpa HOM05D006483 ORTHO05D007837 2.9e-176 622.1 393 76.6
Eucgr.I02515 Eucalyptus grandis HOM05D006483 ORTHO05D007837 3.8e-176 621.7 392 74.7
Nn6g34537 Nelumbo nucifera HOM05D006483 ORTHO05D007837 3.8e-176 621.7 319 88.1
Manes.07G049300 Manihot esculenta HOM05D006483 ORTHO05D007837 5.0e-176 621.3 370 78.9
Phvul.006G198100 Phaseolus vulgaris HOM05D006483 ORTHO05D007837 5.0e-176 621.3 341 82.7
VMungo0540G0518 Vigna mungo HOM05D006483 ORTHO05D007837 1.4e-175 619.8 390 75.9
EL10Ac9g22152 Beta vulgaris HOM05D006483 ORTHO05D007837 2.5e-175 619.0 333 84.7
Gohir.A12G031000 Gossypium hirsutum HOM05D006483 ORTHO05D007837 3.2e-175 618.6 368 79.3
Gohir.D12G041300 Gossypium hirsutum HOM05D006483 ORTHO05D007837 3.2e-175 618.6 345 82.9
QL11p027690 Quercus lobata HOM05D006483 ORTHO05D007837 4.2e-175 618.2 352 81.0
Gorai.008G043200 Gossypium raimondii HOM05D006483 ORTHO05D007837 7.2e-175 617.5 375 78.1
Lj1g0015418 Lotus japonicus HOM05D006483 ORTHO05D007837 1.2e-174 616.7 381 76.4
TWI59G1265 Tripterygium wilfordii HOM05D006483 ORTHO05D007837 2.1e-174 615.9 389 75.3
Atru.chr5.2145 Acer truncatum HOM05D006483 ORTHO05D007837 2.7e-174 615.5 404 74.8
Ciclev10030436m.g Citrus clementina HOM05D006483 ORTHO05D007837 2.7e-174 615.5 362 78.5
arahy.Tifrunner.gnm1.ann1.SKNB9F Arachis hypogaea HOM05D006483 ORTHO05D007837 3.6e-174 615.1 408 72.8
Dinv09500 Davidia involucrata HOM05D006483 ORTHO05D007837 3.6e-174 615.1 324 85.8
Medtr2g010480 Medicago truncatula HOM05D006483 ORTHO05D007837 8.0e-174 614.0 330 84.2
Psat1g212200 Pisum sativum HOM05D006483 ORTHO05D007837 1.4e-173 613.2 321 85.4
CiPaw.05G024900 Carya illinoinensis HOM05D006483 ORTHO05D007837 1.8e-173 612.8 321 85.4
PGR142G2962 Punica granatum HOM05D006483 ORTHO05D007837 1.8e-173 612.8 385 74.8
Prupe.8G157100 Prunus persica HOM05D006483 ORTHO05D007837 8.8e-173 610.5 358 79.9
Ca_00195_v3 Cicer arietinum L. HOM05D006483 ORTHO05D007837 1.1e-172 610.1 378 75.4
FAN24G1160 Fragaria x ananassa HOM05D006483 ORTHO05D007837 3.3e-172 608.6 383 76.0
Rhsim11G0146300 Rhododendron simsii HOM05D006483 ORTHO05D007837 4.4e-172 608.2 360 80.0
Lalb_Chr15g0090221 Lupinus albus HOM05D006483 ORTHO05D007837 9.7e-172 607.1 321 83.8
vmacro01915 Vaccinium macrocarpon HOM05D006483 ORTHO05D007837 1.3e-171 606.7 376 76.9
Duzib248G0339 Durio zibethinus HOM05D006483 ORTHO05D007837 1.7e-171 606.3 319 85.9
Lsat_1_v5_gn_5_110541 Lactuca sativa HOM05D006483 ORTHO05D007837 2.2e-171 605.9 319 85.6
CANSAT25G2975 Cannabis sativa HOM05D006483 ORTHO05D007837 2.8e-171 605.5 358 78.2
MD10G1115000 Malus domestica HOM05D006483 ORTHO05D007837 3.7e-171 605.1 389 75.3
Cfa004758 Carpinus fangiana HOM05D006483 ORTHO05D007837 8.2e-171 604.0 385 75.1
Cc02_g20380 Coffea canephora HOM05D006483 ORTHO05D007837 8.2e-171 604.0 354 78.2
FvH4_2g02550 Fragaria vesca HOM05D006483 ORTHO05D007837 1.1e-170 603.6 383 75.5
Carub.0003s2843 Capsella rubella HOM05D006483 ORTHO05D007837 1.4e-170 603.2 312 86.5
TAR376G0523 Trochodendron aralioides HOM05D006483 ORTHO05D007837 1.4e-170 603.2 390 73.3
FAN20G1555 Fragaria x ananassa HOM05D006483 ORTHO05D007837 1.8e-170 602.8 385 75.1
RcHm_v2.0_Chr6g0246361 Rosa chinensis HOM05D006483 ORTHO05D007837 2.4e-170 602.4 379 76.0
CsaV3_4G014600 Cucumis sativus L. HOM05D006483 ORTHO05D007837 7.0e-170 600.9 396 74.2
COL.COLO4_17833 Corchorus olitorius HOM05D006483 ORTHO05D007837 1.6e-169 599.7 341 81.5
FAN15G2441 Fragaria x ananassa HOM05D006483 ORTHO05D007837 2.0e-169 599.4 324 83.6
HanXRQChr10g0297661 Helianthus annuus HOM05D006483 ORTHO05D007837 3.5e-169 598.6 322 83.2
Aa31LG8G12670 Aethionema arabicum HOM05D006483 ORTHO05D007837 5.9e-169 597.8 319 84.0
ClCG10G009710 Citrullus lanatus HOM05D006483 ORTHO05D007837 5.9e-169 597.8 396 72.7
ECA234G3552 Erigeron canadensis HOM05D006483 ORTHO05D007837 5.9e-169 597.8 316 84.2
Sed0015964 Sechium edule HOM05D006483 ORTHO05D007837 1.3e-168 596.7 326 83.1
CAN.G475.27 Capsicum annuum HOM05D006483 ORTHO05D007837 1.7e-168 596.3 346 77.7
PSO541G5548 Papaver somniferum HOM05D006483 ORTHO05D007837 1.7e-168 596.3 316 84.5
Aqoxy6G02925 Aquilegia oxysepala HOM05D006483 ORTHO05D007837 6.5e-168 594.3 373 75.6
CARHR105280 Cardamine hirsuta HOM05D006483 ORTHO05D007837 8.5e-168 594.0 312 85.3
Solyc11g044310.2 Solanum lycopersicum HOM05D006483 ORTHO05D007837 8.5e-168 594.0 366 75.1
PSO675G7999 Papaver somniferum HOM05D006483 ORTHO05D007837 1.1e-167 593.6 378 75.4
Sopen11g019810 Solanum pennellii HOM05D006483 ORTHO05D007837 2.5e-167 592.4 366 74.9
BcaC01g03099 Brassica carinata HOM05D006483 ORTHO05D007837 3.2e-167 592.0 323 82.7
BolC3t17891H Brassica oleracea HOM05D006483 ORTHO05D007837 3.2e-167 592.0 323 82.7
A03p45170 Brassica napus HOM05D006483 ORTHO05D007837 4.2e-167 591.7 362 76.8
Thhalv10022723m.g Eutrema salsugineum HOM05D006483 ORTHO05D007837 4.2e-167 591.7 312 84.0
BraA03t13652Z Brassica rapa HOM05D006483 ORTHO05D007837 1.2e-166 590.1 312 85.3
FAN27G0654 Fragaria x ananassa HOM05D006483 ORTHO05D007837 1.2e-166 590.1 410 70.7
THA.LOC104819515 Tarenaya hassleriana HOM05D006483 ORTHO05D007837 1.2e-166 590.1 368 74.7
Sp3g27660 Schrenkiella parvula HOM05D006483 ORTHO05D007837 2.1e-166 589.3 312 84.3
AL3G45940 Arabidopsis lyrata HOM05D006483 ORTHO05D007837 4.7e-166 588.2 312 84.6
Peaxi162Scf00152g00613 Petunia axillaris HOM05D006483 ORTHO05D007837 1.4e-165 586.6 347 78.1
BcaB08g34553 Brassica carinata HOM05D006483 ORTHO05D007837 2.3e-165 585.9 314 84.7
Migut.B00501 Erythranthe guttata HOM05D006483 ORTHO05D007837 5.2e-165 584.7 316 82.9
Lj5C223T22 Lonicera japonica HOM05D006483 ORTHO05D007837 6.8e-165 584.3 343 81.3
AT2G14260 Arabidopsis thaliana HOM05D006483 ORTHO05D007837 1.5e-164 583.2 313 84.3
CSS0046506 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 9.7e-164 580.5 348 77.3
SalBow6G1047 Salvia bowleyana HOM05D006483 ORTHO05D007837 1.7e-163 579.7 335 79.4
ATR0739G015 Amborella trichopoda HOM05D006483 ORTHO05D007837 3.7e-163 578.6 321 81.3
C03p56040 Brassica napus HOM05D006483 ORTHO05D007837 1.4e-162 576.6 352 75.9
DCAR_029840 Daucus carota HOM05D006483 ORTHO05D007837 1.4e-162 576.6 328 80.5
SGA_v2.0_scaffold342G49421 Striga asiatica HOM05D006483 ORTHO05D007837 7.2e-159 564.3 414 66.9
unitig_21.g20708 Utricularia gibba HOM05D006483 ORTHO05D007837 4.0e-157 558.5 315 78.7
arahy.Tifrunner.gnm1.ann1.AKE21I Arachis hypogaea HOM05D006483 ORTHO05D007837 1.3e-155 553.5 408 67.2
TAR628G0755 Trochodendron aralioides HOM05D006483 ORTHO05D007837 2.2e-155 552.7 293 84.6
CSS0033600 Camellia sinensis var. sinensis HOM05D006483 ORTHO05D007837 3.5e-153 545.4 348 74.4
HPP92_006303 Vanilla planifolia HOM05D006483 ORTHO05D007837 7.7e-153 544.3 335 74.9
MELO3C018038.2 Cucumis melo HOM05D006483 ORTHO05D007837 4.2e-151 538.5 358 72.9
MSTRG.16655 Avicennia marina HOM05D006483 ORTHO05D007837 1.2e-150 537.0 293 82.6
AUR62027055 Chenopodium quinoa HOM05D006483 ORTHO05D007837 3.0e-149 532.3 333 75.4
CDE02G1970 Ceratophyllum demersum HOM05D006483 ORTHO05D007837 2.4e-146 522.7 325 74.8
Zm00001eb292750 Zea mays HOM05D006483 ORTHO05D007837 1.0e-144 517.3 284 81.0
SMO145G0068 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 3.3e-143 512.3 310 72.9
Mapoly0001s0344 Marchantia polymorpha HOM05D006483 ORTHO05D007837 4.7e-142 508.4 316 72.2
AagrBONN_evm.TU.Sc2ySwM_344.4362 Anthoceros agrestis HOM05D006483 ORTHO05D007837 1.2e-140 503.8 315 70.2
Pp3c4_27270 Physcomitrium patens HOM05D006483 ORTHO05D007837 1.9e-138 496.5 310 70.0
Haze_10356 Corylus avellana HOM05D006483 ORTHO05D007837 1.4e-133 480.3 620 46.0
CBR_g8564 Chara braunii HOM05D006483 ORTHO05D007837 5.6e-127 458.4 313 65.8
Os05g0513900 Oryza sativa ssp. japonica HOM05D006483 ORTHO05D007837 1.3e-120 437.2 243 80.2
Ah.01g024350 Amaranthus hybridus HOM05D006483 ORTHO05D007837 1.9e-111 406.8 276 71.4
AUR62030898 Chenopodium quinoa HOM05D006483 ORTHO05D007837 2.7e-105 386.3 285 65.3
Nitab4.5_0007517g0010 Nicotiana tabacum HOM05D006483 ORTHO05D007837 4.6e-105 385.6 246 72.4
Actinidia00335 Actinidia chinensis HOM05D006483 ORTHO05D007837 3.0e-96 356.3 225 74.7
Mapoly0142s0028 Marchantia polymorpha HOM05D006483 ORTHO05D007837 3.4e-92 342.8 350 45.7
AagrBONN_evm.TU.Sc2ySwM_344.1401 Anthoceros agrestis HOM05D006483 ORTHO05D007837 7.6e-84 315.1 351 43.6
SMO364G0301 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 1.6e-81 307.4 317 45.4
SMO353G0285 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 6.1e-81 305.4 311 46.0
MBI16_g27214_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 4.1e-69 266.2 159 78.0
MBI16_g41225_MAGBIO Magnolia biondii HOM05D006483 ORTHO05D007837 5.0e-59 232.6 175 64.6
Zm00001eb142680 Zea mays HOM05D006483 ORTHO05D007837 1.2e-57 228.0 186 58.6
SEGI_12853 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 2.3e-56 223.8 126 77.0
PRCOL_00002897 Prasinoderma coloniale HOM05D006483 ORTHO05D007837 2.6e-55 220.3 334 38.6
EL10Ac8g19599 Beta vulgaris HOM05D006483 ORTHO05D007837 6.5e-51 205.7 134 73.9
Cre08.g375600 Chlamydomonas reinhardtii HOM05D006483 ORTHO05D007837 3.0e-48 196.8 196 46.9
MD05G1112500 Malus domestica HOM05D006483 ORTHO05D007837 1.5e-47 194.5 204 51.5
Oeu007495.1 Olea europaea HOM05D006483 ORTHO05D007837 3.0e-32 143.7 86 74.4
MD05G1112400 Malus domestica HOM05D006483 ORTHO05D007837 1.3e-22 111.7 65 72.3
SEGI_05070 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 7.5e-15 85.9 84 47.6
TPR.G27616 Trifolium pratense HOM05D006483 ORTHO05D007837 6.0e-12 76.3 38 78.9
arahy.Tifrunner.gnm1.ann1.W5BQ9H Arachis hypogaea HOM05D006483 ORTHO05D000252 7.8e-12 75.9 62 58.1
SEGI_04316 Sequoiadendron giganteum HOM05D006483 ORTHO05D007837 1.8e-08 64.7 49 63.3
ClCG01G022790 Citrullus lanatus HOM05D000363 ORTHO05D000236 1.3e-06 58.5 100 33.0
Zm00001eb049690 Zea mays HOM05D003600 ORTHO05D004129 2.2e-06 57.8 35 65.7
HPP92_001752 Vanilla planifolia HOM05D000363 ORTHO05D000236 8.4e-06 55.8 121 30.6


User provided reference genes

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