Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc14g0002620 Simmondsia chinensis HOM05D009209 ORTHO05D011705 3.2e-124 448.4 218 100.0
Sc03g0004450 Simmondsia chinensis HOM05D009209 ORTHO05D011705 6.0e-62 241.5 127 91.3
Sc17g0002300 Simmondsia chinensis HOM05D009209 ORTHO05D011705 3.5e-46 189.1 145 58.6
Sc17g0002350 Simmondsia chinensis HOM05D009209 ORTHO05D011705 4.6e-46 188.7 145 58.6
Sc15g0000880 Simmondsia chinensis HOM05D009209 ORTHO05D011705 1.2e-38 164.1 111 64.0
Sc03g0004550 Simmondsia chinensis HOM05D009209 ORTHO05D011705 1.3e-37 160.6 130 57.7
Sc03g0004030 Simmondsia chinensis HOM05D009209 ORTHO05D011705 3.4e-33 146.0 168 44.6
Sc03g0004050 Simmondsia chinensis HOM05D009209 ORTHO05D011705 3.4e-33 146.0 168 44.6
Sc21g0004040 Simmondsia chinensis HOM05D009209 ORTHO05D011705 1.1e-31 141.0 79 73.4
Sc22g0001820 Simmondsia chinensis HOM05D009348 ORTHO05D010856 3.2e-31 139.4 204 38.2
Sc01g0007590 Simmondsia chinensis HOM05D009209 ORTHO05D011705 1.5e-28 130.6 79 72.2
Sc01g0004870 Simmondsia chinensis HOM05D009209 ORTHO05D009629 9.7e-28 127.9 67 89.6
Sc09g0002060 Simmondsia chinensis HOM05D009348 ORTHO05D010856 7.2e-23 111.7 238 35.3
Sc24g0004230 Simmondsia chinensis HOM05D009348 ORTHO05D010856 9.4e-23 111.3 80 70.0
Sc15g0001330 Simmondsia chinensis HOM05D009209 ORTHO05D011705 1.0e-21 107.8 61 72.1
Sc03g0005750 Simmondsia chinensis HOM05D009348 ORTHO05D011705 3.9e-21 105.9 80 63.8
Sc02g0003510 Simmondsia chinensis HOM05D009348 ORTHO05D010856 9.7e-20 101.3 237 29.5
vmacro00634 Vaccinium macrocarpon HOM05D000516 ORTHO05D000409 6.3e-19 98.6 221 27.1
Sc02g0007500 Simmondsia chinensis HOM05D009209 ORTHO05D011705 4.5e-17 92.4 105 41.0
Sc21g0001740 Simmondsia chinensis HOM05D011136 ORTHO05D010856 1.7e-16 90.5 234 26.9
Sc10g0002300 Simmondsia chinensis HOM05D009348 ORTHO05D010856 3.8e-16 89.4 104 50.0
vmacro21928 Vaccinium macrocarpon HOM05D000086 ORTHO05D000431 1.2e-14 84.3 218 29.4
Actinidia12169 Actinidia chinensis HOM05D012898 ORTHO05D009356 6.1e-14 82.0 229 24.9
vmacro21908 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 8.0e-14 81.6 215 30.2
Sc18g0002450 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.3e-13 80.1 217 25.8
Sc15g0000710 Simmondsia chinensis HOM05D009209 ORTHO05D011705 6.7e-13 78.6 190 27.9
CSS0024781 Camellia sinensis var. sinensis HOM05D011882 ORTHO05D011057 4.4e-12 75.9 218 28.4
Sc06g0002140 Simmondsia chinensis HOM05D009348 ORTHO05D010856 2.8e-11 73.2 164 25.6
Sc14g0002520 Simmondsia chinensis HOM05D009209 ORTHO05D011705 8.2e-11 71.6 42 69.0
Actinidia04023 Actinidia chinensis HOM05D012898 ORTHO05D011057 2.4e-10 70.1 80 45.0
COL.COLO4_32924 Corchorus olitorius HOM05D011882 ORTHO05D015081 7.0e-10 68.6 226 24.3
Potri.017G044300 Populus trichocarpa HOM05D002777 ORTHO05D001516 9.1e-10 68.2 228 23.7
LjContig00583g0009142 Lotus japonicus HOM05D008220 ORTHO05D010358 2.0e-09 67.0 235 24.3
Sc12g0005710 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.0e-09 67.0 243 23.0
Sc16g0003440 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.7e-09 66.6 215 24.2
Ah.11g040120 Amaranthus hybridus HOM05D008762 ORTHO05D011252 3.5e-09 66.2 80 38.8
Sc26g0001380 Simmondsia chinensis HOM05D006933 ORTHO05D009629 5.9e-09 65.5 230 22.2
Rhsim11G0140400 Rhododendron simsii HOM05D000026 ORTHO05D009356 7.7e-09 65.1 93 35.5
Sc06g0004220 Simmondsia chinensis HOM05D006933 ORTHO05D009629 7.7e-09 65.1 235 23.4
RhsimUnG0239600 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.0e-08 64.7 93 35.5
Rhsim05G0075400 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.3e-08 64.3 93 32.3
Rhsim13G0125400 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.3e-08 64.3 93 32.3
Ah.02g118210 Amaranthus hybridus HOM05D008762 ORTHO05D011252 2.2e-08 63.5 258 24.0
vmacro09252 Vaccinium macrocarpon HOM05D008219 ORTHO05D000487 2.9e-08 63.2 202 25.7
Ah.15g100500 Amaranthus hybridus HOM05D008762 ORTHO05D011252 3.8e-08 62.8 80 37.5
Sc16g0005360 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.8e-08 62.8 81 39.5
Sc11g0007070 Simmondsia chinensis HOM05D009209 ORTHO05D011705 5.0e-08 62.4 42 57.1
vmacro11531 Vaccinium macrocarpon HOM05D010265 ORTHO05D009356 5.0e-08 62.4 79 38.0
Lj2g0017871 Lotus japonicus HOM05D008220 ORTHO05D010358 6.5e-08 62.0 220 23.6
Ah.16g108500 Amaranthus hybridus HOM05D008762 ORTHO05D011252 8.5e-08 61.6 80 41.2
Sc23g0004620 Simmondsia chinensis HOM05D006933 ORTHO05D009629 8.5e-08 61.6 68 44.1
EL10Ac8g19650 Beta vulgaris HOM05D000992 ORTHO05D006704 1.1e-07 61.2 125 30.4
Rhsim07G0052100 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.1e-07 61.2 93 33.3
Sc25g0003910 Simmondsia chinensis HOM05D006933 ORTHO05D009629 1.5e-07 60.8 66 42.4
RhsimUnG0101100 Rhododendron simsii HOM05D008219 ORTHO05D009356 1.9e-07 60.5 156 25.0
Sc15g0002150 Simmondsia chinensis HOM05D009209 ORTHO05D011057 1.9e-07 60.5 163 30.1
Sc15g0003580 Simmondsia chinensis HOM05D009209 ORTHO05D011705 1.9e-07 60.5 30 80.0
vmacro06592 Vaccinium macrocarpon HOM05D000211 ORTHO05D002285 1.9e-07 60.5 174 27.6
Rhsim04G0141400 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.5e-07 60.1 155 28.4
RhsimUnG0200600 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.5e-07 60.1 93 30.1
Ah.12g063050 Amaranthus hybridus HOM05D000030 ORTHO05D000009 3.2e-07 59.7 83 37.3
Sc22g0002690 Simmondsia chinensis HOM05D000043 ORTHO05D030613 3.2e-07 59.7 94 37.2
Sc23g0004070 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.2e-07 59.7 81 38.3
vmacro12740 Vaccinium macrocarpon HOM05D000625 ORTHO05D000467 3.2e-07 59.7 109 34.9
Ah.08g219520 Amaranthus hybridus HOM05D008762 ORTHO05D011252 4.2e-07 59.3 79 40.5
Lj5g0015440 Lotus japonicus HOM05D008220 ORTHO05D010358 4.2e-07 59.3 235 22.6
Rhsim04G0090900 Rhododendron simsii HOM05D008219 ORTHO05D009356 4.2e-07 59.3 93 33.3
DCAR_005094 Daucus carota HOM05D012331 ORTHO05D004468 5.5e-07 58.9 230 23.5
Lj5g0003699 Lotus japonicus HOM05D008220 ORTHO05D010358 5.5e-07 58.9 225 23.6
Lj6g0019563 Lotus japonicus HOM05D008220 ORTHO05D010358 7.2e-07 58.5 229 23.6
Sc18g0000360 Simmondsia chinensis HOM05D009348 ORTHO05D030613 7.2e-07 58.5 82 41.5
COL.COLO4_36343 Corchorus olitorius HOM05D009258 ORTHO05D009583 9.4e-07 58.2 118 28.8
vmacro00512 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 9.4e-07 58.2 85 34.1
vmacro09750 Vaccinium macrocarpon HOM05D005228 ORTHO05D006208 1.2e-06 57.8 219 23.3
vmacro22723 Vaccinium macrocarpon HOM05D005228 ORTHO05D006208 1.2e-06 57.8 219 23.3
Lj4g0013144 Lotus japonicus HOM05D008220 ORTHO05D010358 1.6e-06 57.4 243 22.6
EL10Ac6g15678 Beta vulgaris HOM05D008976 ORTHO05D011121 2.1e-06 57.0 105 29.5
Lj2g0000568 Lotus japonicus HOM05D002777 ORTHO05D001516 2.1e-06 57.0 273 24.9
Phvul.010G066000 Phaseolus vulgaris HOM05D002777 ORTHO05D001516 2.1e-06 57.0 220 24.1
Sc02g0004050 Simmondsia chinensis HOM05D006933 ORTHO05D009629 2.1e-06 57.0 77 35.1
Lj4g0014288 Lotus japonicus HOM05D008220 ORTHO05D010358 2.7e-06 56.6 235 20.4
Medtr2g060030 Medicago truncatula HOM05D008558 ORTHO05D011658 2.7e-06 56.6 248 21.4
Rhsim02G0045800 Rhododendron simsii HOM05D008219 ORTHO05D009356 3.6e-06 56.2 93 29.0
Sc05g0005650 Simmondsia chinensis HOM05D006933 ORTHO05D009629 3.6e-06 56.2 81 37.0
Ah.06g183510 Amaranthus hybridus HOM05D008762 ORTHO05D011252 4.7e-06 55.8 88 34.1
Rhsim08G0091100 Rhododendron simsii HOM05D008219 ORTHO05D009356 4.7e-06 55.8 64 37.5
Sc06g0004260 Simmondsia chinensis HOM05D006933 ORTHO05D009629 4.7e-06 55.8 76 35.5
Ah.08g219500 Amaranthus hybridus HOM05D008762 ORTHO05D011252 6.1e-06 55.5 79 38.0
Lj1g0018935 Lotus japonicus HOM05D008220 ORTHO05D010358 6.1e-06 55.5 218 23.4
LjContig00127g0011774 Lotus japonicus HOM05D008220 ORTHO05D010358 6.1e-06 55.5 235 20.9
Lalb_Chr01g0012751 Lupinus albus HOM05D002777 ORTHO05D001516 6.1e-06 55.5 113 24.8
Ah.10g026690 Amaranthus hybridus HOM05D008762 ORTHO05D011252 8.0e-06 55.1 79 30.4
Lj1g0011765 Lotus japonicus HOM05D008220 ORTHO05D010358 8.0e-06 55.1 240 22.1
Rhsim09G0140400 Rhododendron simsii HOM05D008219 ORTHO05D009356 8.0e-06 55.1 61 39.3


User provided reference genes

Program Settings