Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc14g0002520 Simmondsia chinensis HOM05D009209 ORTHO05D011705 1.1e-130 469.9 230 100.0
Sc15g0003580 Simmondsia chinensis HOM05D009209 ORTHO05D011705 1.9e-42 176.8 149 61.7
Sc21g0004040 Simmondsia chinensis HOM05D009209 ORTHO05D011705 1.9e-42 176.8 162 55.6
Sc17g0002300 Simmondsia chinensis HOM05D009209 ORTHO05D011705 3.3e-42 176.0 141 60.3
Sc15g0001330 Simmondsia chinensis HOM05D009209 ORTHO05D011705 9.5e-42 174.5 160 56.2
Sc03g0004550 Simmondsia chinensis HOM05D009209 ORTHO05D011705 1.5e-39 167.2 160 51.2
Sc17g0002350 Simmondsia chinensis HOM05D009209 ORTHO05D011705 5.1e-35 152.1 105 65.7
Sc03g0004450 Simmondsia chinensis HOM05D009209 ORTHO05D011705 1.9e-34 150.2 105 65.7
Sc11g0007070 Simmondsia chinensis HOM05D009209 ORTHO05D011705 1.6e-25 120.6 154 40.3
Sc15g0000880 Simmondsia chinensis HOM05D009209 ORTHO05D011705 2.6e-15 86.7 56 66.1
Sc01g0007590 Simmondsia chinensis HOM05D009209 ORTHO05D011705 3.4e-15 86.3 54 68.5
Sc15g0003590 Simmondsia chinensis HOM05D009209 ORTHO05D011057 4.6e-12 75.9 60 63.3
Sc14g0002620 Simmondsia chinensis HOM05D009209 ORTHO05D011705 1.9e-10 70.5 42 69.0
Sc02g0007350 Simmondsia chinensis HOM05D011136 ORTHO05D010856 4.3e-10 69.3 103 31.1
CSS0025340 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 1.3e-09 67.8 122 32.8
Sc13g0007440 Simmondsia chinensis HOM05D009348 ORTHO05D010856 2.8e-09 66.6 133 28.6
CSS0000615 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 3.7e-09 66.2 122 32.8
CSS0042161 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 4.8e-09 65.9 122 32.8
EL10Ac5g12917 Beta vulgaris HOM05D008976 ORTHO05D011121 6.2e-09 65.5 84 32.1
EL10Ac6g13580 Beta vulgaris HOM05D008976 ORTHO05D011121 6.2e-09 65.5 84 32.1
EL10Ac1g00211 Beta vulgaris HOM05D008976 ORTHO05D011121 1.1e-08 64.7 98 36.7
EL10Ac6g15260 Beta vulgaris HOM05D008976 ORTHO05D011121 1.8e-08 63.9 98 36.7
Sc03g0004030 Simmondsia chinensis HOM05D009209 ORTHO05D011705 2.4e-08 63.5 58 56.9
Sc03g0004050 Simmondsia chinensis HOM05D009209 ORTHO05D011705 2.4e-08 63.5 58 56.9
Sc07g0006130 Simmondsia chinensis HOM05D009209 ORTHO05D009629 2.4e-08 63.5 66 54.5
EL10Ac1g00331 Beta vulgaris HOM05D008976 ORTHO05D011121 4.0e-08 62.8 142 25.4
CSS0028826 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 4.0e-08 62.8 100 34.0
Sc24g0004230 Simmondsia chinensis HOM05D009348 ORTHO05D010856 4.0e-08 62.8 163 25.8
vmacro00512 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 4.0e-08 62.8 178 26.4
Gohir.A01G136601 Gossypium hirsutum HOM05D000003 ORTHO05D015081 1.2e-07 61.2 122 27.9
Sc02g0003510 Simmondsia chinensis HOM05D009348 ORTHO05D010856 1.2e-07 61.2 101 27.7
Actinidia34556 Actinidia chinensis HOM05D008219 ORTHO05D009356 1.5e-07 60.8 153 24.8
Sc16g0001340 Simmondsia chinensis HOM05D009348 ORTHO05D010856 2.6e-07 60.1 90 30.0
Sc21g0001740 Simmondsia chinensis HOM05D011136 ORTHO05D010856 2.6e-07 60.1 87 32.2
Sc13g0007280 Simmondsia chinensis HOM05D009209 ORTHO05D011057 4.5e-07 59.3 52 57.7
CSS0004424 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 5.8e-07 58.9 88 33.0
Gohir.A06G194460 Gossypium hirsutum HOM05D000003 ORTHO05D015081 5.8e-07 58.9 161 26.1
vmacro01896 Vaccinium macrocarpon HOM05D008219 ORTHO05D009356 7.6e-07 58.5 170 27.1
EL10Ac7g16632 Beta vulgaris HOM05D008976 ORTHO05D011121 1.3e-06 57.8 72 31.9
Sc22g0001820 Simmondsia chinensis HOM05D009348 ORTHO05D010856 1.3e-06 57.8 204 21.1
vmacro12106 Vaccinium macrocarpon HOM05D000081 ORTHO05D009356 1.7e-06 57.4 135 28.1
Actinidia12169 Actinidia chinensis HOM05D012898 ORTHO05D009356 2.2e-06 57.0 81 32.1
RhsimUnG0239600 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.2e-06 57.0 78 37.2
EL10Ac3g05379 Beta vulgaris HOM05D008976 ORTHO05D011121 2.9e-06 56.6 97 33.0
CSS0042776 Camellia sinensis var. sinensis HOM05D012808 ORTHO05D011705 2.9e-06 56.6 103 33.0
DCAR_022968 Daucus carota HOM05D004122 ORTHO05D004468 2.9e-06 56.6 120 28.3
Rhsim04G0141400 Rhododendron simsii HOM05D008219 ORTHO05D009356 2.9e-06 56.6 101 29.7
Sc11g0007570 Simmondsia chinensis HOM05D000027 ORTHO05D000500 2.9e-06 56.6 68 33.8
TPR.G27496 Trifolium pratense HOM05D000003 ORTHO05D000004 2.9e-06 56.6 178 27.0
EL10Ac2g02473 Beta vulgaris HOM05D008976 ORTHO05D011121 3.8e-06 56.2 132 22.0
EL10Ac4g09899 Beta vulgaris HOM05D008976 ORTHO05D011121 3.8e-06 56.2 65 33.8
Rhsim07G0230400 Rhododendron simsii HOM05D008219 ORTHO05D009356 3.8e-06 56.2 97 26.8
EL10Ac5g12223 Beta vulgaris HOM05D008976 ORTHO05D011121 4.9e-06 55.8 97 32.0
Actinidia36659 Actinidia chinensis HOM05D012898 ORTHO05D009356 6.4e-06 55.5 52 42.3
Rhsim11G0140400 Rhododendron simsii HOM05D000026 ORTHO05D009356 6.4e-06 55.5 163 25.8
Sc10g0009390 Simmondsia chinensis HOM05D011136 ORTHO05D010856 6.4e-06 55.5 108 25.0
EL10Ac8g19650 Beta vulgaris HOM05D000992 ORTHO05D006704 8.4e-06 55.1 72 36.1


User provided reference genes

Program Settings