Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc14g0002130 Simmondsia chinensis HOM05D006293 ORTHO05D007971 6.8e-179 630.6 324 100.0
GSVIVG01024071001 Vitis vinifera HOM05D006293 ORTHO05D007971 1.2e-93 347.4 322 59.9
Rhsim11G0188600 Rhododendron simsii HOM05D006293 ORTHO05D007971 1.4e-91 340.5 339 56.0
Gorai.002G193700 Gossypium raimondii HOM05D006293 ORTHO05D007971 1.6e-90 337.0 316 58.2
EL10Ac9g21428 Beta vulgaris HOM05D006293 ORTHO05D007971 2.0e-90 336.7 363 50.1
Peaxi162Scf00362g00956 Petunia axillaris HOM05D001375 ORTHO05D001222 2.7e-90 336.3 311 57.6
Gohir.D01G156200 Gossypium hirsutum HOM05D006293 ORTHO05D007971 4.5e-90 335.5 316 57.9
TAR376G0811 Trochodendron aralioides HOM05D006293 ORTHO05D007971 7.8e-90 334.7 315 56.8
Gohir.A01G164300 Gossypium hirsutum HOM05D006293 ORTHO05D007971 1.0e-89 334.3 317 58.0
Manes.11G090800 Manihot esculenta HOM05D006293 ORTHO05D007971 1.0e-89 334.3 314 57.6
Lsat_1_v5_gn_8_126000 Lactuca sativa HOM05D006293 ORTHO05D007971 2.9e-89 332.8 310 53.2
vmacro02255 Vaccinium macrocarpon HOM05D006293 ORTHO05D007971 2.9e-89 332.8 330 55.8
Dinv04963 Davidia involucrata HOM05D006293 ORTHO05D007971 3.9e-89 332.4 316 56.6
SGA_v2.0_scaffold32G13265 Striga asiatica HOM05D006293 ORTHO05D007971 5.0e-89 332.0 316 53.8
QL11p047722 Quercus lobata HOM05D006293 ORTHO05D007971 1.5e-88 330.5 336 54.5
Cfa005191 Carpinus fangiana HOM05D006293 ORTHO05D007971 1.9e-88 330.1 329 56.5
Oeu014457.2 Olea europaea HOM05D006293 ORTHO05D007971 2.8e-87 326.2 323 55.7
FAN15G0431 Fragaria x ananassa HOM05D006293 ORTHO05D007971 4.7e-87 325.5 336 54.2
CAN.G588.32 Capsicum annuum HOM05D006293 ORTHO05D007971 6.1e-87 325.1 321 53.9
Oeu060421.1 Olea europaea HOM05D006293 ORTHO05D007971 8.0e-87 324.7 314 56.1
Haze_02189 Corylus avellana HOM05D006293 ORTHO05D007971 1.4e-86 323.9 326 56.4
COL.COLO4_17266 Corchorus olitorius HOM05D006293 ORTHO05D007971 3.1e-86 322.8 323 55.7
Solyc01g111210.3 Solanum lycopersicum HOM05D001375 ORTHO05D001222 3.1e-86 322.8 314 50.6
HanXRQChr17g0557851 Helianthus annuus HOM05D006293 ORTHO05D007971 4.0e-86 322.4 324 53.1
Sopen01g053260 Solanum pennellii HOM05D006293 ORTHO05D007971 4.0e-86 322.4 315 50.5
PGSC0003DMG400001627 Solanum tuberosum HOM05D006293 ORTHO05D007971 8.9e-86 321.2 320 53.8
Hund06410 Selenicereus undatus HOM05D006293 ORTHO05D007971 1.2e-85 320.9 327 54.7
THA.LOC104804336 Tarenaya hassleriana HOM05D006293 ORTHO05D007971 1.2e-85 320.9 318 54.7
ClCG02G011620 Citrullus lanatus HOM05D006293 ORTHO05D007971 1.5e-85 320.5 322 54.7
Duzib132G0283 Durio zibethinus HOM05D006293 ORTHO05D007971 1.5e-85 320.5 313 57.2
Thecc.02G066200 Theobroma cacao HOM05D006293 ORTHO05D007971 3.4e-85 319.3 317 54.9
TWI31G0553 Tripterygium wilfordii HOM05D006293 ORTHO05D007971 5.8e-85 318.5 315 57.1
Sed0004865 Sechium edule HOM05D006293 ORTHO05D007971 7.5e-85 318.2 324 54.3
Nn5g29105 Nelumbo nucifera HOM05D006293 ORTHO05D007971 1.3e-84 317.4 316 52.5
MD05G1116900 Malus domestica HOM05D006293 ORTHO05D007971 2.2e-84 316.6 338 53.3
Prupe.8G161400 Prunus persica HOM05D006293 ORTHO05D007971 2.2e-84 316.6 345 51.9
Cpa.g.sc37.182 Carica papaya HOM05D006293 ORTHO05D007971 3.7e-84 315.8 326 55.2
Eucgr.G01761 Eucalyptus grandis HOM05D006293 ORTHO05D007971 3.7e-84 315.8 323 54.8
AUR62010081 Chenopodium quinoa HOM05D006293 ORTHO05D007971 4.9e-84 315.5 339 48.4
Cc02_g16450 Coffea canephora HOM05D006293 ORTHO05D007971 8.3e-84 314.7 314 53.5
FAN20G1949 Fragaria x ananassa HOM05D006293 ORTHO05D007971 8.3e-84 314.7 347 52.2
ECA233G0605 Erigeron canadensis HOM05D001375 ORTHO05D001222 1.1e-83 314.3 314 52.9
CiPaw.05G077900 Carya illinoinensis HOM05D006293 ORTHO05D007971 1.4e-83 313.9 305 56.4
Glyma.06G004900 Glycine max HOM05D006293 ORTHO05D007971 1.9e-83 313.5 323 53.6
FvH4_2g01740 Fragaria vesca HOM05D006293 ORTHO05D007971 2.4e-83 313.2 346 51.7
FAN24G1019 Fragaria x ananassa HOM05D006293 ORTHO05D007971 2.4e-83 313.2 358 50.6
Potri.004G169200 Populus trichocarpa HOM05D006293 ORTHO05D007971 4.1e-83 312.4 321 53.0
RcHm_v2.0_Chr6g0244771 Rosa chinensis HOM05D006293 ORTHO05D007971 7.0e-83 311.6 332 53.0
DCAR_003705 Daucus carota HOM05D006293 ORTHO05D007971 9.2e-83 311.2 311 51.1
Migut.B00115 Erythranthe guttata HOM05D006293 ORTHO05D007971 9.2e-83 311.2 315 50.5
Glyma.04G005100 Glycine max HOM05D006293 ORTHO05D007971 9.2e-83 311.2 340 51.5
FAN27G2989 Fragaria x ananassa HOM05D006293 ORTHO05D007971 1.2e-82 310.8 339 52.2
VMungo1309G1166 Vigna mungo HOM05D006293 ORTHO05D007971 3.5e-82 309.3 321 54.2
Nitab4.5_0000980g0060 Nicotiana tabacum HOM05D001375 ORTHO05D001222 4.6e-82 308.9 307 56.0
Rhsim11G0188500 Rhododendron simsii HOM05D006293 ORTHO05D007971 4.6e-82 308.9 384 47.9
AUR62013075 Chenopodium quinoa HOM05D006293 ORTHO05D007971 6.0e-82 308.5 339 47.5
TAR536G0014 Trochodendron aralioides HOM05D006293 ORTHO05D007971 7.8e-82 308.1 323 50.5
Ah.01g022670 Amaranthus hybridus HOM05D006293 ORTHO05D007971 1.7e-81 307.0 333 48.9
CANSAT25G1913 Cannabis sativa HOM05D006293 ORTHO05D007971 3.0e-81 306.2 343 50.1
CSS0030950 Camellia sinensis var. sinensis HOM05D006293 ORTHO05D007971 7.3e-80 301.6 318 52.2
Lj5C183T16 Lonicera japonica HOM05D006293 ORTHO05D007971 7.3e-80 301.6 334 50.9
Phvul.009G025500 Phaseolus vulgaris HOM05D006293 ORTHO05D007971 1.2e-79 300.8 320 52.8
Ah.01g009070 Amaranthus hybridus HOM05D006293 ORTHO05D007971 3.6e-79 299.3 322 48.1
Lj1g0023631 Lotus japonicus HOM05D006293 ORTHO05D007971 3.6e-79 299.3 326 54.0
Ciclev10028711m.g Citrus clementina HOM05D006293 ORTHO05D007971 4.7e-79 298.9 365 47.9
Ca_15314_v3 Cicer arietinum L. HOM05D006293 ORTHO05D007971 1.8e-78 297.0 305 52.5
MSTRG.16884 Avicennia marina HOM05D006293 ORTHO05D007971 3.1e-78 296.2 349 50.1
Lalb_Chr23g0265081 Lupinus albus HOM05D006293 ORTHO05D007971 3.1e-78 296.2 335 50.7
TAR628G0693 Trochodendron aralioides HOM05D006293 ORTHO05D007971 5.8e-77 292.0 320 49.7
MELO3C020791.2 Cucumis melo HOM05D006293 ORTHO05D007971 7.5e-77 291.6 303 50.8
Medtr3g117760 Medicago truncatula HOM05D006293 ORTHO05D007971 4.1e-75 285.8 319 46.4
Nn1g05912 Nelumbo nucifera HOM05D006293 ORTHO05D007971 7.1e-75 285.0 315 48.3
CARHR106850 Cardamine hirsuta HOM05D006293 ORTHO05D007971 4.6e-74 282.3 335 46.6
ATR0810G191 Amborella trichopoda HOM05D006293 ORTHO05D007971 1.0e-73 281.2 310 47.1
MBI05_g07501_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 5.6e-72 275.4 314 46.5
TPR.G38570 Trifolium pratense HOM05D006293 ORTHO05D007971 3.6e-71 272.7 309 48.5
BolC9t54199H Brassica oleracea HOM05D006293 ORTHO05D007971 6.2e-71 271.9 337 46.6
BcaC04g23011 Brassica carinata HOM05D006293 ORTHO05D007971 1.4e-70 270.8 337 46.6
AL3G49260 Arabidopsis lyrata HOM05D006293 ORTHO05D007971 2.3e-70 270.0 321 48.0
MBI05_g47219_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 3.1e-70 269.6 314 46.2
C09p13060 Brassica napus HOM05D006293 ORTHO05D007971 4.0e-70 269.2 337 46.3
Psat5g003040 Pisum sativum HOM05D006293 ORTHO05D007971 4.0e-70 269.2 329 47.4
Dinv41970 Davidia involucrata HOM05D006293 ORTHO05D007971 5.2e-70 268.9 268 51.9
Carub.0003s3038 Capsella rubella HOM05D006293 ORTHO05D007971 8.9e-70 268.1 344 44.5
MBI05_g30117_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 8.9e-70 268.1 314 45.5
BcaB07g31757 Brassica carinata HOM05D006293 ORTHO05D007971 2.0e-69 266.9 347 46.4
AT2G16630 Arabidopsis thaliana HOM05D006293 ORTHO05D007971 5.8e-69 265.4 360 43.1
A09p11050 Brassica napus HOM05D006293 ORTHO05D007971 7.6e-69 265.0 336 45.5
BraA09t36749Z Brassica rapa HOM05D006293 ORTHO05D007971 7.6e-69 265.0 341 45.2
HanXRQChr10g0298941 Helianthus annuus HOM05D006293 ORTHO05D007971 9.9e-69 264.6 341 42.8
PSO170G2363 Papaver somniferum HOM05D006293 ORTHO05D007971 1.7e-68 263.8 351 45.9
PSO700G0292 Papaver somniferum HOM05D006293 ORTHO05D007971 1.7e-68 263.8 319 47.0
BraA07t28238Z Brassica rapa HOM05D006293 ORTHO05D007971 8.3e-68 261.5 336 44.0
BcaC06g36161 Brassica carinata HOM05D006293 ORTHO05D007971 2.4e-67 260.0 336 43.8
A07p04460 Brassica napus HOM05D006293 ORTHO05D007971 2.4e-67 260.0 336 44.3
C07p07090 Brassica napus HOM05D006293 ORTHO05D007971 2.4e-67 260.0 336 43.8
BolC7t41128H Brassica oleracea HOM05D006293 ORTHO05D007971 2.4e-67 260.0 336 43.8
Aa31LG8G13900 Aethionema arabicum HOM05D006293 ORTHO05D007971 3.2e-67 259.6 321 46.7
Sp3g30120 Schrenkiella parvula HOM05D006293 ORTHO05D007971 2.7e-66 256.5 371 43.1
MBI05_g48109_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 3.9e-65 252.7 314 44.6
CsaV3_2G015780 Cucumis sativus L. HOM05D006293 ORTHO05D007971 5.1e-65 252.3 326 47.5
Thhalv10022734m.g Eutrema salsugineum HOM05D006293 ORTHO05D007971 6.6e-65 251.9 377 42.2
HPP92_013009 Vanilla planifolia HOM05D006293 ORTHO05D007971 2.8e-63 246.5 301 44.2
Aqoxy5G00988 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 1.5e-61 240.7 309 44.3
CDE05G1002 Ceratophyllum demersum HOM05D006293 ORTHO05D007971 1.3e-57 227.6 310 40.3
unitig_0.g43 Utricularia gibba HOM05D006293 ORTHO05D007971 3.3e-56 223.0 319 40.1
SEGI_19356 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 8.1e-55 218.4 322 40.4
Aqoxy1G01171 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 6.4e-52 208.8 262 47.7
unitig_0.g827 Utricularia gibba HOM05D006293 ORTHO05D007971 1.9e-51 207.2 319 38.2
SEGI_14996 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 9.0e-46 188.3 333 36.9
MSTRG.20014 Avicennia marina HOM05D006293 ORTHO05D007971 4.5e-45 186.0 202 55.9
MBI05_g21530_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 1.6e-42 177.6 230 41.7
PGR042G0330 Punica granatum HOM05D006293 ORTHO05D007971 1.3e-41 174.5 384 33.3
MD10G1120100 Malus domestica HOM05D006293 ORTHO05D007971 1.8e-41 174.1 128 62.5
BcaB03g16385 Brassica carinata HOM05D006293 ORTHO05D007971 1.5e-40 171.0 344 35.5
Gohir.1Z049391 Gossypium hirsutum HOM05D006293 ORTHO05D007971 5.6e-40 169.1 157 62.4
Nitab4.5_0000283g0050 Nicotiana tabacum HOM05D001375 ORTHO05D001222 7.4e-40 168.7 310 33.9
MD10G1120000 Malus domestica HOM05D006293 ORTHO05D007971 3.8e-36 156.4 123 58.5
ECA234G1535 Erigeron canadensis HOM05D001991 ORTHO05D007971 6.0e-34 149.1 167 43.1
Mapoly0014s0128 Marchantia polymorpha HOM05D006293 ORTHO05D007971 5.1e-33 146.0 326 31.6
Pp3c14_8250 Physcomitrium patens HOM05D006293 ORTHO05D007971 6.2e-31 139.0 296 31.8
Pp3c1_27500 Physcomitrium patens HOM05D006293 ORTHO05D007971 5.0e-28 129.4 302 30.5
Aqoxy6G00177 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 2.7e-26 123.6 305 29.8
SMO223G0025 Selaginella moellendorffii HOM05D006293 ORTHO05D007971 6.1e-26 122.5 332 26.8
Zm00001eb210030 Zea mays HOM05D006293 ORTHO05D007971 6.9e-22 109.0 121 44.6
MBI05_g31848_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 5.0e-20 102.8 102 47.1
SEGI_23181 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 6.5e-20 102.4 227 30.4
Actinidia00600 Actinidia chinensis HOM05D006293 ORTHO05D007971 2.6e-13 80.5 141 34.0
SGA_v2.0_scaffold9G04828 Striga asiatica HOM05D006293 ORTHO05D007971 1.4e-11 74.7 56 58.9
SMO367G0707 Selaginella moellendorffii HOM05D007363 ORTHO05D009018 3.6e-10 70.1 92 42.4
Mapoly0022s0141 Marchantia polymorpha HOM05D021038 ORTHO05D009018 1.4e-06 58.2 113 33.6
SEGI_36288 Sequoiadendron giganteum HOM05D007363 ORTHO05D009018 4.1e-06 56.6 85 40.0


User provided reference genes

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