Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc14g0000990 Simmondsia chinensis HOM05D006038 ORTHO05D007547 4.0e-204 714.5 363 100.0
EL10Ac8g18905 Beta vulgaris HOM05D006038 ORTHO05D007547 2.2e-125 453.0 369 61.8
Hund08960 Selenicereus undatus HOM05D006038 ORTHO05D007547 1.6e-123 446.8 368 61.4
Ah.14g084370 Amaranthus hybridus HOM05D001135 ORTHO05D001005 1.9e-108 396.7 353 58.6
Dinv42816 Davidia involucrata HOM05D006038 ORTHO05D007547 2.4e-108 396.4 361 57.3
Dinv43284 Davidia involucrata HOM05D006038 ORTHO05D007547 2.4e-108 396.4 361 57.3
GSVIVG01023690001 Vitis vinifera HOM05D006038 ORTHO05D007547 9.2e-108 394.4 359 57.9
CSS0049632 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.9e-106 389.0 360 59.2
QL02p094222 Quercus lobata HOM05D006038 ORTHO05D007547 6.6e-106 388.3 358 58.4
CSS0019709 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.3e-105 386.0 360 59.2
AUR62028377 Chenopodium quinoa HOM05D006038 ORTHO05D007547 9.6e-105 384.4 264 69.3
CSS0006550 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.1e-104 383.3 362 58.3
MD10G1281400 Malus domestica HOM05D006038 ORTHO05D007547 3.6e-104 382.5 356 56.5
Manes.14G113700 Manihot esculenta HOM05D006038 ORTHO05D007547 1.4e-103 380.6 358 56.4
Thecc.09G154200 Theobroma cacao HOM05D006038 ORTHO05D007547 1.8e-103 380.2 360 57.2
CiPaw.15G164200 Carya illinoinensis HOM05D006038 ORTHO05D007547 2.4e-103 379.8 359 58.2
CANSAT11G1787 Cannabis sativa HOM05D006038 ORTHO05D007547 3.1e-103 379.4 364 54.9
Lalb_Chr13g0300671 Lupinus albus HOM05D006038 ORTHO05D007547 2.0e-102 376.7 362 55.5
Lj4g0023904 Lotus japonicus HOM05D006038 ORTHO05D007547 9.9e-102 374.4 361 55.7
Phvul.003G153400 Phaseolus vulgaris HOM05D006038 ORTHO05D007547 9.9e-102 374.4 362 56.1
MELO3C004111.2 Cucumis melo HOM05D006038 ORTHO05D007547 1.3e-101 374.0 373 55.0
Cc06_g14480 Coffea canephora HOM05D006038 ORTHO05D007547 1.7e-101 373.6 365 54.5
Prupe.1G102000 Prunus persica HOM05D006038 ORTHO05D007547 1.7e-101 373.6 358 56.1
Glyma.02G206900 Glycine max HOM05D006038 ORTHO05D007547 2.2e-101 373.2 360 55.3
CsaV3_2G007740 Cucumis sativus L. HOM05D006038 ORTHO05D007547 2.9e-101 372.9 371 55.5
TWI63G0196 Tripterygium wilfordii HOM05D006038 ORTHO05D007547 2.9e-101 372.9 364 55.2
TAR625G0922 Trochodendron aralioides HOM05D006038 ORTHO05D007547 2.9e-101 372.9 359 56.5
Sed0013580 Sechium edule HOM05D006038 ORTHO05D007547 3.8e-101 372.5 371 53.6
AUR62025374 Chenopodium quinoa HOM05D006038 ORTHO05D007547 6.4e-101 371.7 241 71.4
Aqoxy7G02400 Aquilegia oxysepala HOM05D006038 ORTHO05D007547 1.9e-100 370.2 364 54.7
PGR114G0005 Punica granatum HOM05D006038 ORTHO05D007547 1.9e-100 370.2 358 55.9
PGR142G2424 Punica granatum HOM05D006038 ORTHO05D007547 1.9e-100 370.2 358 55.9
Sopen07g002150 Solanum pennellii HOM05D006038 ORTHO05D007547 1.9e-100 370.2 362 57.5
PGSC0003DMG400011212 Solanum tuberosum HOM05D006038 ORTHO05D007547 1.9e-100 370.2 362 57.2
ECA236G4218 Erigeron canadensis HOM05D006038 ORTHO05D007547 4.2e-100 369.0 359 56.3
Solyc07g006010.3 Solanum lycopersicum HOM05D006038 ORTHO05D007547 1.2e-99 367.5 362 57.2
Glyma.17G071100 Glycine max HOM05D006038 ORTHO05D007547 1.6e-99 367.1 361 54.8
Gohir.D05G008700 Gossypium hirsutum HOM05D006038 ORTHO05D007547 3.5e-99 365.9 365 55.1
Gorai.009G008900 Gossypium raimondii HOM05D006038 ORTHO05D007547 3.5e-99 365.9 365 55.1
Psat4g010160 Pisum sativum HOM05D006038 ORTHO05D007547 3.5e-99 365.9 359 54.3
Ca_21155_v3 Cicer arietinum L. HOM05D006038 ORTHO05D007547 7.8e-99 364.8 361 54.8
Rhsim03G0259500 Rhododendron simsii HOM05D006038 ORTHO05D007547 1.3e-98 364.0 343 58.0
Ciclev10008825m.g Citrus clementina HOM05D006038 ORTHO05D007547 2.3e-98 363.2 354 54.5
Gohir.A05G007900 Gossypium hirsutum HOM05D006038 ORTHO05D007547 5.1e-98 362.1 365 54.5
Cpa.g.sc199.14 Carica papaya HOM05D006038 ORTHO05D007547 6.6e-98 361.7 367 53.7
Cfa020781 Carpinus fangiana HOM05D006038 ORTHO05D007547 6.6e-98 361.7 358 55.6
Haze_19138 Corylus avellana HOM05D006038 ORTHO05D007547 6.6e-98 361.7 382 53.1
CSS0009428 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.1e-97 360.9 346 59.0
Peaxi162Scf00563g00418 Petunia axillaris HOM05D006038 ORTHO05D007547 1.1e-97 360.9 359 56.0
TPR.G22112 Trifolium pratense HOM05D006038 ORTHO05D007547 1.1e-97 360.9 359 54.0
VMungo1215G1375 Vigna mungo HOM05D006038 ORTHO05D007547 2.5e-97 359.8 362 54.4
DCAR_020091 Daucus carota HOM05D006038 ORTHO05D007547 3.3e-97 359.4 361 54.3
Medtr4g130280 Medicago truncatula HOM05D006038 ORTHO05D007547 5.6e-97 358.6 362 53.0
Nn8g40105 Nelumbo nucifera HOM05D006038 ORTHO05D007547 7.3e-97 358.2 359 54.3
Atru.chr7.352 Acer truncatum HOM05D006038 ORTHO05D007547 1.6e-96 357.1 362 53.6
RcHm_v2.0_Chr4g0405491 Rosa chinensis HOM05D006038 ORTHO05D007547 1.6e-96 357.1 356 54.8
Actinidia38659 Actinidia chinensis HOM05D006038 ORTHO05D007547 2.8e-96 356.3 358 54.7
FAN17G0258 Fragaria x ananassa HOM05D006038 ORTHO05D007547 2.8e-96 356.3 356 54.2
THA.LOC104803556 Tarenaya hassleriana HOM05D006038 ORTHO05D007547 8.1e-96 354.8 363 51.2
MSTRG.6162 Avicennia marina HOM05D006038 ORTHO05D007547 2.4e-95 353.2 364 53.8
FAN22G1283 Fragaria x ananassa HOM05D006038 ORTHO05D007547 2.4e-95 353.2 356 53.9
FvH4_4g09770 Fragaria vesca HOM05D006038 ORTHO05D007547 6.9e-95 351.7 356 53.7
ClCG02G014260 Citrullus lanatus HOM05D006038 ORTHO05D007547 9.0e-95 351.3 389 50.6
Nitab4.5_0002809g0020 Nicotiana tabacum HOM05D006038 ORTHO05D007547 1.5e-94 350.5 375 53.3
Potri.006G180300 Populus trichocarpa HOM05D006038 ORTHO05D007547 3.4e-94 349.4 366 52.5
CAN.G1190.21 Capsicum annuum HOM05D006038 ORTHO05D007547 4.5e-94 349.0 362 55.0
AL7G21280 Arabidopsis lyrata HOM05D006038 ORTHO05D007547 9.9e-94 347.8 366 50.5
Migut.J01393 Erythranthe guttata HOM05D006038 ORTHO05D007547 9.9e-94 347.8 363 51.8
Lsat_1_v5_gn_8_64821 Lactuca sativa HOM05D006038 ORTHO05D007547 9.9e-94 347.8 347 55.3
CARHR238700 Cardamine hirsuta HOM05D006038 ORTHO05D007547 1.7e-93 347.1 366 50.8
SGA_v2.0_scaffold265G46074 Striga asiatica HOM05D006038 ORTHO05D007547 2.9e-93 346.3 379 49.9
PSO170G4900 Papaver somniferum HOM05D006038 ORTHO05D007547 4.9e-93 345.5 360 52.8
FAN07G2585 Fragaria x ananassa HOM05D006038 ORTHO05D007547 1.1e-92 344.4 356 53.1
CSS0047764 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.4e-92 344.0 357 54.6
MBI15_g26068_MAGBIO Magnolia biondii HOM05D006038 ORTHO05D007547 1.4e-92 344.0 342 56.1
HanXRQChr06g0179781 Helianthus annuus HOM05D006038 ORTHO05D007547 1.9e-92 343.6 359 52.4
Sp7g28720 Schrenkiella parvula HOM05D006038 ORTHO05D007547 1.9e-92 343.6 363 50.1
Sabra06G0137300 Salix brachista HOM05D006038 ORTHO05D007547 3.2e-92 342.8 366 51.6
CDE04G0171 Ceratophyllum demersum HOM05D006038 ORTHO05D007547 4.2e-92 342.4 361 52.1
Carub.0007s0972 Capsella rubella HOM05D006038 ORTHO05D007547 5.4e-92 342.0 366 50.0
PSO017G0013 Papaver somniferum HOM05D006038 ORTHO05D007547 1.2e-91 340.9 360 52.8
CSS0029746 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.1e-91 340.1 360 54.4
AT4G30840 Arabidopsis thaliana HOM05D006038 ORTHO05D007547 3.5e-91 339.3 365 49.9
BcaNung02736 Brassica carinata HOM05D006038 ORTHO05D007547 6.7e-90 335.1 364 51.6
BraA03t15077Z Brassica rapa HOM05D006038 ORTHO05D007547 8.7e-90 334.7 364 51.6
Aa31LG2G19530 Aethionema arabicum HOM05D006038 ORTHO05D007547 1.3e-88 330.9 366 50.0
ATR0580G061 Amborella trichopoda HOM05D006038 ORTHO05D007547 5.3e-87 325.5 356 48.6
Nitab4.5_0001036g0170 Nicotiana tabacum HOM05D006038 ORTHO05D007547 2.0e-86 323.6 360 53.3
HPP92_020613 Vanilla planifolia HOM05D006038 ORTHO05D007547 1.3e-85 320.9 359 50.7
BcaNung01557 Brassica carinata HOM05D006038 ORTHO05D007547 7.9e-83 311.6 347 50.7
C07p58240 Brassica napus HOM05D006038 ORTHO05D007547 7.9e-83 311.6 346 51.4
BolC7t46282H Brassica oleracea HOM05D006038 ORTHO05D007547 1.0e-82 311.2 346 51.4
A03p60370 Brassica napus HOM05D006038 ORTHO05D007547 1.3e-82 310.8 346 51.7
vmacro06051 Vaccinium macrocarpon HOM05D006038 ORTHO05D007547 3.1e-79 299.7 368 47.3
Os08g0266600 Oryza sativa ssp. japonica HOM05D006038 ORTHO05D007547 4.0e-79 299.3 354 49.4
Zm00001eb177980 Zea mays HOM05D006038 ORTHO05D007547 6.9e-79 298.5 350 47.1
Eucgr.K03188 Eucalyptus grandis HOM05D006038 ORTHO05D007547 7.1e-76 288.5 337 51.0
Thhalv10025548m.g Eutrema salsugineum HOM05D006038 ORTHO05D007547 1.1e-63 248.1 301 47.2
SMO367G0193 Selaginella moellendorffii HOM05D006038 ORTHO05D007547 1.1e-60 238.0 358 41.6
Dinv41342 Davidia involucrata HOM05D006038 ORTHO05D007547 7.9e-59 231.9 239 54.0
Oeu027617.1 Olea europaea HOM05D006038 ORTHO05D007547 1.4e-58 231.1 166 65.1
arahy.Tifrunner.gnm1.ann1.3R6I6F Arachis hypogaea HOM05D006038 ORTHO05D007547 1.8e-55 220.7 235 54.5
AagrBONN_evm.TU.Sc2ySwM_117.2538 Anthoceros agrestis HOM05D006038 ORTHO05D007547 8.8e-50 201.8 377 36.6
SHI18668 Sapria himalayana HOM05D006038 ORTHO05D007547 2.8e-48 196.8 313 39.6
Lj7A464G38 Lonicera japonica HOM05D006038 ORTHO05D007547 1.8e-47 194.1 146 63.7
CSS0027410 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.2e-43 181.4 210 53.8
CSS0009266 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.6e-43 179.9 212 53.8
COL.COLO4_05400 Corchorus olitorius HOM05D006038 ORTHO05D007547 1.0e-42 178.3 212 49.1
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 1.4e-42 177.9 381 32.8
CSS0013086 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 5.2e-42 176.0 210 52.9
A01p07320 Brassica napus HOM05D006038 ORTHO05D007547 9.7e-41 171.8 123 64.2
Cfa020780 Carpinus fangiana HOM05D006038 ORTHO05D007547 3.7e-40 169.9 213 49.3
SEGI_08614 Sequoiadendron giganteum HOM05D006038 ORTHO05D007547 4.1e-39 166.4 141 52.5
Lj7A464T42 Lonicera japonica HOM05D006038 ORTHO05D007547 1.6e-38 164.5 218 47.7
CSS0022095 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.6e-35 153.3 124 58.9
Pp3c6_28770 Physcomitrium patens HOM05D006038 ORTHO05D007547 1.8e-31 141.0 169 45.0
CSS0024276 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.4e-25 120.2 147 51.7
CSS0047172 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.6e-19 100.1 65 67.7
CSS0031036 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.4e-17 93.6 65 61.5
CSS0034156 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 3.5e-14 83.6 65 61.5
BcaNung03435 Brassica carinata HOM05D001147 ORTHO05D000823 1.8e-10 71.2 107 42.1
Zm00001eb124580 Zea mays HOM05D006038 ORTHO05D007547 2.9e-08 63.9 72 47.2
Zm00001eb038770 Zea mays HOM05D006038 ORTHO05D007547 1.1e-07 62.0 53 56.6
Zm00001eb046820 Zea mays HOM05D006038 ORTHO05D007547 1.1e-07 62.0 53 56.6
Zm00001eb051760 Zea mays HOM05D006038 ORTHO05D007547 1.1e-07 62.0 53 56.6
Zm00001eb253640 Zea mays HOM05D006038 ORTHO05D007547 4.1e-07 60.1 52 55.8
Zm00001eb369920 Zea mays HOM05D006038 ORTHO05D007547 5.4e-07 59.7 51 54.9


User provided reference genes

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