Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc14g0000950 Simmondsia chinensis HOM05D006346 ORTHO05D007910 0.0e+00 1233.4 622 100.0
Dinv42829 Davidia involucrata HOM05D006346 ORTHO05D007910 5.0e-255 884.4 577 77.3
Dinv43271 Davidia involucrata HOM05D006346 ORTHO05D007910 5.0e-255 884.4 577 77.3
AUR62028356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 3.7e-250 868.2 614 72.1
Hund08940 Selenicereus undatus HOM05D006346 ORTHO05D007910 2.4e-249 865.5 630 71.4
EL10Ac8g18923 Beta vulgaris HOM05D006346 ORTHO05D007910 3.2e-249 865.1 626 72.5
Hma1.2p1_0028F.1_g017690 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 1.3e-247 859.8 608 72.7
Lj9A719T56 Lonicera japonica HOM05D006346 ORTHO05D007910 1.9e-246 855.9 597 72.9
CSS0042716 Camellia sinensis var. sinensis HOM05D006346 ORTHO05D007910 2.8e-245 852.0 620 71.0
Atru.chr7.350 Acer truncatum HOM05D006346 ORTHO05D007910 8.9e-244 847.0 603 72.6
Ciclev10007623m.g Citrus clementina HOM05D006346 ORTHO05D007910 1.1e-241 840.1 578 73.0
QL02p093888 Quercus lobata HOM05D006346 ORTHO05D007910 2.4e-241 839.0 611 71.2
Cfa020798 Carpinus fangiana HOM05D006346 ORTHO05D007910 2.7e-240 835.5 617 70.8
Potri.018G103700 Populus trichocarpa HOM05D006346 ORTHO05D007910 3.9e-239 831.6 611 69.2
CiPaw.15G165500 Carya illinoinensis HOM05D006346 ORTHO05D007910 1.9e-238 829.3 608 70.9
Prupe.7G265700 Prunus persica HOM05D006346 ORTHO05D007910 5.6e-238 827.8 595 71.4
Thecc.09G152100 Theobroma cacao HOM05D006346 ORTHO05D007910 7.3e-238 827.4 598 70.2
Nitab4.5_0003551g0040 Nicotiana tabacum HOM05D006346 ORTHO05D007910 1.6e-237 826.2 601 70.7
CANSAT11G2498 Cannabis sativa HOM05D006346 ORTHO05D007910 3.1e-236 822.0 591 70.7
MD02G1005300 Malus domestica HOM05D006346 ORTHO05D007910 3.1e-236 822.0 596 70.5
Sopen07g001980 Solanum pennellii HOM05D006346 ORTHO05D007910 6.9e-236 820.8 617 69.2
Nn8g39991 Nelumbo nucifera HOM05D006346 ORTHO05D007910 1.2e-235 820.1 619 69.0
Haze_19155 Corylus avellana HOM05D006346 ORTHO05D007910 2.6e-235 818.9 625 68.8
PGR102G0252 Punica granatum HOM05D006346 ORTHO05D007910 3.4e-235 818.5 613 69.2
Aqoxy7G03359 Aquilegia oxysepala HOM05D006346 ORTHO05D007910 1.3e-234 816.6 576 73.4
FAN28G1995 Fragaria x ananassa HOM05D006346 ORTHO05D007910 8.4e-234 813.9 597 69.3
RcHm_v2.0_Chr2g0085271 Rosa chinensis HOM05D006346 ORTHO05D007910 1.4e-233 813.1 613 68.5
FvH4_1g00650 Fragaria vesca HOM05D006346 ORTHO05D007910 3.2e-233 812.0 597 69.0
DCAR_019414 Daucus carota HOM05D006346 ORTHO05D007910 2.7e-232 808.9 612 67.3
COL.COLO4_23953 Corchorus olitorius HOM05D006346 ORTHO05D007910 7.8e-232 807.4 598 69.1
Gohir.A04G059826 Gossypium hirsutum HOM05D006346 ORTHO05D007910 7.8e-232 807.4 610 67.7
FAN26G0534 Fragaria x ananassa HOM05D006346 ORTHO05D007910 2.3e-231 805.8 571 70.9
PSO782G0769 Papaver somniferum HOM05D006346 ORTHO05D007910 3.0e-231 805.4 610 68.0
Gorai.012G099000 Gossypium raimondii HOM05D006346 ORTHO05D007910 3.9e-231 805.1 602 68.1
HanXRQChr10g0313691 Helianthus annuus HOM05D006346 ORTHO05D007910 5.1e-231 804.7 597 69.3
TWI34G0405 Tripterygium wilfordii HOM05D006346 ORTHO05D007910 5.1e-231 804.7 601 68.7
Rhsim01G0026600 Rhododendron simsii HOM05D006346 ORTHO05D007910 6.6e-231 804.3 602 68.9
Sabra18G0089100 Salix brachista HOM05D006346 ORTHO05D007910 1.1e-230 803.5 654 64.1
PSO063G0785 Papaver somniferum HOM05D006346 ORTHO05D007910 1.5e-230 803.1 610 67.9
CAN.G160.15 Capsicum annuum HOM05D006346 ORTHO05D007910 3.3e-230 802.0 580 71.7
Gohir.D04G088700 Gossypium hirsutum HOM05D006346 ORTHO05D007910 3.3e-230 802.0 602 68.1
THA.LOC104803912 Tarenaya hassleriana HOM05D006346 ORTHO05D007910 1.3e-229 800.0 592 70.1
vmacro16782 Vaccinium macrocarpon HOM05D006346 ORTHO05D007910 1.6e-229 799.7 576 70.7
ECA234G1139 Erigeron canadensis HOM05D006346 ORTHO05D007910 2.1e-229 799.3 576 69.3
Sed0021167 Sechium edule HOM05D006346 ORTHO05D007910 1.1e-228 797.0 605 68.6
FAN23G2716 Fragaria x ananassa HOM05D006346 ORTHO05D007910 1.5e-227 793.1 628 65.8
CsaV3_2G007650 Cucumis sativus L. HOM05D006346 ORTHO05D007910 3.4e-227 792.0 613 67.9
MSTRG.6156 Avicennia marina HOM05D006346 ORTHO05D007910 5.8e-227 791.2 613 67.0
Lalb_Chr08g0234231 Lupinus albus HOM05D006346 ORTHO05D007910 9.9e-227 790.4 616 67.0
BraA03t15070Z Brassica rapa HOM05D006346 ORTHO05D007910 2.2e-226 789.3 615 67.2
Cc06_g14630 Coffea canephora HOM05D006346 ORTHO05D007910 1.4e-225 786.6 602 67.6
Lj6g0013256 Lotus japonicus HOM05D006346 ORTHO05D007910 3.2e-225 785.4 587 68.5
A03p60280 Brassica napus HOM05D006346 ORTHO05D007910 4.2e-225 785.0 617 66.6
Glyma.07G102300 Glycine max HOM05D006346 ORTHO05D007910 5.4e-225 784.6 583 68.1
BcaNung01563 Brassica carinata HOM05D006346 ORTHO05D007910 7.1e-225 784.3 617 66.6
Aa31LG2G19630 Aethionema arabicum HOM05D006346 ORTHO05D007910 9.3e-225 783.9 614 66.9
BolC7t46278H Brassica oleracea HOM05D006346 ORTHO05D007910 9.3e-225 783.9 613 66.7
Nitab4.5_0002611g0100 Nicotiana tabacum HOM05D006346 ORTHO05D007910 9.3e-225 783.9 613 68.0
C07p58190 Brassica napus HOM05D006346 ORTHO05D007910 2.7e-224 782.3 613 67.0
arahy.Tifrunner.gnm1.ann1.VMKR8Z Arachis hypogaea HOM05D006346 ORTHO05D007910 3.5e-224 781.9 581 68.8
GSVIVG01008451001 Vitis vinifera HOM05D006346 ORTHO05D007910 4.6e-224 781.6 603 68.7
Thhalv10024548m.g Eutrema salsugineum HOM05D006346 ORTHO05D007910 7.9e-224 780.8 616 65.6
BcaNung02744 Brassica carinata HOM05D006346 ORTHO05D007910 1.0e-223 780.4 613 66.9
AT4G30720 Arabidopsis thaliana HOM05D006346 ORTHO05D007910 3.0e-223 778.9 614 66.4
Carub.0007s0978 Capsella rubella HOM05D006346 ORTHO05D007910 5.1e-223 778.1 589 67.9
AL7G21400 Arabidopsis lyrata HOM05D006346 ORTHO05D007910 1.1e-222 776.9 609 66.2
Lsat_1_v5_gn_5_89421 Lactuca sativa HOM05D006346 ORTHO05D007910 1.5e-222 776.5 600 67.7
arahy.Tifrunner.gnm1.ann1.ID3JIZ Arachis hypogaea HOM05D006346 ORTHO05D007910 1.9e-222 776.2 613 65.9
Phvul.003G072700 Phaseolus vulgaris HOM05D006346 ORTHO05D007910 2.8e-221 772.3 620 64.5
ClCG02G014350 Citrullus lanatus HOM05D006346 ORTHO05D007910 4.8e-221 771.5 599 67.3
Sp7g28630 Schrenkiella parvula HOM05D006346 ORTHO05D007910 2.4e-220 769.2 619 65.6
Medtr8g467050 Medicago truncatula HOM05D006346 ORTHO05D007910 3.1e-220 768.8 581 68.2
Manes.14G142800 Manihot esculenta HOM05D006346 ORTHO05D007910 3.4e-219 765.4 576 68.8
Migut.J01382 Erythranthe guttata HOM05D006346 ORTHO05D007910 4.9e-218 761.5 614 65.1
Psat4g134640 Pisum sativum HOM05D006346 ORTHO05D007910 3.2e-217 758.8 581 67.3
SGA_v2.0_scaffold45G17017 Striga asiatica HOM05D006346 ORTHO05D007910 1.6e-216 756.5 611 65.0
MELO3C004121.2 Cucumis melo HOM05D006346 ORTHO05D007910 3.0e-215 752.3 632 64.1
Os05g0411200 Oryza sativa ssp. japonica HOM05D006346 ORTHO05D007910 3.0e-215 752.3 582 65.6
HPP92_020605 Vanilla planifolia HOM05D006346 ORTHO05D007910 4.0e-212 741.9 614 63.0
Oeu052219.3 Olea europaea HOM05D006346 ORTHO05D007910 1.2e-211 740.3 628 62.9
Zm00001eb288040 Zea mays HOM05D006346 ORTHO05D007910 5.8e-211 738.0 637 60.3
Ah.09g228750 Amaranthus hybridus HOM05D006346 ORTHO05D007910 1.9e-209 733.0 607 63.4
Ca_22901_v3 Cicer arietinum L. HOM05D006346 ORTHO05D007910 3.2e-209 732.3 580 65.7
Actinidia38309 Actinidia chinensis HOM05D006346 ORTHO05D007910 1.3e-207 726.9 510 71.8
Solyc07g005870.3 Solanum lycopersicum HOM05D006346 ORTHO05D007910 1.3e-202 710.3 617 62.9
CDE12G0948 Ceratophyllum demersum HOM05D006346 ORTHO05D007910 1.7e-202 709.9 584 64.9
Peaxi162Scf00401g00218 Petunia axillaris HOM05D006346 ORTHO05D007910 4.3e-198 695.3 612 62.7
ATR0739G030 Amborella trichopoda HOM05D006346 ORTHO05D007910 5.3e-196 688.3 502 67.9
SalBow1G6401 Salvia bowleyana HOM05D006346 ORTHO05D007910 6.5e-186 654.8 482 69.1
unitig_37.g12649 Utricularia gibba HOM05D006346 ORTHO05D007910 1.4e-180 637.1 547 61.8
Hma1.2p1_0028F.1_g017700 Hydrangea macrophylla HOM05D006346 ORTHO05D007910 1.6e-179 633.6 423 75.9
TAR383G0381 Trochodendron aralioides HOM05D006346 ORTHO05D007910 2.6e-158 563.1 415 71.1
TPR.G10032 Trifolium pratense HOM05D006346 ORTHO05D007910 6.6e-154 548.5 1158 34.5
SMO146G0018 Selaginella moellendorffii HOM05D006346 ORTHO05D007910 1.1e-153 547.7 555 52.4
Pp3c23_14180 Physcomitrium patens HOM05D006346 ORTHO05D007910 1.5e-153 547.4 555 53.3
AagrBONN_evm.TU.Sc2ySwM_344.1120 Anthoceros agrestis HOM05D006346 ORTHO05D007910 3.3e-153 546.2 578 51.7
Mapoly0021s0085 Marchantia polymorpha HOM05D006346 ORTHO05D007910 9.5e-153 544.7 588 50.5
Cpa.g.sc46.182 Carica papaya HOM05D006346 ORTHO05D007910 3.9e-130 469.5 308 75.3
Eucgr.C02507 Eucalyptus grandis HOM05D006346 ORTHO05D007910 3.8e-125 453.0 330 69.1
PRCOL_00000449 Prasinoderma coloniale HOM05D006346 ORTHO05D007910 4.0e-111 406.4 551 43.4
Glyma.04G155100 Glycine max HOM05D006346 ORTHO05D007910 9.0e-111 405.2 309 64.4
AUR62025356 Chenopodium quinoa HOM05D006346 ORTHO05D007910 8.4e-109 398.7 313 69.0
Cre17.g744997 Chlamydomonas reinhardtii HOM05D006346 ORTHO05D007910 2.1e-107 394.0 666 39.5
MCO14G279 Micromonas commoda HOM05D006346 ORTHO05D007910 7.9e-107 392.1 413 48.9
Eucgr.C02508 Eucalyptus grandis HOM05D006346 ORTHO05D007910 1.6e-99 367.9 299 65.9
CAN.G160.19 Capsicum annuum HOM05D006346 ORTHO05D007910 3.2e-92 343.6 461 47.1
Cpa.g.sc46.183 Carica papaya HOM05D006346 ORTHO05D007910 5.0e-85 319.7 266 65.4
CARHR238600 Cardamine hirsuta HOM05D006346 ORTHO05D007910 7.7e-78 295.8 258 64.0
VMungo0251G1020 Vigna mungo HOM05D006346 ORTHO05D007910 1.4e-66 258.5 181 70.2
TAR383G0466 Trochodendron aralioides HOM05D006346 ORTHO05D007910 8.2e-56 222.6 136 80.9
Actinidia24372 Actinidia chinensis HOM05D006346 ORTHO05D007910 2.3e-50 204.5 623 30.2
Glyma.04G155150 Glycine max HOM05D006346 ORTHO05D007910 6.3e-48 196.4 144 67.4
PGSC0003DMG400011203 Solanum tuberosum HOM05D006346 ORTHO05D007910 2.1e-43 181.4 111 80.2
AUR62025355 Chenopodium quinoa HOM05D006346 ORTHO05D007910 1.7e-40 171.8 111 74.8
MD15G1149600 Malus domestica HOM05D006346 ORTHO05D007910 8.3e-32 142.9 165 50.3
SEGI_30041 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 8.3e-32 142.9 106 69.8
SalBow1G2918 Salvia bowleyana HOM05D006346 ORTHO05D007910 4.3e-28 130.6 101 65.3
Glyma.04G155200 Glycine max HOM05D006346 ORTHO05D007910 4.6e-22 110.5 103 60.2
SEGI_23921 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 1.6e-19 102.1 123 43.9
Rhsim01G0141500 Rhododendron simsii HOM05D006319 ORTHO05D007963 3.6e-19 100.9 109 56.0
FAN23G0300 Fragaria x ananassa HOM05D006346 ORTHO05D007910 8.9e-18 96.3 63 68.3
ECA238G2318 Erigeron canadensis HOM05D006346 ORTHO05D007910 2.6e-17 94.7 68 66.2
CAN.G1961.3 Capsicum annuum HOM05D006346 ORTHO05D007910 6.4e-16 90.1 57 78.9
HanXRQChr01g0001911 Helianthus annuus HOM05D006346 ORTHO05D007910 1.9e-15 88.6 51 76.5
SEGI_02941 Sequoiadendron giganteum HOM05D006346 ORTHO05D007910 1.0e-13 82.8 63 58.7
A05p44400 Brassica napus HOM05D034890 ORTHO05D100541 1.1e-10 72.8 76 50.0


User provided reference genes

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