Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc14g0000850 Simmondsia chinensis HOM05D005647 ORTHO05D006968 0.0e+00 1115.9 587 100.0
Hund18946 Selenicereus undatus HOM05D005647 ORTHO05D006968 7.6e-136 488.4 693 45.5
EL10Ac7g15937 Beta vulgaris HOM05D005647 ORTHO05D006968 1.8e-129 467.2 675 45.2
Ah.15g096320 Amaranthus hybridus HOM05D005647 ORTHO05D006968 4.2e-126 456.1 441 58.3
GSVIVG01025064001 Vitis vinifera HOM05D005647 ORTHO05D006968 5.5e-126 455.7 489 55.6
TAR623G0344 Trochodendron aralioides HOM05D005647 ORTHO05D006968 7.4e-123 445.3 344 67.4
AUR62001855 Chenopodium quinoa HOM05D005647 ORTHO05D006968 1.1e-121 441.4 472 54.7
Lj1A178T39 Lonicera japonica HOM05D005647 ORTHO05D006968 9.0e-121 438.3 540 49.4
Actinidia00810 Actinidia chinensis HOM05D005647 ORTHO05D006968 4.5e-120 436.0 393 61.3
Rhsim01G0223800 Rhododendron simsii HOM05D005647 ORTHO05D006968 1.7e-119 434.1 549 49.5
Thecc.09G331200 Theobroma cacao HOM05D005647 ORTHO05D006968 2.2e-119 433.7 529 48.6
CANSAT54G2414 Cannabis sativa HOM05D005647 ORTHO05D006968 3.8e-119 433.0 629 46.4
CiPaw.13G102300 Carya illinoinensis HOM05D005647 ORTHO05D006968 1.6e-117 427.6 358 63.1
PSO447G0260 Papaver somniferum HOM05D005647 ORTHO05D006968 1.6e-117 427.6 344 63.7
Nitab4.5_0000022g0330 Nicotiana tabacum HOM05D005647 ORTHO05D006968 6.1e-117 425.6 342 67.0
Nitab4.5_0008854g0020 Nicotiana tabacum HOM05D005647 ORTHO05D006968 1.8e-116 424.1 342 66.7
PSO541G4932 Papaver somniferum HOM05D005647 ORTHO05D006968 5.1e-116 422.5 340 63.2
Duzib150G0770 Durio zibethinus HOM05D005647 ORTHO05D006968 1.5e-115 421.0 354 62.4
MD11G1117900 Malus domestica HOM05D005647 ORTHO05D006968 7.4e-115 418.7 342 64.3
Sopen06g001190 Solanum pennellii HOM05D005647 ORTHO05D006968 7.4e-115 418.7 369 61.2
Cfa011418 Carpinus fangiana HOM05D005647 ORTHO05D006968 1.6e-114 417.5 423 56.7
Solyc06g005200.3 Solanum lycopersicum HOM05D005647 ORTHO05D006968 2.8e-114 416.8 358 62.6
RcHm_v2.0_Chr5g0062191 Rosa chinensis HOM05D005647 ORTHO05D006968 3.7e-114 416.4 342 65.2
Gohir.A05G099200 Gossypium hirsutum HOM05D005647 ORTHO05D006968 4.8e-114 416.0 450 52.7
Ciclev10027867m.g Citrus clementina HOM05D005647 ORTHO05D006968 6.3e-114 415.6 411 56.2
Cc01_g12040 Coffea canephora HOM05D005647 ORTHO05D006968 6.3e-114 415.6 482 51.7
PSO675G6613 Papaver somniferum HOM05D005647 ORTHO05D006968 6.3e-114 415.6 486 50.4
Gohir.D05G099100 Gossypium hirsutum HOM05D005647 ORTHO05D006968 4.1e-113 412.9 447 53.5
Gorai.009G103000 Gossypium raimondii HOM05D005647 ORTHO05D006968 4.1e-113 412.9 445 53.0
FvH4_3g34550 Fragaria vesca HOM05D005647 ORTHO05D006968 9.0e-113 411.8 342 65.2
COL.COLO4_18417 Corchorus olitorius HOM05D005647 ORTHO05D006968 1.5e-112 411.0 472 50.2
FAN11G0841 Fragaria x ananassa HOM05D005647 ORTHO05D006968 2.0e-112 410.6 342 64.9
FAN21G3075 Fragaria x ananassa HOM05D005647 ORTHO05D006968 3.4e-112 409.8 342 65.2
Manes.04G028600 Manihot esculenta HOM05D005647 ORTHO05D006968 3.4e-112 409.8 331 65.0
PGSC0003DMG400033668 Solanum tuberosum HOM05D005647 ORTHO05D006968 3.4e-112 409.8 440 55.5
Lsat_1_v5_gn_5_167021 Lactuca sativa HOM05D005647 ORTHO05D006968 5.9e-112 409.1 358 62.0
RcHm_v2.0_Chr4g0385531 Rosa chinensis HOM05D005647 ORTHO05D006968 5.9e-112 409.1 342 64.9
QL03p069904 Quercus lobata HOM05D005647 ORTHO05D006968 1.7e-111 407.5 354 62.1
FAN16G2614 Fragaria x ananassa HOM05D005647 ORTHO05D006968 2.9e-111 406.8 342 64.6
FAN25G1201 Fragaria x ananassa HOM05D005647 ORTHO05D006968 2.9e-111 406.8 342 64.6
SGA_v2.0_scaffold61G21232 Striga asiatica HOM05D005647 ORTHO05D006968 1.8e-108 397.5 343 61.5
MBI14_g34527_MAGBIO Magnolia biondii HOM05D005647 ORTHO05D006968 6.7e-108 395.6 326 63.2
Aqoxy4G03106 Aquilegia oxysepala HOM05D005647 ORTHO05D006968 2.0e-107 394.0 363 55.9
ClCG02G020580 Citrullus lanatus HOM05D005647 ORTHO05D006968 4.3e-107 392.9 341 60.1
Ca_01361_v3 Cicer arietinum L. HOM05D005647 ORTHO05D006968 1.3e-106 391.3 340 60.0
TWI75G1819 Tripterygium wilfordii HOM05D005647 ORTHO05D006968 2.2e-106 390.6 340 59.7
Haze_23998 Corylus avellana HOM05D005647 ORTHO05D006968 2.8e-106 390.2 423 54.8
Atru.chr3.3782 Acer truncatum HOM05D005647 ORTHO05D006968 3.7e-106 389.8 522 45.2
Potri.009G025800 Populus trichocarpa HOM05D005647 ORTHO05D006968 4.8e-106 389.4 445 50.6
Cpa.g.sc139.4 Carica papaya HOM05D005647 ORTHO05D006968 6.3e-106 389.0 341 61.9
Actinidia03769 Actinidia chinensis HOM05D005647 ORTHO05D006968 8.2e-106 388.7 360 60.8
CAN.G200.2 Capsicum annuum HOM05D005647 ORTHO05D006968 1.1e-105 388.3 317 64.4
MSTRG.21166 Avicennia marina HOM05D005647 ORTHO05D006968 2.4e-105 387.1 343 60.3
Eucgr.A02758 Eucalyptus grandis HOM05D005647 ORTHO05D006968 4.1e-105 386.3 341 60.1
Sed0021109 Sechium edule HOM05D005647 ORTHO05D006968 2.0e-104 384.0 340 58.2
PGR119G0370 Punica granatum HOM05D005647 ORTHO05D006968 5.9e-104 382.5 337 60.5
TPR.G17867 Trifolium pratense HOM05D005647 ORTHO05D006968 5.9e-104 382.5 340 57.6
DCAR_005295 Daucus carota HOM05D005647 ORTHO05D006968 1.0e-103 381.7 441 51.5
Aa31LG1G12110 Aethionema arabicum HOM05D005647 ORTHO05D006968 1.7e-103 380.9 483 48.0
vmacro14498 Vaccinium macrocarpon HOM05D005647 ORTHO05D006968 1.7e-103 380.9 397 54.4
AL8G36550 Arabidopsis lyrata HOM05D005647 ORTHO05D006968 2.2e-103 380.6 408 51.7
MELO3C025708.2 Cucumis melo HOM05D005647 ORTHO05D006968 6.5e-103 379.0 365 55.9
HanXRQChr14g0429211 Helianthus annuus HOM05D005647 ORTHO05D006968 6.5e-103 379.0 474 48.7
TPR.G11621 Trifolium pratense HOM05D005647 ORTHO05D006968 6.5e-103 379.0 340 57.4
Phvul.L002619 Phaseolus vulgaris HOM05D005647 ORTHO05D006968 8.5e-103 378.6 341 58.9
AT5G59980 Arabidopsis thaliana HOM05D005647 ORTHO05D006968 2.5e-102 377.1 472 47.9
Prupe.6G088000 Prunus persica HOM05D005647 ORTHO05D006968 2.5e-102 377.1 297 65.0
Carub.0004s0912 Capsella rubella HOM05D005647 ORTHO05D006968 4.2e-102 376.3 408 52.0
Migut.D02155 Erythranthe guttata HOM05D005647 ORTHO05D006968 9.4e-102 375.2 608 42.1
Psat5g282040 Pisum sativum HOM05D005647 ORTHO05D006968 2.7e-101 373.6 340 56.5
THA.LOC104809599 Tarenaya hassleriana HOM05D005647 ORTHO05D006968 4.7e-101 372.9 427 50.1
Glyma.13G196800 Glycine max HOM05D005647 ORTHO05D006968 7.9e-101 372.1 600 41.8
Lalb_Chr24g0394311 Lupinus albus HOM05D005647 ORTHO05D006968 1.8e-100 370.9 356 55.3
VMungo1080G1709 Vigna mungo HOM05D005647 ORTHO05D006968 3.0e-100 370.2 341 57.8
Lj3g0017565 Lotus japonicus HOM05D005647 ORTHO05D006968 1.5e-99 367.9 455 48.1
Peaxi162Scf00006g01310 Petunia axillaris HOM05D005647 ORTHO05D006968 2.0e-99 367.5 341 59.8
unitig_736.g22430 Utricularia gibba HOM05D005647 ORTHO05D006968 7.4e-99 365.5 435 48.7
ECA248G2619 Erigeron canadensis HOM05D005647 ORTHO05D006968 1.7e-98 364.4 509 46.0
Medtr2g096090 Medicago truncatula HOM05D005647 ORTHO05D006968 4.8e-98 362.8 415 49.4
CDE08G0081 Ceratophyllum demersum HOM05D005647 ORTHO05D006968 2.6e-96 357.1 350 54.9
CDE02G4018 Ceratophyllum demersum HOM05D005647 ORTHO05D006968 5.0e-95 352.8 319 57.7
Aqoxy4G03104_Aqoxy4G03103 Aquilegia oxysepala HOM05D005647 ORTHO05D006968 6.5e-95 352.4 343 55.4
Sabra09G0017200 Salix brachista HOM05D005647 ORTHO05D000187 1.5e-94 351.3 402 51.5
BcaB05g22600 Brassica carinata HOM05D005647 ORTHO05D006968 4.2e-94 349.7 453 48.1
Thhalv10012856m.g Eutrema salsugineum HOM05D005647 ORTHO05D006968 5.5e-94 349.4 486 45.3
BolC2t07297H Brassica oleracea HOM05D005647 ORTHO05D006968 1.2e-93 348.2 483 44.9
Oeu058515.3 Olea europaea HOM05D005647 ORTHO05D006968 1.2e-93 348.2 486 45.7
SalBow3G2669 Salvia bowleyana HOM05D005647 ORTHO05D006968 1.6e-93 347.8 378 51.9
SalBow3G1239 Salvia bowleyana HOM05D005647 ORTHO05D006968 2.1e-93 347.4 378 51.9
C02p11970 Brassica napus HOM05D005647 ORTHO05D006968 3.6e-93 346.7 484 45.2
BraA02t05750Z Brassica rapa HOM05D005647 ORTHO05D006968 3.6e-93 346.7 484 45.2
A02p06680 Brassica napus HOM05D005647 ORTHO05D006968 8.0e-93 345.5 534 41.9
Aa31LG5G21920 Aethionema arabicum HOM05D005647 ORTHO05D006968 2.3e-92 344.0 312 59.6
ATR0787G117 Amborella trichopoda HOM05D005647 ORTHO05D006968 3.3e-91 340.1 308 56.2
BraA10t43800Z Brassica rapa HOM05D005647 ORTHO05D006968 1.3e-90 338.2 350 53.4
BcaB08g36205 Brassica carinata HOM05D005647 ORTHO05D006968 1.7e-90 337.8 350 53.7
THA.LOC104813123 Tarenaya hassleriana HOM05D005647 ORTHO05D006968 2.8e-90 337.0 353 52.7
A10p17190 Brassica napus HOM05D005647 ORTHO05D006968 1.1e-89 335.1 350 53.4
arahy.Tifrunner.gnm1.ann1.7X2355 Arachis hypogaea HOM05D005647 ORTHO05D006968 5.3e-89 332.8 341 52.8
Sp6g21650 Schrenkiella parvula HOM05D005647 ORTHO05D006968 7.0e-89 332.4 470 44.9
BcaC04g19653 Brassica carinata HOM05D005647 ORTHO05D006968 1.0e-87 328.6 485 44.1
BolC9t58115H Brassica oleracea HOM05D005647 ORTHO05D006968 1.0e-87 328.6 485 44.1
arahy.Tifrunner.gnm1.ann1.W04KXW Arachis hypogaea HOM05D005647 ORTHO05D006968 1.3e-87 328.2 341 52.5
C09p52480 Brassica napus HOM05D005647 ORTHO05D006968 2.9e-87 327.0 489 44.0
arahy.Tifrunner.gnm1.ann1.S4SLQI Arachis hypogaea HOM05D005647 ORTHO05D006968 7.5e-83 312.4 632 36.9
AUR62009649 Chenopodium quinoa HOM05D005647 ORTHO05D006968 1.0e-79 302.0 584 38.7
arahy.Tifrunner.gnm1.ann1.ZDAZ4C Arachis hypogaea HOM05D005647 ORTHO05D006968 1.5e-78 298.1 632 36.2
Nn2g13828 Nelumbo nucifera HOM05D005647 ORTHO05D006968 8.6e-71 272.3 206 66.5
Gorai.013G129300 Gossypium raimondii HOM05D005647 ORTHO05D006968 1.5e-70 271.6 278 54.7
Pp3c23_18130 Physcomitrium patens HOM05D005647 ORTHO05D006968 6.6e-63 246.1 269 46.1
VMungo1127G1784 Vigna mungo HOM05D005647 ORTHO05D006968 1.0e-60 238.8 206 60.7
Mapoly0041s0094 Marchantia polymorpha HOM05D005647 ORTHO05D006968 1.7e-58 231.5 355 36.9
SEGI_32841 Sequoiadendron giganteum HOM05D005647 ORTHO05D006968 1.6e-56 224.9 236 48.7
Os12g0175900 Oryza sativa ssp. japonica HOM05D005647 ORTHO05D006968 6.0e-56 223.0 306 45.1
Zm00001eb163100 Zea mays HOM05D005647 ORTHO05D006968 1.4e-49 201.8 325 42.2
CsaV3_6G022020 Cucumis sativus L. HOM05D005647 ORTHO05D006968 1.6e-45 188.3 163 58.9
Aqoxy4G01384 Aquilegia oxysepala HOM05D005647 ORTHO05D006968 1.7e-34 151.8 113 65.5
VMungo1127G0608 Vigna mungo HOM05D005647 ORTHO05D006968 9.6e-30 136.0 142 50.0
VMungo1127G1495 Vigna mungo HOM05D005647 ORTHO05D006968 3.1e-28 131.0 149 51.0
MBI03_g45445_MAGBIO Magnolia biondii HOM05D005647 ORTHO05D006968 1.3e-26 125.6 122 54.9
Lsat_1_v5_gn_5_100621 Lactuca sativa HOM05D005647 ORTHO05D006968 1.6e-24 118.6 144 47.2
Dinv32824 Davidia involucrata HOM05D005647 ORTHO05D006968 2.1e-24 118.2 316 32.9
EL10Ac9g22529 Beta vulgaris HOM05D005647 ORTHO05D006968 1.3e-23 115.5 84 67.9
CARHR273620 Cardamine hirsuta HOM05D005647 ORTHO05D006968 3.9e-23 114.0 258 32.9
SMO348G0064 Selaginella moellendorffii HOM05D005647 ORTHO05D006968 4.3e-22 110.5 126 42.9
Cre02.g088050 Chlamydomonas reinhardtii HOM05D005647 ORTHO05D006968 7.4e-22 109.8 282 28.0
SEGI_06158 Sequoiadendron giganteum HOM05D005647 ORTHO05D006968 4.8e-21 107.1 106 52.8
QL03p025644 Quercus lobata HOM05D005647 ORTHO05D006968 1.8e-15 88.6 61 70.5
MCO02G042 Micromonas commoda HOM05D005647 ORTHO05D006968 4.3e-14 84.0 262 27.5
Gohir.D11G155700 Gossypium hirsutum HOM05D001229 ORTHO05D011852 8.2e-13 79.7 95 44.2
Gorai.007G165900 Gossypium raimondii HOM05D001229 ORTHO05D011852 8.2e-13 79.7 95 44.2
MBI14_g07932_MAGBIO Magnolia biondii HOM05D002922 ORTHO05D006968 2.4e-12 78.2 131 41.2
MBI10_g46876_MAGBIO Magnolia biondii HOM05D005647 ORTHO05D006968 6.9e-12 76.6 81 46.9


User provided reference genes

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