Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc13g0010870 Simmondsia chinensis HOM05D003663 ORTHO05D005327 3.7e-127 458.4 255 100.0
Aqoxy3G02161 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 1.8e-49 200.3 176 60.2
AUR62002065 Chenopodium quinoa HOM05D003663 ORTHO05D005327 8.9e-49 198.0 233 52.8
EL10Ac3g05074 Beta vulgaris HOM05D003663 ORTHO05D005327 1.5e-48 197.2 171 59.6
Sabra19G0059300 Salix brachista HOM05D003663 ORTHO05D005327 3.2e-46 189.5 257 45.9
TAR374G1477 Trochodendron aralioides HOM05D003663 ORTHO05D005327 3.2e-46 189.5 181 58.0
Ah.13g072750 Amaranthus hybridus HOM05D003663 ORTHO05D005327 4.1e-46 189.1 252 47.6
Glyma.17G149700 Glycine max HOM05D003663 ORTHO05D005327 2.1e-45 186.8 174 57.5
Oeu060390.1 Olea europaea HOM05D002083 ORTHO05D000332 3.5e-45 186.0 163 57.1
CSS0037566 Camellia sinensis var. sinensis HOM05D003663 ORTHO05D005327 7.8e-45 184.9 174 59.8
Oeu027885.1 Olea europaea HOM05D003663 ORTHO05D005327 7.8e-45 184.9 141 61.7
Lalb_Chr05g0220821 Lupinus albus HOM05D003663 ORTHO05D005327 1.3e-44 184.1 151 63.6
Phvul.003G226500 Phaseolus vulgaris HOM05D003663 ORTHO05D005327 5.1e-44 182.2 184 55.4
CiPaw.06G032900 Carya illinoinensis HOM05D003663 ORTHO05D005327 1.9e-43 180.3 181 55.2
MBI04_g20973_MAGBIO Magnolia biondii HOM05D003663 ORTHO05D005327 1.9e-43 180.3 180 55.6
Nn3g19378 Nelumbo nucifera HOM05D003663 ORTHO05D005327 1.9e-43 180.3 178 55.6
Cfa016035 Carpinus fangiana HOM05D003663 ORTHO05D005327 2.5e-43 179.9 180 57.2
Duzib177G0557 Durio zibethinus HOM05D003663 ORTHO05D005327 2.5e-43 179.9 217 49.8
VMungo0251G1526 Vigna mungo HOM05D003663 ORTHO05D005327 2.5e-43 179.9 180 58.3
Medtr4g099150 Medicago truncatula HOM05D003663 ORTHO05D005327 4.3e-43 179.1 130 69.2
Manes.09G126900 Manihot esculenta HOM05D003663 ORTHO05D005327 7.3e-43 178.3 165 57.0
QL09p023778 Quercus lobata HOM05D003663 ORTHO05D005327 1.2e-42 177.6 174 59.2
Haze_00422 Corylus avellana HOM05D003663 ORTHO05D005327 1.6e-42 177.2 218 52.8
Hma1.2p1_1680F.1_g297170 Hydrangea macrophylla HOM05D003663 ORTHO05D005327 2.8e-42 176.4 185 53.0
Lj4g0026545 Lotus japonicus HOM05D003663 ORTHO05D005327 3.6e-42 176.0 159 59.1
Rhsim09G0213000 Rhododendron simsii HOM05D003663 ORTHO05D005327 3.6e-42 176.0 253 44.3
vmacro22176 Vaccinium macrocarpon HOM05D003663 ORTHO05D005327 4.7e-42 175.6 180 55.0
SalBow2G0094 Salvia bowleyana HOM05D003663 ORTHO05D005327 6.2e-42 175.3 154 56.5
TWI34G0428 Tripterygium wilfordii HOM05D003663 ORTHO05D005327 6.2e-42 175.3 168 58.9
Duzib106G1874 Durio zibethinus HOM05D003663 ORTHO05D005327 8.1e-42 174.9 173 56.6
TPR.G17125 Trifolium pratense HOM05D003663 ORTHO05D005327 8.1e-42 174.9 146 63.0
Peaxi162Scf00815g00311 Petunia axillaris HOM05D003663 ORTHO05D005327 1.4e-41 174.1 160 51.9
PSO063G6858 Papaver somniferum HOM05D003663 ORTHO05D005327 2.4e-41 173.3 172 51.7
Potri.019G049600 Populus trichocarpa HOM05D003663 ORTHO05D005327 2.4e-41 173.3 251 45.4
PSO782G5365 Papaver somniferum HOM05D003663 ORTHO05D005327 6.8e-41 171.8 172 51.7
Psat4g076520 Pisum sativum HOM05D003663 ORTHO05D005327 8.9e-41 171.4 156 60.3
Lj3P887T57 Lonicera japonica HOM05D003663 ORTHO05D005327 2.6e-40 169.9 201 47.3
Nitab4.5_0001762g0070 Nicotiana tabacum HOM05D003663 ORTHO05D005327 5.8e-40 168.7 151 55.0
SGA_v2.0_scaffold50G18444 Striga asiatica HOM05D003663 ORTHO05D005327 4.9e-39 165.6 171 50.3
Migut.F00942 Erythranthe guttata HOM05D003663 ORTHO05D005327 8.4e-39 164.9 167 52.1
PGR142G2930 Punica granatum HOM05D003663 ORTHO05D005327 8.4e-39 164.9 161 52.8
Nitab4.5_0000021g0580 Nicotiana tabacum HOM05D003663 ORTHO05D005327 1.9e-38 163.7 168 50.6
CANSAT21G0248 Cannabis sativa HOM05D003663 ORTHO05D005327 3.2e-38 162.9 179 55.9
COL.COLO4_06064 Corchorus olitorius HOM05D003663 ORTHO05D005327 4.2e-38 162.5 167 55.1
Gorai.007G348900 Gossypium raimondii HOM05D003663 ORTHO05D005327 5.4e-38 162.2 135 60.7
Rhsim03G0221600 Rhododendron simsii HOM05D003663 ORTHO05D005327 5.4e-38 162.2 155 54.2
Cpa.g.sc504.5 Carica papaya HOM05D003663 ORTHO05D005327 2.1e-37 160.2 137 58.4
Gohir.D11G318900 Gossypium hirsutum HOM05D003663 ORTHO05D005327 2.7e-37 159.8 167 53.3
CAN.G65.131 Capsicum annuum HOM05D003663 ORTHO05D005327 3.5e-37 159.5 251 39.0
Gohir.A11G303600 Gossypium hirsutum HOM05D003663 ORTHO05D005327 3.5e-37 159.5 167 52.7
Lsat_1_v5_gn_2_136720 Lactuca sativa HOM05D003663 ORTHO05D005327 3.5e-37 159.5 169 48.5
HanXRQChr14g0462981 Helianthus annuus HOM05D003663 ORTHO05D005327 1.7e-36 157.1 173 46.8
Eucgr.K00086 Eucalyptus grandis HOM05D003663 ORTHO05D005327 3.0e-36 156.4 249 43.4
Duzib128G0448 Durio zibethinus HOM05D003663 ORTHO05D005327 5.1e-36 155.6 157 56.1
THA.LOC104827213 Tarenaya hassleriana HOM05D003663 ORTHO05D005327 8.7e-36 154.8 179 48.6
Ciclev10021912m.g Citrus clementina HOM05D003663 ORTHO05D005327 1.1e-35 154.5 267 39.7
BcaC03g18525 Brassica carinata HOM05D003663 ORTHO05D005327 2.5e-35 153.3 156 56.4
C02p08670 Brassica napus HOM05D003663 ORTHO05D005327 2.5e-35 153.3 156 56.4
BraA02t05351Z Brassica rapa HOM05D003663 ORTHO05D005327 3.3e-35 152.9 157 57.3
A02p03870 Brassica napus HOM05D003663 ORTHO05D005327 5.6e-35 152.1 156 55.8
Sopen06g029160 Solanum pennellii HOM05D003663 ORTHO05D005327 7.3e-35 151.8 171 45.6
BcaNung00434 Brassica carinata HOM05D003663 ORTHO05D005327 9.6e-35 151.4 156 55.8
PGSC0003DMG400027034 Solanum tuberosum HOM05D003663 ORTHO05D005327 1.6e-34 150.6 179 45.8
Prupe.2G326500 Prunus persica HOM05D003663 ORTHO05D005327 2.8e-34 149.8 138 58.0
Sp6g27190 Schrenkiella parvula HOM05D003663 ORTHO05D005327 1.1e-33 147.9 228 40.4
Thhalv10014405m.g Eutrema salsugineum HOM05D003663 ORTHO05D005327 1.4e-33 147.5 144 55.6
BolC2t06783H Brassica oleracea HOM05D003663 ORTHO05D005327 1.8e-33 147.1 186 50.0
AT5G16920 Arabidopsis thaliana HOM05D003663 ORTHO05D005327 4.0e-33 146.0 156 53.2
ECA233G1163 Erigeron canadensis HOM05D003663 ORTHO05D005327 4.0e-33 146.0 180 44.4
Cc00_g28240 Coffea canephora HOM05D003663 ORTHO05D005327 5.8e-32 142.1 139 51.1
AL6G27920 Arabidopsis lyrata HOM05D003663 ORTHO05D005327 1.7e-31 140.6 182 48.9
Carub.0006s1513 Capsella rubella HOM05D003663 ORTHO05D005327 2.9e-31 139.8 181 47.0
CARHR196240 Cardamine hirsuta HOM05D003663 ORTHO05D005327 4.9e-31 139.0 166 50.6
DCAR_010543 Daucus carota HOM05D003663 ORTHO05D005327 1.4e-30 137.5 173 44.5
Os12g0233900 Oryza sativa ssp. japonica HOM05D003663 ORTHO05D005327 1.1e-27 127.9 153 42.5
Actinidia33794 Actinidia chinensis HOM05D003663 ORTHO05D005327 1.6e-26 124.0 112 53.6
ATR0829G139 Amborella trichopoda HOM05D003663 ORTHO05D005327 2.1e-26 123.6 252 35.7
VMungo0647G1338 Vigna mungo HOM05D003663 ORTHO05D005327 4.0e-25 119.4 167 44.3
LjContig00081g0009748 Lotus japonicus HOM05D003663 ORTHO05D005327 2.6e-24 116.7 170 41.2
Ca_06459_v3 Cicer arietinum L. HOM05D003663 ORTHO05D005327 3.4e-24 116.3 150 44.0
VMungo0540G0424 Vigna mungo HOM05D003663 ORTHO05D005327 3.4e-24 116.3 129 42.6
Thecc.05G213800 Theobroma cacao HOM05D003663 ORTHO05D005327 4.5e-24 115.9 217 38.7
Glyma.14G007200 Glycine max HOM05D003663 ORTHO05D005327 7.6e-24 115.2 165 42.4
arahy.Tifrunner.gnm1.ann1.5NF29Y Arachis hypogaea HOM05D003663 ORTHO05D005327 2.9e-23 113.2 128 43.8
arahy.Tifrunner.gnm1.ann1.CR9YGF Arachis hypogaea HOM05D003663 ORTHO05D005327 2.9e-23 113.2 128 43.8
Nn1g01862 Nelumbo nucifera HOM05D003663 ORTHO05D005327 2.9e-23 113.2 109 53.2
TPR.G10569 Trifolium pratense HOM05D003663 ORTHO05D005327 6.4e-23 112.1 128 43.0
Nn1g03229 Nelumbo nucifera HOM05D003663 ORTHO05D005327 1.9e-22 110.5 140 40.0
Psat2g004440 Pisum sativum HOM05D003663 ORTHO05D005327 1.9e-22 110.5 152 42.8
Hma1.2p1_1267F.1_g271530 Hydrangea macrophylla HOM05D003663 ORTHO05D005327 4.2e-22 109.4 167 38.9
Phvul.008G285700 Phaseolus vulgaris HOM05D003663 ORTHO05D005327 4.2e-22 109.4 168 42.3
Lalb_Chr16g0386341 Lupinus albus HOM05D003663 ORTHO05D005327 5.4e-22 109.0 101 59.4
Phvul.006G141400 Phaseolus vulgaris HOM05D003663 ORTHO05D005327 5.4e-22 109.0 129 41.1
Medtr5g097370 Medicago truncatula HOM05D003663 ORTHO05D005327 7.1e-22 108.6 152 42.1
ATR0624G116 Amborella trichopoda HOM05D003663 ORTHO05D005327 1.2e-21 107.8 173 37.0
Hma1.2p1_2614F.1_g325410 Hydrangea macrophylla HOM05D003663 ORTHO05D005327 1.2e-21 107.8 168 38.7
Lj6g0026147 Lotus japonicus HOM05D003663 ORTHO05D005327 1.6e-21 107.5 125 43.2
Prupe.4G006800 Prunus persica HOM05D003663 ORTHO05D005327 1.6e-21 107.5 125 41.6
Aqoxy3G02718 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 2.1e-21 107.1 149 38.3
Lalb_Chr20g0119391 Lupinus albus HOM05D003663 ORTHO05D005327 2.1e-21 107.1 129 40.3
TPR.G1287 Trifolium pratense HOM05D003663 ORTHO05D005327 2.1e-21 107.1 151 40.4
arahy.Tifrunner.gnm1.ann1.8QBK2E Arachis hypogaea HOM05D003663 ORTHO05D005327 4.6e-21 105.9 135 39.3
arahy.Tifrunner.gnm1.ann1.P7DY53 Arachis hypogaea HOM05D003663 ORTHO05D005327 4.6e-21 105.9 135 39.3
Sed0003500 Sechium edule HOM05D003663 ORTHO05D005327 7.9e-21 105.1 157 38.9
TAR627G0054 Trochodendron aralioides HOM05D003663 ORTHO05D005327 3.9e-20 102.8 167 37.7
Ca_00744_v3 Cicer arietinum L. HOM05D003663 ORTHO05D005327 5.1e-20 102.4 157 38.2
Glyma.09G012100 Glycine max HOM05D003663 ORTHO05D005327 8.7e-20 101.7 162 37.0
Lalb_Chr17g0349111 Lupinus albus HOM05D003663 ORTHO05D005327 8.7e-20 101.7 161 36.6
Psat1g178200 Pisum sativum HOM05D003663 ORTHO05D005327 8.7e-20 101.7 128 39.1
Sed0002316 Sechium edule HOM05D003663 ORTHO05D005327 8.7e-20 101.7 127 39.4
CsaV3_7G023690 Cucumis sativus L. HOM05D003663 ORTHO05D005327 1.5e-19 100.9 152 39.5
MELO3C024107.2 Cucumis melo HOM05D003663 ORTHO05D005327 3.3e-19 99.8 153 39.2
Aqoxy1G04228 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 4.3e-19 99.4 140 38.6
Actinidia34308 Actinidia chinensis HOM05D003663 ORTHO05D005327 5.6e-19 99.0 77 61.0
Sed0016160 Sechium edule HOM05D003663 ORTHO05D005327 3.7e-18 96.3 139 41.7
TWI38G0283 Tripterygium wilfordii HOM05D003663 ORTHO05D005327 3.7e-18 96.3 150 34.0
BcaC04g23626 Brassica carinata HOM05D003663 ORTHO05D005327 4.8e-18 95.9 163 34.4
MD09G1122000 Malus domestica HOM05D003663 ORTHO05D005327 6.2e-18 95.5 134 41.0
ClCG02G002710 Citrullus lanatus HOM05D003663 ORTHO05D005327 8.1e-18 95.1 152 36.2
BolC9t53556H Brassica oleracea HOM05D003663 ORTHO05D005327 1.1e-17 94.7 166 34.3
Aqoxy1G04227 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 1.4e-17 94.4 173 37.6
C09p06370 Brassica napus HOM05D003663 ORTHO05D005327 1.4e-17 94.4 163 33.7
TWI36G0551 Tripterygium wilfordii HOM05D003663 ORTHO05D005327 1.4e-17 94.4 161 36.0
MELO3C028604.2 Cucumis melo HOM05D003663 ORTHO05D005327 1.8e-17 94.0 161 37.9
Thhalv10005288m.g Eutrema salsugineum HOM05D003663 ORTHO05D005327 2.4e-17 93.6 135 37.0
FvH4_3g00560 Fragaria vesca HOM05D003663 ORTHO05D005327 2.4e-17 93.6 133 36.1
Eucgr.L03441 Eucalyptus grandis HOM05D003663 ORTHO05D005327 3.1e-17 93.2 117 41.0
A09p05770 Brassica napus HOM05D003663 ORTHO05D005327 4.0e-17 92.8 169 34.3
BraA09t36218Z Brassica rapa HOM05D003663 ORTHO05D005327 4.0e-17 92.8 169 34.3
ClCG01G010650 Citrullus lanatus HOM05D003663 ORTHO05D005327 4.0e-17 92.8 122 39.3
PGR142G2458 Punica granatum HOM05D003663 ORTHO05D005327 4.0e-17 92.8 139 37.4
FAN25G1738 Fragaria x ananassa HOM05D003663 ORTHO05D005327 5.3e-17 92.4 133 36.8
BcaB04g19727 Brassica carinata HOM05D003663 ORTHO05D005327 2.0e-16 90.5 168 33.3
Sed0020467 Sechium edule HOM05D003663 ORTHO05D005327 2.0e-16 90.5 121 38.0
PSO210G1796 Papaver somniferum HOM05D003663 ORTHO05D005327 4.5e-16 89.4 133 34.6
PSO302G0013 Papaver somniferum HOM05D003663 ORTHO05D005327 4.5e-16 89.4 133 34.6
Potri.006G016700 Populus trichocarpa HOM05D003663 ORTHO05D005327 5.8e-16 89.0 95 44.2
THA.LOC104826655 Tarenaya hassleriana HOM05D003663 ORTHO05D005327 1.7e-15 87.4 155 37.4
CARHR186960 Cardamine hirsuta HOM05D003663 ORTHO05D005327 6.5e-15 85.5 133 35.3
AT5G26730 Arabidopsis thaliana HOM05D003663 ORTHO05D005327 1.1e-14 84.7 133 33.1
Ciclev10017620m.g Citrus clementina HOM05D003663 ORTHO05D005327 1.9e-14 84.0 125 36.0
Aqoxy1G04229 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 3.2e-14 83.2 189 30.2
Carub.0006s2423 Capsella rubella HOM05D003663 ORTHO05D005327 9.3e-14 81.6 178 32.0
A06p36830 Brassica napus HOM05D003663 ORTHO05D005327 2.1e-13 80.5 174 32.2
BraA06t26609Z Brassica rapa HOM05D003663 ORTHO05D005327 2.1e-13 80.5 174 32.2
BcaNung02825 Brassica carinata HOM05D003663 ORTHO05D005327 2.7e-13 80.1 170 32.4
C07p41660 Brassica napus HOM05D003663 ORTHO05D005327 2.7e-13 80.1 170 32.4
BolC7t44701H Brassica oleracea HOM05D003663 ORTHO05D005327 2.7e-13 80.1 170 32.4
BcaNung03959 Brassica carinata HOM05D003663 ORTHO05D005327 4.6e-13 79.3 164 32.3
Sp2g21370 Schrenkiella parvula HOM05D003663 ORTHO05D005327 1.0e-12 78.2 114 35.1
AL6G38450 Arabidopsis lyrata HOM05D003663 ORTHO05D005327 1.3e-12 77.8 165 30.3
RcHm_v2.0_Chr2g0156681 Rosa chinensis HOM05D003663 ORTHO05D005327 3.9e-12 76.3 105 36.2
Actinidia08745 Actinidia chinensis HOM05D000074 ORTHO05D006801 3.3e-11 73.2 85 51.8
BcaB07g29963 Brassica carinata HOM05D003663 ORTHO05D005327 9.6e-11 71.6 90 38.9
CsaV3_7G002660 Cucumis sativus L. HOM05D003663 ORTHO05D005327 1.6e-10 70.9 103 39.8
Mapoly0095s0061 Marchantia polymorpha HOM05D005423 ORTHO05D006223 8.2e-10 68.6 145 30.3
BcaB04g19726 Brassica carinata HOM05D003663 ORTHO05D005327 1.1e-09 68.2 86 37.2
SMO290G0002 Selaginella moellendorffii HOM05D005423 ORTHO05D006223 5.3e-09 65.9 115 31.3
Glyma.02G305800 Glycine max HOM05D003663 ORTHO05D005327 9.0e-09 65.1 109 38.5
Medtr2g026520 Medicago truncatula HOM05D003663 ORTHO05D005327 9.0e-09 65.1 82 40.2
Potri.016G009000 Populus trichocarpa HOM05D003663 ORTHO05D005327 2.0e-08 63.9 60 50.0
A02p39370 Brassica napus HOM05D003663 ORTHO05D010021 2.6e-08 63.5 78 37.2
SMO220G0003 Selaginella moellendorffii HOM05D002232 ORTHO05D002323 2.6e-08 63.5 209 25.8
Sc04g0008360 Simmondsia chinensis HOM05D005423 ORTHO05D006223 2.5e-06 57.0 109 31.2
TAR636G0950 Trochodendron aralioides HOM05D005423 ORTHO05D006223 4.2e-06 56.2 178 24.7


User provided reference genes

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