Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc13g0009450 Simmondsia chinensis HOM05D005720 ORTHO05D006984 0.0e+00 1852.0 931 100.0
Hund11695 Selenicereus undatus HOM05D005720 ORTHO05D006984 7.6e-239 831.2 1005 50.1
EL10Ac3g05366 Beta vulgaris HOM05D005720 ORTHO05D006984 6.4e-238 828.2 992 49.0
AUR62031469 Chenopodium quinoa HOM05D005720 ORTHO05D006984 1.6e-233 813.5 991 48.3
Ah.07g206170 Amaranthus hybridus HOM05D005720 ORTHO05D006984 1.4e-213 747.3 991 46.5
Dinv28352 Davidia involucrata HOM05D005720 ORTHO05D006984 2.5e-202 709.9 1012 45.2
CiPaw.06G006200 Carya illinoinensis HOM05D005720 ORTHO05D006984 3.9e-195 686.0 1018 43.5
QL09p011597 Quercus lobata HOM05D005720 ORTHO05D006984 6.7e-195 685.3 1036 42.8
GSVIVG01028746001 Vitis vinifera HOM05D005720 ORTHO05D006984 1.0e-190 671.4 1019 44.0
AUR62021063 Chenopodium quinoa HOM05D005720 ORTHO05D006984 6.5e-190 668.7 996 43.2
MD07G1283200 Malus domestica HOM05D005720 ORTHO05D006984 1.1e-189 667.9 1016 41.9
Cfa016346 Carpinus fangiana HOM05D005720 ORTHO05D006984 2.5e-189 666.8 1023 42.3
MD01G1213400 Malus domestica HOM05D005720 ORTHO05D006984 1.1e-186 657.9 1019 42.2
Prupe.2G305400 Prunus persica HOM05D005720 ORTHO05D006984 9.7e-186 654.8 1017 42.0
TWI39G1277 Tripterygium wilfordii HOM05D005720 ORTHO05D006984 3.1e-184 649.8 1023 40.9
Thecc.03G190400 Theobroma cacao HOM05D005720 ORTHO05D006984 3.1e-176 623.2 1024 40.6
Potri.012G033800 Populus trichocarpa HOM05D005720 ORTHO05D006984 4.5e-175 619.4 1013 41.0
Manes.06G155900 Manihot esculenta HOM05D005720 ORTHO05D006984 2.9e-174 616.7 1023 40.4
Rhsim03G0197100 Rhododendron simsii HOM05D005720 ORTHO05D006984 7.2e-173 612.1 1017 41.5
Hma1.2p1_0142F.1_g064130 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 1.6e-172 610.9 1010 41.8
Duzib084G1243 Durio zibethinus HOM05D005720 ORTHO05D006984 1.0e-171 608.2 1018 40.7
Sabra12G0022900 Salix brachista HOM05D005720 ORTHO05D006984 1.8e-171 607.4 1015 40.7
FvH4_7g30790 Fragaria vesca HOM05D005720 ORTHO05D006984 3.4e-170 603.2 1016 40.3
FAN06G1427 Fragaria x ananassa HOM05D005720 ORTHO05D006984 9.8e-170 601.7 1023 40.0
FAN01G1865 Fragaria x ananassa HOM05D005720 ORTHO05D006984 1.3e-169 601.3 1018 40.0
FAN06G3446 Fragaria x ananassa HOM05D005720 ORTHO05D006984 1.3e-169 601.3 1020 40.1
FAN03G0014 Fragaria x ananassa HOM05D005720 ORTHO05D006984 4.9e-169 599.4 1017 40.6
Nn1g01775 Nelumbo nucifera HOM05D005720 ORTHO05D006984 8.3e-169 598.6 1026 39.7
COL.COLO4_24780 Corchorus olitorius HOM05D005720 ORTHO05D006984 4.5e-167 592.8 1078 38.5
Gorai.006G200000 Gossypium raimondii HOM05D005720 ORTHO05D006984 7.3e-165 585.5 999 40.6
Gohir.A09G183200 Gossypium hirsutum HOM05D005720 ORTHO05D006984 1.2e-164 584.7 1021 40.2
Gohir.D09G177900 Gossypium hirsutum HOM05D005720 ORTHO05D006984 5.7e-162 575.9 1021 39.6
Haze_00092 Corylus avellana HOM05D005720 ORTHO05D006984 4.1e-160 569.7 1025 39.1
Oeu037117.2 Olea europaea HOM05D005720 ORTHO05D006984 5.9e-159 565.8 1006 39.4
arahy.Tifrunner.gnm1.ann1.35A5BC Arachis hypogaea HOM05D005720 ORTHO05D006984 1.0e-158 565.1 1045 37.1
Actinidia08611 Actinidia chinensis HOM05D005720 ORTHO05D006984 3.9e-158 563.1 866 42.3
Cc02_g02050 Coffea canephora HOM05D005720 ORTHO05D006984 4.3e-157 559.7 998 38.8
FAN10G0387 Fragaria x ananassa HOM05D005720 ORTHO05D006984 4.7e-156 556.2 1006 38.7
TPR.G16464 Trifolium pratense HOM05D005720 ORTHO05D006984 4.0e-155 553.1 1006 39.1
Ca_27881_v3 Cicer arietinum L. HOM05D005720 ORTHO05D006984 6.8e-155 552.4 1002 39.5
MD01G1213200 Malus domestica HOM05D005720 ORTHO05D006984 4.4e-154 549.7 822 42.5
arahy.Tifrunner.gnm1.ann1.YA4Y9S Arachis hypogaea HOM05D005720 ORTHO05D006984 9.8e-154 548.5 1045 36.7
CsaV3_4G002370 Cucumis sativus L. HOM05D005720 ORTHO05D006984 1.1e-152 545.0 1022 38.5
TAR636G3648 Trochodendron aralioides HOM05D005720 ORTHO05D006984 1.0e-150 538.5 795 43.3
RcHm_v2.0_Chr1g0379731 Rosa chinensis HOM05D005720 ORTHO05D006984 5.0e-150 536.2 818 43.0
Migut.F00255 Erythranthe guttata HOM05D005720 ORTHO05D006984 7.3e-149 532.3 983 38.5
HanXRQChr01g0031161 Helianthus annuus HOM05D005720 ORTHO05D006984 9.5e-149 531.9 1000 37.7
HanXRQChr11g0353671 Helianthus annuus HOM05D005720 ORTHO05D006984 4.7e-148 529.6 994 38.7
THA.LOC104825125 Tarenaya hassleriana HOM05D005720 ORTHO05D006984 4.7e-148 529.6 1002 38.6
Lalb_Chr06g0161451 Lupinus albus HOM05D005720 ORTHO05D006984 8.1e-148 528.9 992 38.1
Aqoxy7G00210 Aquilegia oxysepala HOM05D005720 ORTHO05D006984 1.1e-147 528.5 1016 37.9
SalBow4G2908 Salvia bowleyana HOM05D005720 ORTHO05D006984 1.1e-147 528.5 982 38.7
MSTRG.27056 Avicennia marina HOM05D005720 ORTHO05D006984 5.2e-147 526.2 1005 37.6
MELO3C017804.2 Cucumis melo HOM05D005720 ORTHO05D006984 1.2e-146 525.0 988 38.3
SalBow4G2744 Salvia bowleyana HOM05D005720 ORTHO05D006984 1.2e-146 525.0 982 38.5
Solyc03g007550.4 Solanum lycopersicum HOM05D005720 ORTHO05D006984 3.4e-146 523.5 993 38.3
Nitab4.5_0000472g0110 Nicotiana tabacum HOM05D005720 ORTHO05D006984 5.8e-146 522.7 1015 38.4
Glyma.16G069100 Glycine max HOM05D005720 ORTHO05D006984 9.8e-146 521.9 1015 38.1
Sopen03g003510 Solanum pennellii HOM05D005720 ORTHO05D006984 1.1e-144 518.5 993 38.1
PSO384G4812 Papaver somniferum HOM05D005720 ORTHO05D006984 1.9e-144 517.7 1014 38.5
PSO135G0324 Papaver somniferum HOM05D005720 ORTHO05D006984 2.4e-144 517.3 1017 38.5
Lsat_1_v5_gn_1_45000 Lactuca sativa HOM05D005720 ORTHO05D006984 4.6e-143 513.1 998 38.4
MBI06_g04292_MAGBIO Magnolia biondii HOM05D005720 ORTHO05D006984 2.3e-142 510.8 1032 36.7
DCAR_010640 Daucus carota HOM05D005720 ORTHO05D006984 3.0e-142 510.4 1008 37.0
ECA248G2416 Erigeron canadensis HOM05D005720 ORTHO05D006984 1.9e-141 507.7 1006 38.1
Aa31LG3G9180 Aethionema arabicum HOM05D005720 ORTHO05D006984 7.3e-141 505.8 1007 37.5
Lj3g0007394 Lotus japonicus HOM05D005720 ORTHO05D006984 3.6e-140 503.4 1004 36.3
Cpa.g.sc3.32 Carica papaya HOM05D005720 ORTHO05D006984 2.3e-139 500.7 1019 36.1
Peaxi162Scf00904g00464 Petunia axillaris HOM05D005720 ORTHO05D006984 3.1e-139 500.4 1011 37.9
TAR629G0723 Trochodendron aralioides HOM05D005720 ORTHO05D006984 4.0e-139 500.0 784 40.8
Medtr8g058270 Medicago truncatula HOM05D005720 ORTHO05D006984 2.0e-138 497.7 973 37.8
Eucgr.K00315 Eucalyptus grandis HOM05D005720 ORTHO05D006984 1.7e-137 494.6 1031 36.0
FAN10G2558 Fragaria x ananassa HOM05D005720 ORTHO05D006984 8.4e-137 492.3 835 38.3
VMungo1127G0215 Vigna mungo HOM05D005720 ORTHO05D006984 1.2e-132 478.4 977 36.1
CAN.G108.10 Capsicum annuum HOM05D005720 ORTHO05D006984 2.6e-130 470.7 1006 36.7
Thhalv10012590m.g Eutrema salsugineum HOM05D005720 ORTHO05D006984 3.4e-130 470.3 1012 36.7
ClCG07G011830 Citrullus lanatus HOM05D005720 ORTHO05D006984 5.8e-130 469.5 1019 35.4
CARHR265920 Cardamine hirsuta HOM05D005720 ORTHO05D006984 7.6e-130 469.2 999 36.1
AL8G27450 Arabidopsis lyrata HOM05D005720 ORTHO05D006984 3.5e-127 460.3 1009 37.1
AT5G52950 Arabidopsis thaliana HOM05D005720 ORTHO05D006984 1.1e-125 455.3 1009 36.6
C09p42670 Brassica napus HOM05D005720 ORTHO05D006984 3.3e-125 453.8 1013 35.3
BolC9t57143H Brassica oleracea HOM05D005720 ORTHO05D006984 3.3e-125 453.8 1013 35.3
Psat4g140280 Pisum sativum HOM05D005720 ORTHO05D006984 3.3e-125 453.8 815 38.8
BraA02t06213Z Brassica rapa HOM05D005720 ORTHO05D006984 5.6e-125 453.0 1012 35.3
A02p11480 Brassica napus HOM05D005720 ORTHO05D006984 6.2e-124 449.5 1013 34.7
BcaC03g14481 Brassica carinata HOM05D005720 ORTHO05D006984 1.4e-123 448.4 1018 35.0
BolC2t08045H Brassica oleracea HOM05D005720 ORTHO05D006984 1.4e-123 448.4 1022 35.3
Nitab4.5_0001331g0120 Nicotiana tabacum HOM05D005720 ORTHO05D006984 2.4e-123 447.6 958 36.6
Carub.0008s1313 Capsella rubella HOM05D005720 ORTHO05D006984 9.0e-123 445.7 1018 36.1
Sp6g15110 Schrenkiella parvula HOM05D005720 ORTHO05D006984 1.5e-122 444.9 1013 34.8
C02p19150 Brassica napus HOM05D005720 ORTHO05D006984 5.8e-122 443.0 1022 35.1
SGA_v2.0_scaffold192G40596 Striga asiatica HOM05D005720 ORTHO05D006984 3.0e-118 430.6 949 35.3
unitig_747.g21855 Utricularia gibba HOM05D000121 ORTHO05D000102 4.3e-117 426.8 1025 34.0
Hma1.2p1_1891F.1_g306670 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 9.6e-117 425.6 875 37.6
SHI10811 Sapria himalayana HOM05D005720 ORTHO05D006984 1.1e-99 369.0 897 33.2
vmacro06588 Vaccinium macrocarpon HOM05D005720 ORTHO05D006984 1.8e-99 368.2 622 38.1
Phvul.011G167400 Phaseolus vulgaris HOM05D005720 ORTHO05D006984 2.9e-97 360.9 662 38.2
Hma1.2p1_0142F.1_g064120 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 7.4e-93 346.3 469 44.6
PGR142G3228 Punica granatum HOM05D005720 ORTHO05D006984 2.2e-92 344.7 978 31.9
HPP92_005221 Vanilla planifolia HOM05D005720 ORTHO05D006984 1.8e-91 341.7 957 31.3
CDE02G2607 Ceratophyllum demersum HOM05D005720 ORTHO05D006984 9.4e-88 329.3 844 31.9
CSS0019438 Camellia sinensis var. sinensis HOM05D005720 ORTHO05D006984 1.1e-83 315.8 459 46.4
Lj3A914T79 Lonicera japonica HOM05D005720 ORTHO05D006984 2.1e-79 301.6 597 39.2
ATR1131G019 Amborella trichopoda HOM05D005720 ORTHO05D006984 2.6e-77 294.7 1023 29.2
Zm00001eb119640 Zea mays HOM05D005720 ORTHO05D006984 1.4e-75 288.9 1008 27.9
CSS0038820 Camellia sinensis var. sinensis HOM05D005720 ORTHO05D006984 1.8e-70 271.9 458 42.8
Psat0s2250g0040 Pisum sativum HOM05D005720 ORTHO05D006984 3.8e-65 254.2 370 46.5
SEGI_30168 Sequoiadendron giganteum HOM05D005720 ORTHO05D006984 1.1e-64 252.7 1086 26.2
Lj3P914T60 Lonicera japonica HOM05D005720 ORTHO05D006984 2.1e-63 248.4 351 43.6
Sed0011275 Sechium edule HOM05D005720 ORTHO05D006984 4.7e-63 247.3 326 46.3
BcaB08g35658 Brassica carinata HOM05D005720 ORTHO05D006984 1.0e-62 246.1 552 34.8
HPP92_005214 Vanilla planifolia HOM05D005720 ORTHO05D006984 1.2e-61 242.7 917 27.2
Hma1.2p1_0142F.1_g064140 Hydrangea macrophylla HOM05D005720 ORTHO05D006984 1.2e-55 222.6 401 41.6
BcaB05g21993 Brassica carinata HOM05D005720 ORTHO05D006984 2.4e-51 208.4 982 26.2
TAR629G3278 Trochodendron aralioides HOM05D005720 ORTHO05D006984 5.4e-43 180.6 248 49.6
vmacro06589 Vaccinium macrocarpon HOM05D005720 ORTHO05D006984 1.1e-38 166.4 291 41.9
PGSC0003DMG400006595 Solanum tuberosum HOM05D005720 ORTHO05D006984 2.0e-37 162.2 248 47.2
BraA10t43127Z Brassica rapa HOM05D005720 ORTHO05D006984 1.1e-35 156.4 332 34.3
MBI16_g03131_MAGBIO Magnolia biondii HOM05D005720 ORTHO05D006984 2.7e-34 151.8 520 30.8
Os01g0222300 Oryza sativa ssp. japonica HOM05D005720 ORTHO05D006984 1.1e-30 139.8 349 32.4
SEGI_32546 Sequoiadendron giganteum HOM05D005720 ORTHO05D006984 3.0e-25 121.7 768 24.9
SHI10812 Sapria himalayana HOM05D005720 ORTHO05D006984 5.1e-17 94.4 170 40.6
RcHm_v2.0_Chr1g0379741 Rosa chinensis HOM05D005720 ORTHO05D006984 4.2e-11 74.7 95 48.4
BcaB08g35657 Brassica carinata HOM05D005720 ORTHO05D006984 5.1e-09 67.8 171 38.0
Pp3c15_13500 Physcomitrium patens HOM05D005720 ORTHO05D006984 6.6e-09 67.4 129 34.9
Lju188P3T29 Lonicera japonica HOM05D005720 ORTHO05D006984 8.7e-09 67.0 83 50.6
MSTRG.8687 Avicennia marina HOM05D005720 ORTHO05D006984 7.3e-08 63.9 136 38.2
Mapoly0039s0001 Marchantia polymorpha HOM05D005720 ORTHO05D006984 7.3e-08 63.9 264 26.1
AagrBONN_evm.TU.Sc2ySwM_117.1094 Anthoceros agrestis HOM05D005720 ORTHO05D006984 8.1e-07 60.5 253 26.9


User provided reference genes

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