Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc13g0008850 Simmondsia chinensis HOM05D003626 ORTHO05D004255 0.0e+00 1177.5 638 100.0
Sc19g0001390 Simmondsia chinensis HOM05D003626 ORTHO05D004255 6.9e-82 309.3 638 40.8
GSVIVG01028908001 Vitis vinifera HOM05D003626 ORTHO05D004255 1.7e-72 278.1 646 35.6
Manes.06G149800 Manihot esculenta HOM05D003626 ORTHO05D004255 7.1e-71 272.7 689 34.8
EL10Ac3g05599 Beta vulgaris HOM05D003626 ORTHO05D004255 9.3e-71 272.3 678 35.1
Gohir.D08G110300 Gossypium hirsutum HOM05D003626 ORTHO05D004255 2.7e-70 270.8 295 52.9
Gohir.A08G098700 Gossypium hirsutum HOM05D003626 ORTHO05D004255 6.0e-70 269.6 311 50.8
Rhsim03G0188200 Rhododendron simsii HOM05D003626 ORTHO05D004255 7.9e-70 269.2 642 35.8
Ah.07g206910 Amaranthus hybridus HOM05D003626 ORTHO05D004255 1.0e-69 268.9 626 36.9
Gorai.004G117900 Gossypium raimondii HOM05D003626 ORTHO05D004255 1.8e-69 268.1 635 36.4
Cpa.g.sc107.76 Carica papaya HOM05D003626 ORTHO05D004255 1.1e-68 265.4 299 50.5
SalBow4G0890 Salvia bowleyana HOM05D003626 ORTHO05D004255 9.6e-68 262.3 674 36.4
vmacro06655 Vaccinium macrocarpon HOM05D003626 ORTHO05D004255 4.8e-67 260.0 637 34.7
Duzib068G0520 Durio zibethinus HOM05D003626 ORTHO05D004255 1.4e-66 258.5 256 55.5
Hma1.2p1_0227F.1_g095920 Hydrangea macrophylla HOM05D003626 ORTHO05D004255 1.8e-66 258.1 637 35.9
RcHm_v2.0_Chr1g0377821 Rosa chinensis HOM05D003626 ORTHO05D004255 2.4e-66 257.7 640 36.9
Aqoxy7G00296 Aquilegia oxysepala HOM05D003626 ORTHO05D004255 4.0e-66 256.9 324 46.6
arahy.Tifrunner.gnm1.ann1.DJI5YQ Arachis hypogaea HOM05D003626 ORTHO05D004255 6.9e-66 256.1 310 47.4
Actinidia25889 Actinidia chinensis HOM05D003626 ORTHO05D000962 2.0e-65 254.6 651 34.4
arahy.Tifrunner.gnm1.ann1.TX8CZR Arachis hypogaea HOM05D003626 ORTHO05D004255 2.0e-65 254.6 310 47.1
DCAR_020260 Daucus carota HOM05D003626 ORTHO05D004255 5.8e-65 253.1 648 33.8
AUR62015951 Chenopodium quinoa HOM05D003626 ORTHO05D004255 1.3e-64 251.9 738 32.9
AUR62021157 Chenopodium quinoa HOM05D003626 ORTHO05D004255 2.2e-64 251.1 666 34.8
Lsat_1_v5_gn_9_55160 Lactuca sativa HOM05D003626 ORTHO05D004255 2.2e-64 251.1 296 49.0
Thecc.03G180000 Theobroma cacao HOM05D003626 ORTHO05D004255 1.1e-63 248.8 662 35.2
Prupe.2G297500 Prunus persica HOM05D003626 ORTHO05D004255 1.4e-63 248.4 642 34.4
Sabra15G0155500 Salix brachista HOM05D003626 ORTHO05D004255 1.4e-63 248.4 300 49.3
HanXRQChr14g0462361 Helianthus annuus HOM05D003626 ORTHO05D004255 2.5e-63 247.7 649 33.6
PSO782G4415 Papaver somniferum HOM05D003626 ORTHO05D004255 7.1e-63 246.1 326 46.0
MSTRG.27103 Avicennia marina HOM05D003626 ORTHO05D004255 1.2e-62 245.4 536 38.6
Lj1C1001T6 Lonicera japonica HOM05D003626 ORTHO05D004255 1.2e-62 245.4 648 32.9
Dinv28414 Davidia involucrata HOM05D003626 ORTHO05D004255 1.6e-62 245.0 633 35.2
Duzib205G1576 Durio zibethinus HOM05D003626 ORTHO05D004255 6.1e-62 243.0 619 35.4
TAR629G0048 Trochodendron aralioides HOM05D003626 ORTHO05D004255 7.9e-62 242.7 664 31.9
Duzib084G0771 Durio zibethinus HOM05D003626 ORTHO05D004255 1.0e-61 242.3 639 34.1
TWI39G1025 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 1.8e-61 241.5 648 33.6
Phvul.007G072400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 3.0e-61 240.7 332 45.5
Manes.14G024700 Manihot esculenta HOM05D003626 ORTHO05D004255 3.9e-61 240.4 641 33.5
ATR0680G428 Amborella trichopoda HOM05D003626 ORTHO05D004255 8.7e-61 239.2 261 50.6
TWI23G0117 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 1.5e-60 238.4 639 33.3
MSTRG.82 Avicennia marina HOM05D003626 ORTHO05D004255 2.5e-60 237.7 288 52.1
Potri.015G146300 Populus trichocarpa HOM05D003626 ORTHO05D004255 2.5e-60 237.7 640 34.8
Nitab4.5_0001951g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 4.3e-60 236.9 660 33.2
FAN03G0953 Fragaria x ananassa HOM05D003626 ORTHO05D004255 7.4e-60 236.1 671 33.4
Glyma.10G233400 Glycine max HOM05D003626 ORTHO05D004255 7.4e-60 236.1 625 33.6
Nn6g33408 Nelumbo nucifera HOM05D003626 ORTHO05D004255 7.4e-60 236.1 659 33.4
Hund04768 Selenicereus undatus HOM05D003626 ORTHO05D004255 9.7e-60 235.7 662 31.7
VMungo0720G1546 Vigna mungo HOM05D003626 ORTHO05D004255 9.7e-60 235.7 344 43.6
SGA_v2.0_scaffold60G21078 Striga asiatica HOM05D003626 ORTHO05D004255 1.3e-59 235.3 297 53.2
CDE06G1616 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 1.6e-59 235.0 342 43.0
ECA233G2749 Erigeron canadensis HOM05D003626 ORTHO05D004255 2.2e-59 234.6 324 43.5
Nitab4.5_0000080g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 2.2e-59 234.6 637 32.5
TAR636G1367 Trochodendron aralioides HOM05D003626 ORTHO05D004255 2.2e-59 234.6 697 32.6
Migut.F01102 Erythranthe guttata HOM05D003626 ORTHO05D004255 4.8e-59 233.4 629 36.1
Ciclev10006582m.g Citrus clementina HOM05D003626 ORTHO05D004255 1.8e-58 231.5 256 51.6
ClCG05G008170 Citrullus lanatus HOM05D003626 ORTHO05D004255 2.4e-58 231.1 272 48.5
FvH4_7g29860 Fragaria vesca HOM05D003626 ORTHO05D004255 2.4e-58 231.1 672 32.7
CsaV3_3G017260 Cucumis sativus L. HOM05D003626 ORTHO05D004255 4.1e-58 230.3 655 32.4
PSO478G3353 Papaver somniferum HOM05D003626 ORTHO05D004255 9.0e-58 229.2 639 31.9
Sed0000543 Sechium edule HOM05D003626 ORTHO05D004255 9.0e-58 229.2 658 33.4
ECA238G3668 Erigeron canadensis HOM05D003626 ORTHO05D004255 1.2e-57 228.8 692 32.8
Psat6g197120 Pisum sativum HOM05D003626 ORTHO05D004255 1.5e-57 228.4 640 33.1
MELO3C006924.2 Cucumis melo HOM05D003626 ORTHO05D004255 3.4e-57 227.3 656 32.3
Gohir.A12G256000 Gossypium hirsutum HOM05D003626 ORTHO05D004255 5.9e-57 226.5 631 33.8
MD07G1273500 Malus domestica HOM05D003626 ORTHO05D004255 1.0e-56 225.7 628 35.2
CiPaw.05G264100 Carya illinoinensis HOM05D003626 ORTHO05D004255 1.7e-56 224.9 644 32.6
Nn1g01542 Nelumbo nucifera HOM05D003626 ORTHO05D004255 2.2e-56 224.6 620 31.5
Aa31LG3G8800 Aethionema arabicum HOM05D003626 ORTHO05D004255 2.9e-56 224.2 253 48.6
Lalb_Chr03g0034731 Lupinus albus HOM05D003626 ORTHO05D004255 2.9e-56 224.2 645 33.0
THA.LOC104825103 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 2.9e-56 224.2 260 46.9
Gorai.008G275600 Gossypium raimondii HOM05D003626 ORTHO05D004255 5.0e-56 223.4 636 32.9
Peaxi162Scf00848g00116 Petunia axillaris HOM05D003626 ORTHO05D004255 6.5e-56 223.0 265 47.2
TAR375G0013 Trochodendron aralioides HOM05D003626 ORTHO05D004255 6.5e-56 223.0 281 49.5
Atru.chr1.420 Acer truncatum HOM05D003626 ORTHO05D004255 8.5e-56 222.6 656 33.4
MD01G1205100 Malus domestica HOM05D003626 ORTHO05D004255 8.5e-56 222.6 631 35.7
Cc02_g02700 Coffea canephora HOM05D003626 ORTHO05D004255 1.1e-55 222.2 633 32.1
Phvul.004G113400 Phaseolus vulgaris HOM05D003626 ORTHO05D004255 1.1e-55 222.2 629 31.2
Potri.012G143200 Populus trichocarpa HOM05D003626 ORTHO05D004255 1.1e-55 222.2 641 32.8
CANSAT21G2257 Cannabis sativa HOM05D003626 ORTHO05D004255 3.2e-55 220.7 283 47.0
Dinv35227 Davidia involucrata HOM05D003626 ORTHO05D004255 9.4e-55 219.2 504 36.1
Nitab4.5_0004439g0040 Nicotiana tabacum HOM05D003626 ORTHO05D004255 1.6e-54 218.4 628 32.0
DCAR_029574 Daucus carota HOM05D003626 ORTHO05D004255 2.7e-54 217.6 242 48.3
Glyma.20G161000 Glycine max HOM05D003626 ORTHO05D004255 2.7e-54 217.6 638 33.4
Lalb_Chr02g0141141 Lupinus albus HOM05D003626 ORTHO05D004255 3.6e-54 217.2 485 34.4
Cfa016262 Carpinus fangiana HOM05D003626 ORTHO05D004255 4.6e-54 216.9 640 34.2
Lj5g0006318 Lotus japonicus HOM05D003626 ORTHO05D004255 6.1e-54 216.5 317 42.6
PGR042G2663 Punica granatum HOM05D003626 ORTHO05D004255 6.1e-54 216.5 631 32.6
THA.LOC104811971 Tarenaya hassleriana HOM05D003626 ORTHO05D004255 6.1e-54 216.5 645 34.7
Ca_10741_v3 Cicer arietinum L. HOM05D003626 ORTHO05D004255 1.0e-53 215.7 644 33.7
Peaxi162Scf00444g00425 Petunia axillaris HOM05D003626 ORTHO05D004255 1.8e-53 214.9 639 32.1
Gohir.D12G257400 Gossypium hirsutum HOM05D003626 ORTHO05D004255 3.0e-53 214.2 637 32.2
CAN.G1175.16 Capsicum annuum HOM05D003626 ORTHO05D004255 3.9e-53 213.8 323 42.4
TWI14G0197 Tripterygium wilfordii HOM05D003626 ORTHO05D004255 3.9e-53 213.8 569 32.9
Oeu004107.1 Olea europaea HOM05D003626 ORTHO05D004255 5.1e-53 213.4 668 31.7
AL7G27480 Arabidopsis lyrata HOM05D003626 ORTHO05D004255 6.7e-53 213.0 245 46.9
Thhalv10024755m.g Eutrema salsugineum HOM05D003626 ORTHO05D004255 6.7e-53 213.0 245 46.9
Carub.0007s1537 Capsella rubella HOM05D003626 ORTHO05D004255 8.8e-53 212.6 245 46.1
Glyma.16G181700 Glycine max HOM05D003626 ORTHO05D004255 1.5e-52 211.8 639 31.9
Sp7g23640 Schrenkiella parvula HOM05D003626 ORTHO05D004255 1.5e-52 211.8 274 44.9
Lalb_Chr19g0130741 Lupinus albus HOM05D003626 ORTHO05D004255 3.3e-52 210.7 604 33.1
arahy.Tifrunner.gnm1.ann1.7Y9ZSE Arachis hypogaea HOM05D003626 ORTHO05D004255 4.3e-52 210.3 651 32.0
BraA03t14686Z Brassica rapa HOM05D003626 ORTHO05D004255 4.3e-52 210.3 252 45.6
AT4G25610 Arabidopsis thaliana HOM05D003626 ORTHO05D004255 5.7e-52 209.9 245 45.7
HPP92_001476 Vanilla planifolia HOM05D003626 ORTHO05D004255 5.7e-52 209.9 346 40.8
CARHR233030 Cardamine hirsuta HOM05D003626 ORTHO05D004255 7.4e-52 209.5 245 46.5
BcaC06g32796 Brassica carinata HOM05D003626 ORTHO05D004255 1.3e-51 208.8 248 46.0
Medtr6g053660 Medicago truncatula HOM05D003626 ORTHO05D004255 1.3e-51 208.8 257 48.2
unitig_0.g459 Utricularia gibba HOM05D003626 ORTHO05D004255 1.3e-51 208.8 251 49.0
arahy.Tifrunner.gnm1.ann1.26FV7C Arachis hypogaea HOM05D003626 ORTHO05D004255 1.7e-51 208.4 636 32.1
C07p54460 Brassica napus HOM05D003626 ORTHO05D004255 2.2e-51 208.0 253 45.5
Medtr1g100810 Medicago truncatula HOM05D003626 ORTHO05D004255 2.8e-51 207.6 652 32.5
TPR.G26995 Trifolium pratense HOM05D003626 ORTHO05D004255 4.8e-51 206.8 636 31.3
BcaC09g50754 Brassica carinata HOM05D003626 ORTHO05D004255 1.4e-50 205.3 252 44.4
FAN10G2476 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.8e-50 204.9 674 31.8
BolC7t45931H Brassica oleracea HOM05D003626 ORTHO05D004255 2.4e-50 204.5 253 45.1
Oeu061653.1 Olea europaea HOM05D003626 ORTHO05D004255 2.4e-50 204.5 670 31.6
BcaNung03703 Brassica carinata HOM05D003626 ORTHO05D004255 3.1e-50 204.1 252 44.8
Eucgr.L00411 Eucalyptus grandis HOM05D003626 ORTHO05D004255 3.1e-50 204.1 294 41.8
Lj2g0008392 Lotus japonicus HOM05D003626 ORTHO05D004255 3.1e-50 204.1 201 53.2
TPR.G8172 Trifolium pratense HOM05D003626 ORTHO05D004255 3.1e-50 204.1 380 38.2
FAN10G0313 Fragaria x ananassa HOM05D003626 ORTHO05D004255 4.1e-50 203.8 674 31.8
Solyc06g036060.4 Solanum lycopersicum HOM05D003626 ORTHO05D004255 5.3e-50 203.4 337 39.2
Zm00001eb095880 Zea mays HOM05D003626 ORTHO05D004255 5.3e-50 203.4 590 30.2
A03p56130 Brassica napus HOM05D003626 ORTHO05D004255 6.9e-50 203.0 370 38.4
C01p21150 Brassica napus HOM05D003626 ORTHO05D004255 6.9e-50 203.0 245 44.1
SEGI_20458 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 9.1e-50 202.6 201 51.7
FAN06G2167 Fragaria x ananassa HOM05D003626 ORTHO05D004255 4.5e-49 200.3 424 36.6
Lalb_Chr06g0161221 Lupinus albus HOM05D003626 ORTHO05D004255 4.5e-49 200.3 638 32.4
Solyc03g025440.3 Solanum lycopersicum HOM05D003626 ORTHO05D004255 4.5e-49 200.3 634 30.8
Sopen03g004280 Solanum pennellii HOM05D003626 ORTHO05D004255 1.0e-48 199.1 634 30.6
PGSC0003DMG400015791 Solanum tuberosum HOM05D003626 ORTHO05D004255 1.7e-48 198.4 415 35.9
FAN01G0376 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.9e-47 194.9 646 31.3
Sopen06g011810 Solanum pennellii HOM05D003626 ORTHO05D004255 2.5e-47 194.5 511 30.9
A01p16870 Brassica napus HOM05D003626 ORTHO05D004255 4.2e-47 193.7 245 43.7
SMO347G0135 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 5.5e-47 193.4 293 39.2
COL.COLO4_28044 Corchorus olitorius HOM05D003626 ORTHO05D004255 7.2e-47 193.0 663 30.2
FAN03G3125 Fragaria x ananassa HOM05D003626 ORTHO05D004255 7.2e-47 193.0 671 31.0
Os09g0570200 Oryza sativa ssp. japonica HOM05D003626 ORTHO05D004255 1.2e-46 192.2 243 43.2
VMungo0464G2114 Vigna mungo HOM05D003626 ORTHO05D002946 1.6e-46 191.8 402 35.8
Psat0s4127g0040 Pisum sativum HOM05D003626 ORTHO05D004255 4.7e-46 190.3 633 31.8
Nitab4.5_0000084g0130 Nicotiana tabacum HOM05D003626 ORTHO05D004255 6.1e-46 189.9 632 30.1
Migut.F00325 Erythranthe guttata HOM05D003626 ORTHO05D004255 2.3e-45 188.0 678 32.4
PGR142G2556 Punica granatum HOM05D003626 ORTHO05D004255 6.7e-45 186.4 358 35.5
unitig_22.g5223 Utricularia gibba HOM05D003626 ORTHO05D004255 1.1e-44 185.7 388 36.6
Eucgr.A02765 Eucalyptus grandis HOM05D003626 ORTHO05D004255 5.7e-44 183.3 295 41.0
Mapoly0003s0245 Marchantia polymorpha HOM05D003626 ORTHO05D004255 5.3e-42 176.8 299 35.8
Eucgr.E00978 Eucalyptus grandis HOM05D003626 ORTHO05D004255 3.2e-39 167.5 294 37.8
Sabra12G0107600 Salix brachista HOM05D003626 ORTHO05D004255 1.2e-38 165.6 645 31.0
Sed0014313 Sechium edule HOM05D003626 ORTHO05D004255 1.6e-38 165.2 650 29.2
Haze_00014 Corylus avellana HOM05D003626 ORTHO05D004255 7.4e-36 156.4 684 29.4
CSS0037833 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 1.1e-34 152.5 134 58.2
CDE02G1538 Ceratophyllum demersum HOM05D003626 ORTHO05D004255 3.1e-34 151.0 171 48.5
HPP92_011473 Vanilla planifolia HOM05D003626 ORTHO05D004255 1.2e-25 122.5 249 37.8
Zm00001eb224460 Zea mays HOM05D003626 ORTHO05D004255 8.5e-24 116.3 173 38.7
Pp3c10_4090 Physcomitrium patens HOM05D003626 ORTHO05D004255 1.8e-21 108.6 338 32.8
SEGI_03018 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 2.6e-20 104.8 81 63.0
FAN06G1666 Fragaria x ananassa HOM05D003626 ORTHO05D004255 1.3e-19 102.4 254 34.3
CSS0041965 Camellia sinensis var. sinensis HOM05D003626 ORTHO05D004255 1.7e-19 102.1 133 46.6
SMO356G0700 Selaginella moellendorffii HOM05D003626 ORTHO05D004255 3.7e-19 100.9 199 35.7
SEGI_33334 Sequoiadendron giganteum HOM05D003626 ORTHO05D004255 1.4e-18 99.0 111 46.8
AagrBONN_evm.TU.Sc2ySwM_344.1743 Anthoceros agrestis HOM05D003626 ORTHO05D004255 1.4e-13 82.4 252 25.8
Glyma.09G136202 Glycine max HOM05D003626 ORTHO05D004255 6.3e-11 73.6 63 58.7
Lalb_Chr21g0305131 Lupinus albus HOM05D003626 ORTHO05D004255 5.9e-09 67.0 92 44.6


User provided reference genes

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