Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc13g0008390 Simmondsia chinensis HOM05D007174 ORTHO05D009061 7.4e-138 493.8 241 100.0
Sc13g0008380 Simmondsia chinensis HOM05D007174 ORTHO05D009061 1.1e-69 267.3 261 54.4
CSS0029278 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 7.4e-53 211.5 245 47.8
CSS0008795 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 6.2e-52 208.4 245 47.3
QL09p015458 Quercus lobata HOM05D007174 ORTHO05D009061 2.4e-51 206.5 180 57.8
Rhsim09G0195900 Rhododendron simsii HOM05D007174 ORTHO05D009061 2.4e-51 206.5 240 47.9
CSS0030546 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 4.0e-51 205.7 246 45.9
Dinv35170 Davidia involucrata HOM05D007174 ORTHO05D009061 1.5e-50 203.8 244 45.5
MD01G1195800 Malus domestica HOM05D007174 ORTHO05D009061 1.5e-50 203.8 181 55.8
CiPaw.04G068400 Carya illinoinensis HOM05D007174 ORTHO05D009061 1.0e-49 201.1 238 46.2
MSTRG.27141 Avicennia marina HOM05D007174 ORTHO05D009061 1.7e-49 200.3 181 55.2
EL10Ac3g05682 Beta vulgaris HOM05D007174 ORTHO05D009061 2.9e-49 199.5 215 48.8
FvH4_7g28911 Fragaria vesca HOM05D007174 ORTHO05D009061 2.9e-49 199.5 180 55.0
GSVIVG01010637001 Vitis vinifera HOM05D007174 ORTHO05D009061 3.8e-49 199.1 246 45.1
Prupe.2G289100 Prunus persica HOM05D007174 ORTHO05D009061 4.9e-49 198.7 218 48.2
vmacro09863 Vaccinium macrocarpon HOM05D007174 ORTHO05D009061 1.1e-48 197.6 238 45.8
Thecc.03G169500 Theobroma cacao HOM05D007174 ORTHO05D009061 1.4e-48 197.2 180 56.1
Glyma.16G199500 Glycine max HOM05D007174 ORTHO05D009061 2.5e-48 196.4 182 55.5
Nitab4.5_0008764g0010 Nicotiana tabacum HOM05D007174 ORTHO05D009061 2.5e-48 196.4 246 43.5
FAN06G1461 Fragaria x ananassa HOM05D000059 ORTHO05D005093 4.2e-48 195.7 180 54.4
CsaV3_3G016740 Cucumis sativus L. HOM05D007174 ORTHO05D009061 9.3e-48 194.5 181 51.9
Phvul.004G122400 Phaseolus vulgaris HOM05D007174 ORTHO05D009061 9.3e-48 194.5 181 56.4
Cpa.g.sc3.335 Carica papaya HOM05D007174 ORTHO05D009061 1.2e-47 194.1 184 54.3
FAN01G2691 Fragaria x ananassa HOM05D000059 ORTHO05D005093 2.1e-47 193.4 180 53.3
Gohir.A12G261100 Gossypium hirsutum HOM05D007174 ORTHO05D009061 2.7e-47 193.0 190 53.2
Lalb_Chr19g0131081 Lupinus albus HOM05D007174 ORTHO05D009061 2.7e-47 193.0 194 52.1
Manes.14G029900 Manihot esculenta HOM05D007174 ORTHO05D009061 2.7e-47 193.0 237 44.3
Medtr6g465290 Medicago truncatula HOM05D007174 ORTHO05D009061 2.7e-47 193.0 244 45.1
Eucgr.K00215 Eucalyptus grandis HOM05D007174 ORTHO05D009061 4.6e-47 192.2 181 54.1
MELO3C006867.2 Cucumis melo HOM05D007174 ORTHO05D009061 6.0e-47 191.8 181 51.9
HanXRQChr15g0473391 Helianthus annuus HOM05D000003 ORTHO05D000004 6.0e-47 191.8 181 53.6
Psat1g105240 Pisum sativum HOM05D007174 ORTHO05D009061 6.0e-47 191.8 180 53.9
Potri.012G134500 Populus trichocarpa HOM05D007174 ORTHO05D009061 6.0e-47 191.8 181 51.9
Sabra12G0101100 Salix brachista HOM05D007174 ORTHO05D009061 6.0e-47 191.8 181 53.0
FAN03G3394 Fragaria x ananassa HOM05D000059 ORTHO05D005093 1.0e-46 191.0 180 52.2
Lj1A990G55 Lonicera japonica HOM05D007174 ORTHO05D009061 1.0e-46 191.0 181 53.0
Ciclev10005753m.g Citrus clementina HOM05D007174 ORTHO05D009061 1.8e-46 190.3 236 46.2
Sopen03g005220 Solanum pennellii HOM05D007174 ORTHO05D009061 1.8e-46 190.3 245 42.0
DCAR_018153 Daucus carota HOM05D007174 ORTHO05D009061 2.3e-46 189.9 254 42.9
Glyma.09G147500 Glycine max HOM05D007174 ORTHO05D009061 2.3e-46 189.9 181 54.1
Lj2g0011010 Lotus japonicus HOM05D007174 ORTHO05D009061 2.3e-46 189.9 181 55.8
Atru.chr1.537 Acer truncatum HOM05D007174 ORTHO05D009061 3.0e-46 189.5 184 52.2
CANSAT21G1580 Cannabis sativa HOM05D007174 ORTHO05D009061 3.0e-46 189.5 183 54.1
ClCG05G007760 Citrullus lanatus HOM05D002642 ORTHO05D002834 3.0e-46 189.5 181 51.9
Nitab4.5_0000832g0170 Nicotiana tabacum HOM05D007174 ORTHO05D009061 3.0e-46 189.5 246 42.7
Lj6g0017578 Lotus japonicus HOM05D007174 ORTHO05D009061 3.9e-46 189.1 181 56.4
VMungo0464G0116 Vigna mungo HOM05D007174 ORTHO05D009061 3.9e-46 189.1 181 56.4
Duzib205G1938 Durio zibethinus HOM05D007174 ORTHO05D009061 5.1e-46 188.7 180 54.4
Gorai.008G280800 Gossypium raimondii HOM05D007174 ORTHO05D009061 6.7e-46 188.3 190 52.1
TAR374G0585 Trochodendron aralioides HOM05D007174 ORTHO05D009061 6.7e-46 188.3 188 52.7
EL10Ac3g05680 Beta vulgaris HOM05D007174 ORTHO05D009061 8.7e-46 188.0 180 52.2
Lsat_1_v5_gn_9_53840 Lactuca sativa HOM05D007174 ORTHO05D009061 8.7e-46 188.0 181 53.0
Nn1g01328 Nelumbo nucifera HOM05D007174 ORTHO05D009061 8.7e-46 188.0 180 51.1
arahy.Tifrunner.gnm1.ann1.CGP099 Arachis hypogaea HOM05D007174 ORTHO05D009061 1.5e-45 187.2 215 47.9
PGSC0003DMG400014262 Solanum tuberosum HOM05D007174 ORTHO05D009061 2.5e-45 186.4 246 41.5
CAN.G548.22 Capsicum annuum HOM05D007174 ORTHO05D009061 3.3e-45 186.0 181 50.8
FAN03G1635 Fragaria x ananassa HOM05D000059 ORTHO05D005093 3.3e-45 186.0 180 51.7
arahy.Tifrunner.gnm1.ann1.AW02WS Arachis hypogaea HOM05D007174 ORTHO05D009061 4.3e-45 185.7 180 54.4
Dinv28496 Davidia involucrata HOM05D000059 ORTHO05D005093 5.7e-45 185.3 200 48.0
Sed0014335 Sechium edule HOM05D002642 ORTHO05D002834 5.7e-45 185.3 181 52.5
Cc02_g03460 Coffea canephora HOM05D007174 ORTHO05D009061 7.4e-45 184.9 250 42.8
RcHm_v2.0_Chr1g0376581 Rosa chinensis HOM05D007174 ORTHO05D009061 7.4e-45 184.9 180 53.3
TPR.G9185 Trifolium pratense HOM05D007174 ORTHO05D009061 9.6e-45 184.5 238 42.0
Migut.F00385 Erythranthe guttata HOM05D007174 ORTHO05D009061 1.6e-44 183.7 191 48.7
Actinidia03101 Actinidia chinensis HOM05D007174 ORTHO05D009061 2.1e-44 183.3 164 55.5
Aqoxy7G00468 Aquilegia oxysepala HOM05D007174 ORTHO05D009061 2.8e-44 183.0 179 51.4
CSS0030220 Camellia sinensis var. sinensis HOM05D007174 ORTHO05D009061 2.8e-44 183.0 246 42.7
Peaxi162Scf00648g00220 Petunia axillaris HOM05D007174 ORTHO05D009061 2.8e-44 183.0 244 41.0
FAN10G2932 Fragaria x ananassa HOM05D000059 ORTHO05D005093 3.7e-44 182.6 180 51.1
AUR62016040 Chenopodium quinoa HOM05D007174 ORTHO05D009061 6.3e-44 181.8 180 50.6
TWI23G0481 Tripterygium wilfordii HOM05D007174 ORTHO05D009061 8.2e-44 181.4 239 46.0
COL.COLO4_14250 Corchorus olitorius HOM05D000059 ORTHO05D005093 1.4e-43 180.6 181 53.0
SalBow4G1508 Salvia bowleyana HOM05D007174 ORTHO05D009061 4.1e-43 179.1 201 47.8
Sc25g0000350 Simmondsia chinensis HOM05D007174 ORTHO05D009061 4.1e-43 179.1 239 42.3
PGR142G4376 Punica granatum HOM05D007174 ORTHO05D009061 1.5e-42 177.2 180 49.4
MBI04_g40843_MAGBIO Magnolia biondii HOM05D007174 ORTHO05D009061 2.2e-41 173.3 180 48.3
SGA_v2.0_scaffold2G01087 Striga asiatica HOM05D007174 ORTHO05D009061 1.9e-40 170.2 235 42.1
Haze_13772 Corylus avellana HOM05D007174 ORTHO05D009061 5.5e-40 168.7 240 42.1
Os02g0677600 Oryza sativa ssp. japonica HOM05D007174 ORTHO05D009061 2.7e-39 166.4 180 46.1
Oeu030133.1 Olea europaea HOM05D007174 ORTHO05D009061 3.6e-39 166.0 141 55.3
ECA232G4749 Erigeron canadensis HOM05D007174 ORTHO05D009061 6.1e-39 165.2 143 56.6
Zm00001eb187200 Zea mays HOM05D007174 ORTHO05D009061 6.1e-39 165.2 182 45.1
Carub.0008s2281 Capsella rubella HOM05D007174 ORTHO05D009061 7.9e-39 164.9 183 48.1
AT5G62140 Arabidopsis thaliana HOM05D007174 ORTHO05D009061 3.0e-38 162.9 183 47.5
AL8G38920 Arabidopsis lyrata HOM05D007174 ORTHO05D009061 5.1e-38 162.2 183 46.4
ATR0757G135 Amborella trichopoda HOM05D007174 ORTHO05D009061 1.5e-37 160.6 180 46.7
BcaB07g29797 Brassica carinata HOM05D007174 ORTHO05D009061 1.5e-37 160.6 187 48.1
Sp2g25310 Schrenkiella parvula HOM05D007174 ORTHO05D009061 1.5e-37 160.6 219 44.7
Thhalv10004841m.g Eutrema salsugineum HOM05D007174 ORTHO05D009061 1.9e-37 160.2 184 47.3
SEGI_06842 Sequoiadendron giganteum HOM05D007174 ORTHO05D009061 3.3e-37 159.5 180 45.6
THA.LOC104826810 Tarenaya hassleriana HOM05D007174 ORTHO05D009061 4.3e-37 159.1 184 47.8
BolC2t12246H Brassica oleracea HOM05D007174 ORTHO05D009061 7.4e-37 158.3 187 48.1
BcaC03g18123 Brassica carinata HOM05D007174 ORTHO05D009061 9.7e-37 157.9 187 46.5
A02p42000 Brassica napus HOM05D007174 ORTHO05D009061 9.7e-37 157.9 187 46.0
BraA02t09135Z Brassica rapa HOM05D007174 ORTHO05D009061 9.7e-37 157.9 187 46.0
CARHR275910 Cardamine hirsuta HOM05D007174 ORTHO05D009061 3.7e-36 156.0 183 46.4
arahy.Tifrunner.gnm1.ann1.09T8EW Arachis hypogaea HOM05D007174 ORTHO05D009061 5.3e-35 152.1 180 47.8
Mapoly0145s0018 Marchantia polymorpha HOM05D007174 ORTHO05D009061 2.6e-34 149.8 184 44.6
AagrBONN_evm.TU.Sc2ySwM_228.5753 Anthoceros agrestis HOM05D007174 ORTHO05D009061 1.3e-33 147.5 205 39.5
arahy.Tifrunner.gnm1.ann1.JY00AE Arachis hypogaea HOM05D007174 ORTHO05D009061 1.7e-33 147.1 164 50.0
SMO137G0111 Selaginella moellendorffii HOM05D007174 ORTHO05D009061 2.5e-32 143.3 214 40.7
Pp3c13_6960 Physcomitrium patens HOM05D007174 ORTHO05D009061 1.5e-29 134.0 181 38.7
CBR_g53539 Chara braunii HOM05D007174 ORTHO05D009061 1.7e-28 130.6 182 41.2
unitig_747.g21761 Utricularia gibba HOM05D007174 ORTHO05D009061 5.9e-26 122.1 183 39.3
Pp3c4_22170 Physcomitrium patens HOM05D007174 ORTHO05D009061 1.3e-25 120.9 181 37.0
Gohir.D12G262000 Gossypium hirsutum HOM05D007174 ORTHO05D009061 1.5e-21 107.5 190 36.8
AUR62021246 Chenopodium quinoa HOM05D007174 ORTHO05D009061 2.2e-20 103.6 88 56.8
HanXRQChr15g0482681 Helianthus annuus HOM05D007174 ORTHO05D009061 5.9e-18 95.5 144 39.6
arahy.Tifrunner.gnm1.ann1.U0QS20 Arachis hypogaea HOM05D007174 ORTHO05D009061 1.7e-17 94.0 174 34.5
Cre01.g019600 Chlamydomonas reinhardtii HOM05D007174 ORTHO05D009061 6.5e-17 92.0 190 34.2
Solyc03g026330.4 Solanum lycopersicum HOM05D007174 ORTHO05D009061 6.1e-15 85.5 156 32.7
arahy.Tifrunner.gnm1.ann1.BIF85U Arachis hypogaea HOM05D007174 ORTHO05D009061 2.3e-14 83.6 84 51.2
Aa31LG11G1430 Aethionema arabicum HOM05D007174 ORTHO05D009061 2.0e-10 70.5 65 52.3
Pp3c26_1960 Physcomitrium patens HOM05D007174 ORTHO05D009061 9.4e-08 61.6 96 34.4
SEGI_30770 Sequoiadendron giganteum HOM05D000501 ORTHO05D009061 1.4e-06 57.8 82 35.4
MCO06G097 Micromonas commoda HOM05D007174 ORTHO05D009061 1.8e-06 57.4 116 31.9


User provided reference genes

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