Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc13g0008100 Simmondsia chinensis HOM05D007669 ORTHO05D009624 0.0e+00 1469.1 761 100.0
EL10Ac8g19326 Beta vulgaris HOM05D007669 ORTHO05D009624 3.0e-177 626.3 750 46.5
Hund06703 Selenicereus undatus HOM05D007669 ORTHO05D009624 1.5e-176 624.0 798 45.6
Dinv25484 Davidia involucrata HOM05D007669 ORTHO05D009624 2.8e-167 593.2 766 45.6
Ah.09g232160 Amaranthus hybridus HOM05D007669 ORTHO05D009624 3.7e-167 592.8 757 45.8
AUR62031310 Chenopodium quinoa HOM05D007669 ORTHO05D009624 4.8e-167 592.4 755 45.0
Cfa013482 Carpinus fangiana HOM05D007669 ORTHO05D009624 5.4e-158 562.4 763 43.1
GSVIVG01029262001 Vitis vinifera HOM05D007669 ORTHO05D009624 1.4e-153 547.7 760 42.2
Nn8g40420 Nelumbo nucifera HOM05D007669 ORTHO05D009624 6.4e-151 538.9 784 43.1
CANSAT11G2077 Cannabis sativa HOM05D007669 ORTHO05D009624 1.4e-150 537.7 758 43.4
Ciclev10007518m.g Citrus clementina HOM05D007669 ORTHO05D009624 5.0e-148 529.3 754 43.1
TPR.G5403 Trifolium pratense HOM05D007669 ORTHO05D009624 1.5e-147 527.7 755 42.3
Lj4g0015120 Lotus japonicus HOM05D007669 ORTHO05D009624 1.9e-147 527.3 744 42.3
ClCG06G013870 Citrullus lanatus HOM05D007669 ORTHO05D009624 4.7e-146 522.7 747 41.0
MD13G1236300 Malus domestica HOM05D007669 ORTHO05D009624 6.2e-146 522.3 762 41.6
FAN17G0559 Fragaria x ananassa HOM05D007669 ORTHO05D009624 2.3e-145 520.4 752 41.4
arahy.Tifrunner.gnm1.ann1.YI9GDS Arachis hypogaea HOM05D007669 ORTHO05D009624 4.0e-145 519.6 755 42.4
arahy.Tifrunner.gnm1.ann1.BQQL35 Arachis hypogaea HOM05D007669 ORTHO05D009624 8.9e-145 518.5 759 42.0
FAN07G2841 Fragaria x ananassa HOM05D007669 ORTHO05D009624 2.9e-143 513.5 751 41.7
TWI34G1867 Tripterygium wilfordii HOM05D007669 ORTHO05D009624 2.9e-143 513.5 753 41.7
Gohir.A05G248100 Gossypium hirsutum HOM05D007669 ORTHO05D009624 8.3e-143 511.9 740 41.6
Sabra18G0113000 Salix brachista HOM05D007669 ORTHO05D009624 1.9e-142 510.8 753 40.4
QL11p009976 Quercus lobata HOM05D007669 ORTHO05D009624 4.1e-142 509.6 878 37.8
Potri.018G133300 Populus trichocarpa HOM05D007669 ORTHO05D009624 1.2e-141 508.1 750 41.2
Sed0018351 Sechium edule HOM05D007669 ORTHO05D009624 1.6e-141 507.7 741 40.6
Gohir.D05G246300 Gossypium hirsutum HOM05D007669 ORTHO05D009624 2.1e-141 507.3 740 41.1
Manes.14G174400 Manihot esculenta HOM05D007669 ORTHO05D009624 2.7e-141 506.9 760 41.1
Gorai.009G262500 Gossypium raimondii HOM05D007669 ORTHO05D009624 6.0e-141 505.8 740 40.8
RcHm_v2.0_Chr4g0398451 Rosa chinensis HOM05D007669 ORTHO05D009624 6.0e-141 505.8 751 39.8
Duzib177G0349 Durio zibethinus HOM05D007669 ORTHO05D009624 4.3e-139 499.6 731 42.1
Phvul.003G138500 Phaseolus vulgaris HOM05D007669 ORTHO05D009624 9.5e-139 498.4 761 41.0
Medtr4g126780 Medicago truncatula HOM05D007669 ORTHO05D009624 4.7e-138 496.1 734 41.3
Rhsim01G0007900 Rhododendron simsii HOM05D007669 ORTHO05D009624 3.1e-137 493.4 750 39.7
Cc06_g12900 Coffea canephora HOM05D007669 ORTHO05D009624 2.0e-136 490.7 760 40.3
Lalb_Chr07g0180781 Lupinus albus HOM05D007669 ORTHO05D009624 2.0e-136 490.7 754 40.2
Oeu025206.1 Olea europaea HOM05D007669 ORTHO05D009624 2.0e-136 490.7 712 39.7
PGR044G0001 Punica granatum HOM05D007669 ORTHO05D009624 2.0e-136 490.7 769 39.1
Ca_21270_v3 Cicer arietinum L. HOM05D007669 ORTHO05D009624 9.9e-136 488.4 821 37.6
HanXRQChr09g0244441 Helianthus annuus HOM05D007669 ORTHO05D009624 1.2e-133 481.5 753 38.8
Migut.K00227 Erythranthe guttata HOM05D007669 ORTHO05D009624 1.7e-132 477.6 758 38.9
Prupe.1G068100 Prunus persica HOM05D007669 ORTHO05D009624 6.8e-129 465.7 614 42.5
SalBow1G4073 Salvia bowleyana HOM05D007669 ORTHO05D009624 2.2e-127 460.7 765 38.8
Aqoxy7G02932 Aquilegia oxysepala HOM05D007669 ORTHO05D009624 7.1e-126 455.7 774 39.3
FAN22G2123 Fragaria x ananassa HOM05D007669 ORTHO05D009624 8.7e-124 448.7 612 42.3
PSO170G1866 Papaver somniferum HOM05D007669 ORTHO05D009624 1.8e-121 441.0 780 36.7
PSO063G2993 Papaver somniferum HOM05D007669 ORTHO05D009624 5.3e-121 439.5 776 36.9
Lsat_1_v5_gn_7_54021 Lactuca sativa HOM05D007669 ORTHO05D009624 9.0e-121 438.7 707 38.6
SGA_v2.0_scaffold17G07944 Striga asiatica HOM05D007669 ORTHO05D009624 2.2e-119 434.1 748 38.4
CiPaw.08G030700 Carya illinoinensis HOM05D007669 ORTHO05D009624 3.8e-119 433.3 559 45.8
Cpa.g.sc115.51 Carica papaya HOM05D007669 ORTHO05D009624 9.3e-118 428.7 693 38.5
Lj2g0020468 Lotus japonicus HOM05D007669 ORTHO05D009624 2.1e-117 427.6 744 38.3
ATR0580G240 Amborella trichopoda HOM05D007669 ORTHO05D009624 4.8e-114 416.4 745 37.0
vmacro13101 Vaccinium macrocarpon HOM05D007669 ORTHO05D009624 1.4e-113 414.8 747 37.1
Glyma.17G056500 Glycine max HOM05D007669 ORTHO05D009624 1.5e-112 411.4 579 43.4
FvH4_4g06530 Fragaria vesca HOM05D007669 ORTHO05D009624 1.9e-110 404.4 523 43.4
MELO3C017409.2 Cucumis melo HOM05D007669 ORTHO05D009624 3.2e-110 403.7 681 37.3
ECA240G0205 Erigeron canadensis HOM05D007669 ORTHO05D009624 1.9e-107 394.4 667 36.1
AUR62027394 Chenopodium quinoa HOM05D007669 ORTHO05D009624 7.4e-107 392.5 438 48.2
VMungo1215G2771 Vigna mungo HOM05D007669 ORTHO05D009624 2.1e-106 391.0 936 31.3
Psat4g013920 Pisum sativum HOM05D007669 ORTHO05D009624 1.0e-103 382.1 555 41.8
Zm00001eb432590 Zea mays HOM05D007669 ORTHO05D009624 1.2e-101 375.2 728 33.9
MBI16_g09333_MAGBIO Magnolia biondii HOM05D007669 ORTHO05D009624 3.5e-101 373.6 507 43.8
Eucgr.D01099 Eucalyptus grandis HOM05D007669 ORTHO05D009624 2.8e-98 364.0 524 40.3
Hma1.2p1_0726F.1_g208990 Hydrangea macrophylla HOM05D007669 ORTHO05D009624 2.0e-96 357.8 558 41.0
HPP92_010780 Vanilla planifolia HOM05D007669 ORTHO05D009624 2.2e-87 327.8 494 39.9
Eucgr.D01111 Eucalyptus grandis HOM05D007669 ORTHO05D009624 4.1e-81 307.0 733 31.5
DCAR_017992 Daucus carota HOM05D007669 ORTHO05D009624 1.4e-76 292.0 499 37.7
Eucgr.L01386 Eucalyptus grandis HOM05D007669 ORTHO05D009624 5.1e-76 290.0 401 41.6
CsaV3_1G032070 Cucumis sativus L. HOM05D007669 ORTHO05D009624 1.3e-74 285.4 409 40.3
SEGI_13081 Sequoiadendron giganteum HOM05D007669 ORTHO05D009624 4.4e-67 260.4 591 31.8
CDE02G1706 Ceratophyllum demersum HOM05D007669 ORTHO05D009624 1.4e-65 255.4 739 28.7
Pp3c9_5530 Physcomitrium patens HOM05D007669 ORTHO05D009624 1.8e-65 255.0 741 28.7
AagrBONN_evm.TU.Sc2ySwM_117.3295 Anthoceros agrestis HOM05D007669 ORTHO05D009624 9.1e-65 252.7 761 28.1
Glyma.13G102601 Glycine max HOM05D007669 ORTHO05D009624 8.5e-63 246.1 442 37.8
Mapoly0147s0035 Marchantia polymorpha HOM05D007669 ORTHO05D009624 5.7e-51 206.8 860 25.0
SMO356G0293 Selaginella moellendorffii HOM05D007669 ORTHO05D009624 5.4e-49 200.3 540 30.7
SEGI_05703 Sequoiadendron giganteum HOM05D007669 ORTHO05D009624 1.2e-48 199.1 387 33.3
FAN12G2799 Fragaria x ananassa HOM05D007669 ORTHO05D009624 3.2e-41 174.5 253 39.5
Psat7g062600 Pisum sativum HOM05D007669 ORTHO05D009624 1.6e-29 135.6 149 45.0
Haze_22064 Corylus avellana HOM05D007669 ORTHO05D009624 2.1e-29 135.2 199 37.7
Glyma.13G102550 Glycine max HOM05D007669 ORTHO05D009624 1.3e-26 125.9 257 34.6
COL.COLO4_25058 Corchorus olitorius HOM05D007669 ORTHO05D009624 1.6e-24 119.0 163 40.5
Eucgr.D01101 Eucalyptus grandis HOM05D007669 ORTHO05D009624 6.6e-23 113.6 196 36.2
DCAR_017991 Daucus carota HOM05D007669 ORTHO05D009624 4.7e-21 107.5 199 30.2
Haze_22063 Corylus avellana HOM05D007669 ORTHO05D009624 7.6e-19 100.1 157 42.7
COL.COLO4_25059 Corchorus olitorius HOM05D007669 ORTHO05D009624 7.3e-14 83.6 140 40.0
Lj3A156T43 Lonicera japonica HOM05D007669 ORTHO05D009624 2.8e-13 81.6 147 40.8
SEGI_25409 Sequoiadendron giganteum HOM05D007669 ORTHO05D009624 3.1e-12 78.2 181 31.5
PRCOL_00006584 Prasinoderma coloniale HOM05D024043 ORTHO05D009624 1.9e-09 68.9 126 33.3
Cre07.g356600 Chlamydomonas reinhardtii HOM05D007669 ORTHO05D009624 4.2e-09 67.8 105 38.1
MCO10G383 Micromonas commoda HOM05D024043 ORTHO05D009624 2.7e-08 65.1 89 37.1
PRCOL_00001814 Prasinoderma coloniale HOM05D007669 ORTHO05D009624 2.7e-08 65.1 118 36.4
Mapoly0004s0046 Marchantia polymorpha HOM05D024043 ORTHO05D031244 7.8e-08 63.5 124 33.9
Pp3c25_1540 Physcomitrium patens HOM05D024043 ORTHO05D031244 1.0e-07 63.2 131 34.4
Psat4g139360 Pisum sativum HOM05D007669 ORTHO05D009624 1.7e-07 62.4 117 37.6
Os04g0659150 Oryza sativa ssp. japonica HOM05D007669 ORTHO05D009624 1.9e-06 58.9 147 33.3
HPP92_010781 Vanilla planifolia HOM05D007669 ORTHO05D009624 9.6e-06 56.6 136 34.6


User provided reference genes

Program Settings