Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc13g0007740 Simmondsia chinensis HOM05D004909 ORTHO05D009316 0.0e+00 1304.7 675 100.0
Actinidia34900 Actinidia chinensis HOM05D004909 ORTHO05D009316 6.2e-299 1030.4 934 62.8
TWI14G0838 Tripterygium wilfordii HOM05D004909 ORTHO05D009316 3.0e-205 719.2 400 90.2
SHI34934 Sapria himalayana HOM05D004909 ORTHO05D009316 1.5e-143 514.2 587 51.1
Sed0005050 Sechium edule HOM05D004909 ORTHO05D009316 6.5e-139 498.8 861 38.8
EL10Ac7g16726 Beta vulgaris HOM05D004909 ORTHO05D009316 2.6e-119 433.7 841 35.1
Sed0007601 Sechium edule HOM05D004909 ORTHO05D009316 2.0e-116 424.1 732 38.8
SEGI_22240 Sequoiadendron giganteum HOM05D004909 ORTHO05D009316 1.2e-111 408.3 825 33.9
THA.LOC109116692 Tarenaya hassleriana HOM05D004909 ORTHO05D009316 2.8e-110 403.7 249 80.7
Glyma.15G187700 Glycine max HOM05D004909 ORTHO05D009316 5.0e-107 392.9 455 49.7
AUR62042355 Chenopodium quinoa HOM05D004909 ORTHO05D009316 8.5e-107 392.1 834 33.5
AUR62043789 Chenopodium quinoa HOM05D004909 ORTHO05D009316 8.5e-107 392.1 834 33.5
AUR62043900 Chenopodium quinoa HOM05D004909 ORTHO05D009316 8.5e-107 392.1 834 33.5
EL10Ac1g02201 Beta vulgaris HOM05D004909 ORTHO05D009316 5.5e-106 389.4 892 32.6
SHI35584 Sapria himalayana HOM05D004909 ORTHO05D009316 1.4e-104 384.8 610 41.6
DCAR_032462 Daucus carota HOM05D004909 ORTHO05D009316 1.7e-91 341.3 513 39.0
AUR62026823 Chenopodium quinoa HOM05D004909 ORTHO05D009316 1.2e-89 335.1 372 48.4
RcHm_v2.0_Chr6g0256721 Rosa chinensis HOM05D006604 ORTHO05D007974 1.9e-82 311.2 410 43.4
HPP92_026900 Vanilla planifolia HOM05D004909 ORTHO05D009316 1.8e-80 304.7 393 48.3
Hma1.2p1_0003F.1_g003590 Hydrangea macrophylla HOM05D004909 ORTHO05D009316 4.9e-78 296.6 181 82.3
AUR62042351 Chenopodium quinoa HOM05D004909 ORTHO05D009316 1.1e-74 285.4 480 38.1
Aqoxy2G02244 Aquilegia oxysepala HOM05D004909 ORTHO05D009316 1.7e-67 261.5 447 36.7
Aqoxy3G01127 Aquilegia oxysepala HOM05D004909 ORTHO05D009316 1.7e-67 261.5 447 36.7
vmacro17405 Vaccinium macrocarpon HOM05D004909 ORTHO05D009316 3.4e-63 247.3 159 79.9
Peaxi162Scf00651g00626 Petunia axillaris HOM05D004909 ORTHO05D009316 4.7e-57 226.9 435 34.5
Lalb_Chr00c21g0405621 Lupinus albus HOM05D004909 ORTHO05D009316 6.9e-56 223.0 192 54.2
Sed0025836 Sechium edule HOM05D004909 ORTHO05D009316 2.0e-55 221.5 483 34.8
Nitab4.5_0010033g0040 Nicotiana tabacum HOM05D004909 ORTHO05D009316 4.4e-55 220.3 286 43.4
Oeu050988.1 Olea europaea HOM05D004909 ORTHO05D009625 7.8e-52 209.5 533 31.7
Oeu050987.1 Olea europaea HOM05D004909 ORTHO05D009625 1.3e-43 182.2 349 36.7
Lj2A1227T106 Lonicera japonica HOM05D004909 ORTHO05D009316 7.4e-42 176.4 143 60.1
Nitab4.5_0004300g0260 Nicotiana tabacum HOM05D004909 ORTHO05D009316 3.7e-41 174.1 173 52.6
EL10Ac7g16568 Beta vulgaris HOM05D004909 ORTHO05D009316 1.8e-40 171.8 116 75.0
AUR62043914 Chenopodium quinoa HOM05D000533 ORTHO05D001069 2.4e-40 171.4 247 43.7
SHI44820 Sapria himalayana HOM05D004909 ORTHO05D009316 2.0e-39 168.3 116 74.1
EL10As18g24157 Beta vulgaris HOM05D004909 ORTHO05D009316 2.6e-39 167.9 96 85.4
Oeu057349.1 Olea europaea HOM05D013539 ORTHO05D014921 3.4e-39 167.5 115 73.9
Cc00_g01790 Coffea canephora HOM05D004909 ORTHO05D009316 9.9e-39 166.0 119 66.4
arahy.Tifrunner.gnm1.ann1.HS2KB4 Arachis hypogaea HOM05D004909 ORTHO05D009316 1.9e-34 151.8 101 81.2
Peaxi162Scf00456g00034 Petunia axillaris HOM05D004909 ORTHO05D009316 2.5e-34 151.4 296 34.8
AUR62042356 Chenopodium quinoa HOM05D004909 ORTHO05D009316 5.6e-34 150.2 282 36.9
Nitab4.5_0001526g0140 Nicotiana tabacum HOM05D004909 ORTHO05D009316 1.1e-32 146.0 227 40.1
AUR62022155 Chenopodium quinoa HOM05D005031 ORTHO05D006098 4.5e-31 140.6 183 44.3
Lalb_Chr11g0070061 Lupinus albus HOM05D004909 ORTHO05D009316 4.5e-31 140.6 115 55.7
Peaxi162Scf00625g00037 Petunia axillaris HOM05D002660 ORTHO05D003902 1.9e-29 135.2 459 29.8
SHI44822 Sapria himalayana HOM05D004909 ORTHO05D009316 4.6e-28 130.6 90 75.6
CAN.G505.9 Capsicum annuum HOM05D004909 ORTHO05D009316 5.1e-27 127.1 139 47.5
CAN.G7.24 Capsicum annuum HOM05D004909 ORTHO05D009316 7.4e-26 123.2 114 49.1
Ah.10g028110 Amaranthus hybridus HOM05D004909 ORTHO05D009316 9.7e-26 122.9 117 49.6
CsaV3_UNG209050 Cucumis sativus L. HOM05D004909 ORTHO05D009316 6.9e-24 116.7 102 52.9
arahy.Tifrunner.gnm1.ann1.0IJH8U Arachis hypogaea HOM05D012997 ORTHO05D014434 1.2e-23 115.9 62 91.9
AUR62043915 Chenopodium quinoa HOM05D004909 ORTHO05D009316 2.0e-23 115.2 198 40.4
EL10Ac1g01432 Beta vulgaris HOM05D004909 ORTHO05D009316 2.6e-23 114.8 157 42.0
AUR62030242 Chenopodium quinoa HOM05D004909 ORTHO05D009316 3.4e-23 114.4 198 39.9
PGR044G0991 Punica granatum HOM05D004909 ORTHO05D009316 1.0e-22 112.8 172 42.4
AUR62029835 Chenopodium quinoa HOM05D004909 ORTHO05D009316 2.2e-22 111.7 198 39.4
Nitab4.5_0000580g0100 Nicotiana tabacum HOM05D004909 ORTHO05D009316 5.0e-22 110.5 111 51.4
EL10Ac1g01431 Beta vulgaris HOM05D004909 ORTHO05D009316 2.5e-21 108.2 135 38.5
Nitab4.5_0001681g0080 Nicotiana tabacum HOM05D004909 ORTHO05D009316 2.5e-21 108.2 116 47.4
AUR62044035 Chenopodium quinoa HOM05D004909 ORTHO05D009316 4.2e-21 107.5 131 41.2
Nitab4.5_0000081g0150 Nicotiana tabacum HOM05D004909 ORTHO05D009625 3.6e-20 104.4 231 32.5
CAN.G1858.5 Capsicum annuum HOM05D004909 ORTHO05D009316 6.1e-20 103.6 336 28.3
EL10Ac1g01434 Beta vulgaris HOM05D004909 ORTHO05D009316 1.0e-19 102.8 213 34.7
EL10Ac7g17805 Beta vulgaris HOM05D004909 ORTHO05D009316 1.0e-19 102.8 213 34.7
Sc02g0004080 Simmondsia chinensis HOM05D004909 ORTHO05D009316 1.4e-19 102.4 134 42.5
AUR62037530 Chenopodium quinoa HOM05D004909 ORTHO05D009316 1.8e-19 102.1 127 44.1
CAN.G505.15 Capsicum annuum HOM05D004909 ORTHO05D009316 5.1e-19 100.5 164 36.6
Potri.007G061821 Populus trichocarpa HOM05D004909 ORTHO05D009316 2.5e-18 98.2 192 33.3
CAN.G505.10 Capsicum annuum HOM05D004909 ORTHO05D009316 4.3e-18 97.4 110 44.5
Peaxi162Scf00456g00033 Petunia axillaris HOM05D004909 ORTHO05D009316 7.4e-18 96.7 110 49.1
AUR62043791 Chenopodium quinoa HOM05D004909 ORTHO05D009316 9.7e-18 96.3 105 51.4
AUR62043902 Chenopodium quinoa HOM05D004909 ORTHO05D009316 9.7e-18 96.3 105 51.4
ClCG05G022450 Citrullus lanatus HOM05D004909 ORTHO05D009316 1.7e-17 95.5 68 67.6
Nitab4.5_0000351g0260 Nicotiana tabacum HOM05D004909 ORTHO05D009316 1.1e-16 92.8 85 55.3
Lalb_Chr00c21g0405631 Lupinus albus HOM05D004909 ORTHO05D009316 9.1e-16 89.7 202 30.2
Solyc03g013470.1 Solanum lycopersicum HOM05D004909 ORTHO05D009316 4.5e-15 87.4 70 57.1
AUR62026824 Chenopodium quinoa HOM05D000533 ORTHO05D001069 1.3e-14 85.9 90 50.0
CAN.G14.29 Capsicum annuum HOM05D004909 ORTHO05D009316 1.2e-12 79.3 96 42.7
CAN.G733.11 Capsicum annuum HOM05D004909 ORTHO05D009316 4.7e-12 77.4 84 45.2
COL.COLO4_04384 Corchorus olitorius HOM05D004909 ORTHO05D009316 3.9e-11 74.3 43 79.1
Oeu022816.1 Olea europaea HOM05D004909 ORTHO05D009316 3.9e-11 74.3 110 40.0
Sopen05g027060 Solanum pennellii HOM05D000213 ORTHO05D011567 5.1e-11 73.9 180 31.1
Nitab4.5_0000580g0140 Nicotiana tabacum HOM05D004909 ORTHO05D009316 8.8e-11 73.2 77 45.5
Nitab4.5_0003083g0030 Nicotiana tabacum HOM05D004909 ORTHO05D009316 8.2e-09 66.6 95 35.8
HPP92_026268 Vanilla planifolia HOM05D004909 ORTHO05D009316 8.2e-09 66.6 66 50.0
Solyc00g500345.1 Solanum lycopersicum HOM05D000743 ORTHO05D000580 7.0e-08 63.5 77 42.9
Sopen07g004960 Solanum pennellii HOM05D000890 ORTHO05D000697 2.0e-07 62.0 51 58.8
Solyc05g045890.1 Solanum lycopersicum HOM05D004909 ORTHO05D009625 5.9e-07 60.5 203 27.6
unitig_87.g28025 Utricularia gibba HOM05D004909 ORTHO05D009316 7.7e-07 60.1 149 25.5


User provided reference genes

Program Settings