Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc13g0007430 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.2e-82 309.7 150 100.0
Sc02g0004970 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.9e-47 191.4 141 64.5
Sc12g0007100 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.1e-46 190.3 146 67.1
Sc08g0005440 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.2e-38 162.2 130 63.1
Sc24g0001190 Simmondsia chinensis HOM05D007912 ORTHO05D010251 9.3e-38 160.6 129 60.5
Sc11g0004150 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.5e-37 158.7 111 70.3
Sc14g0002490 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.3e-36 156.8 121 62.8
Sc17g0003520 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.3e-36 156.8 113 67.3
Sc01g0006550 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.3e-36 156.0 137 61.3
Sc05g0005050 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.9e-36 155.2 109 67.0
Sc07g0004510 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.7e-36 154.5 133 61.7
Sc17g0003150 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.3e-35 152.1 158 54.4
Sc06g0004250 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.3e-35 151.8 112 66.1
Sc05g0004480 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.4e-33 146.7 106 68.9
Sc24g0001130 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.9e-33 144.4 112 66.1
Sc22g0004320 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.4e-32 142.1 109 67.9
Sc03g0004300 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.8e-32 141.4 112 62.5
Sc23g0003790 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.9e-30 136.3 112 61.6
Sc05g0005690 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.2e-30 135.2 112 62.5
Sc05g0004430 Simmondsia chinensis HOM05D007912 ORTHO05D010251 7.1e-30 134.4 102 64.7
Sc17g0003130 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.0e-29 131.3 110 60.0
Sc18g0005300 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.9e-27 126.3 103 65.0
Sc15g0002320 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.5e-27 125.9 91 69.2
Sc13g0008210 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.3e-27 125.2 86 72.1
Sc01g0005460 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.7e-26 122.1 97 68.0
Sc02g0004980 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.2e-26 121.3 90 66.7
Sc03g0005210 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.5e-24 116.7 114 54.4
Sc02g0004890 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.1e-22 110.5 82 68.3
Sc14g0004880 Simmondsia chinensis HOM05D007912 ORTHO05D010251 7.1e-22 107.8 83 65.1
Sc04g0004840 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.6e-21 106.7 91 61.5
Sc10g0007130 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.3e-20 102.8 106 51.9
Sc21g0003860 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.9e-20 102.1 112 50.9
Sc24g0001220 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.1e-19 100.5 100 55.0
Sc02g0005760 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.5e-19 100.1 82 63.4
Sc20g0002780 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.5e-19 100.1 82 63.4
Sc02g0004160 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.3e-19 98.6 70 64.3
Sc22g0004270 Simmondsia chinensis HOM05D007912 ORTHO05D010251 4.3e-19 98.6 85 57.6
Sc22g0004420 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.3e-18 97.1 82 59.8
Sc08g0004760 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.7e-18 95.5 66 63.6
Sc26g0003020 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.4e-17 93.6 82 59.8
Sc10g0007340 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.3e-17 91.7 69 58.0
Sc17g0002860 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.9e-17 91.3 75 56.0
Sabra13G0012400 Salix brachista HOM05D020966 ORTHO05D010251 3.4e-16 89.0 96 44.8
Sc08g0005480 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.4e-16 89.0 53 75.5
Sc02g0005270 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.9e-16 88.2 82 56.1
Sc02g0004810 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.3e-15 87.0 95 49.5
Sc01g0005490 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.7e-15 86.7 71 53.5
Sc02g0004480 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.7e-15 86.7 68 67.6
Sc01g0006390 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.9e-15 85.9 66 57.6
Sc01g0006690 Simmondsia chinensis HOM05D007912 ORTHO05D010251 5.0e-15 85.1 67 62.7
Sc07g0005080 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.4e-14 83.6 69 60.9
Sc05g0004680 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.6e-13 80.1 85 47.1
Sc17g0003650 Simmondsia chinensis HOM05D007912 ORTHO05D010251 2.1e-13 79.7 74 52.7
Sc11g0004270 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.9e-11 73.2 79 44.3
Nitab4.5_0001698g0060 Nicotiana tabacum HOM05D008778 ORTHO05D003639 9.7e-11 70.9 89 37.1
Peaxi162Scf00820g00119 Petunia axillaris HOM05D008778 ORTHO05D003639 8.2e-10 67.8 91 36.3
Nitab4.5_0006587g0010 Nicotiana tabacum HOM05D008778 ORTHO05D003639 6.9e-09 64.7 89 34.8
Sc11g0004200 Simmondsia chinensis HOM05D007912 ORTHO05D010251 6.9e-09 64.7 57 56.1
Peaxi162Scf00820g00117 Petunia axillaris HOM05D008778 ORTHO05D003639 9.1e-09 64.3 122 30.3
Sc12g0008150 Simmondsia chinensis HOM05D007912 ORTHO05D010251 9.1e-09 64.3 55 58.2
Sc05g0004290 Simmondsia chinensis HOM05D007912 ORTHO05D010251 1.2e-08 63.9 65 52.3
Nitab4.5_0007634g0020 Nicotiana tabacum HOM05D008778 ORTHO05D003639 1.5e-08 63.5 90 33.3
Nitab4.5_0000663g0030 Nicotiana tabacum HOM05D008778 ORTHO05D003639 2.6e-08 62.8 90 34.4
QL01p013702 Quercus lobata HOM05D009149 ORTHO05D003639 4.5e-08 62.0 137 27.7
Nitab4.5_0001698g0030 Nicotiana tabacum HOM05D008778 ORTHO05D003639 5.9e-08 61.6 90 33.3
Sopen09g003890 Solanum pennellii HOM05D000006 ORTHO05D000001 7.7e-08 61.2 90 32.2
Nitab4.5_0000663g0010 Nicotiana tabacum HOM05D008778 ORTHO05D003639 1.0e-07 60.8 90 33.3
Sc03g0004870 Simmondsia chinensis HOM05D007912 ORTHO05D010251 3.8e-07 58.9 52 55.8
Nitab4.5_0001698g0040 Nicotiana tabacum HOM05D008778 ORTHO05D003639 6.5e-07 58.2 87 34.5
FvH4_1g21382 Fragaria vesca HOM05D016497 ORTHO05D019154 8.5e-07 57.8 97 32.0
Sopen09g003880 Solanum pennellii HOM05D008778 ORTHO05D003639 1.1e-06 57.4 90 31.1
PGSC0003DMG400002681 Solanum tuberosum HOM05D008778 ORTHO05D003639 1.4e-06 57.0 87 34.5
Peaxi162Scf00820g00045 Petunia axillaris HOM05D008778 ORTHO05D003639 3.2e-06 55.8 82 32.9
RcHm_v2.0_Chr2g0121071 Rosa chinensis HOM05D008702 ORTHO05D003639 9.4e-06 54.3 85 35.3
RcHm_v2.0_Chr2g0152981 Rosa chinensis HOM05D008702 ORTHO05D003639 9.4e-06 54.3 84 36.9
RcHm_v2.0_Chr5g0004321 Rosa chinensis HOM05D008702 ORTHO05D003639 9.4e-06 54.3 85 32.9


User provided reference genes

Program Settings