Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc13g0006460 Simmondsia chinensis HOM05D007370 ORTHO05D009394 1.3e-238 829.3 412 100.0
Dinv15168 Davidia involucrata HOM05D007370 ORTHO05D009394 1.4e-157 560.1 421 69.4
CiPaw.01G138600 Carya illinoinensis HOM05D007370 ORTHO05D009394 3.6e-156 555.4 418 66.7
Haze_01298 Corylus avellana HOM05D007370 ORTHO05D009394 4.6e-156 555.1 405 68.4
Rhsim02G0003800 Rhododendron simsii HOM05D007370 ORTHO05D009394 8.8e-155 550.8 422 67.3
Prupe.1G117500 Prunus persica HOM05D007370 ORTHO05D009394 2.0e-154 549.7 419 65.2
Atru.chr4.3000 Acer truncatum HOM05D007370 ORTHO05D009394 3.3e-154 548.9 412 68.7
Duzib052G0732 Durio zibethinus HOM05D007370 ORTHO05D009394 2.2e-153 546.2 412 67.5
Thecc.04G300700 Theobroma cacao HOM05D007370 ORTHO05D009394 6.3e-153 544.7 413 66.8
Manes.15G004200 Manihot esculenta HOM05D007370 ORTHO05D009394 1.8e-152 543.1 420 65.2
EL10Ac3g05507 Beta vulgaris HOM05D007370 ORTHO05D009394 3.4e-151 538.9 419 66.3
Gohir.A01G034400 Gossypium hirsutum HOM05D007370 ORTHO05D009394 1.3e-150 537.0 417 65.5
FvH4_4g19730 Fragaria vesca HOM05D007370 ORTHO05D009394 8.5e-150 534.3 418 65.3
Medtr2g034140 Medicago truncatula HOM05D007370 ORTHO05D009394 8.5e-150 534.3 426 67.1
COL.COLO4_34615 Corchorus olitorius HOM05D007370 ORTHO05D009394 1.1e-149 533.9 409 66.5
CsaV3_6G022350 Cucumis sativus L. HOM05D007370 ORTHO05D009394 2.5e-149 532.7 419 66.6
FAN07G1244 Fragaria x ananassa HOM05D007370 ORTHO05D009394 2.5e-149 532.7 420 64.5
Glyma.09G035700 Glycine max HOM05D007370 ORTHO05D009394 7.2e-149 531.2 392 69.6
Eucgr.A00294 Eucalyptus grandis HOM05D007370 ORTHO05D009394 1.2e-148 530.4 424 63.7
TPR.G27253 Trifolium pratense HOM05D007370 ORTHO05D009394 1.6e-148 530.0 421 67.5
Cc03_g00820 Coffea canephora HOM05D007370 ORTHO05D009394 2.1e-148 529.6 421 64.8
PGR142G3192 Punica granatum HOM05D007370 ORTHO05D009394 2.1e-148 529.6 418 64.6
Lj6g0027049 Lotus japonicus HOM05D007370 ORTHO05D009394 7.9e-148 527.7 426 66.4
MBI18_g37561_MAGBIO Magnolia biondii HOM05D007370 ORTHO05D009394 7.9e-148 527.7 433 64.2
RcHm_v2.0_Chr4g0425231 Rosa chinensis HOM05D007370 ORTHO05D009394 1.0e-147 527.3 415 64.8
Nn6g33643 Nelumbo nucifera HOM05D007370 ORTHO05D009394 3.0e-147 525.8 417 65.9
VMungo0540G1057 Vigna mungo HOM05D007370 ORTHO05D009394 6.7e-147 524.6 398 68.6
Psat1g161680 Pisum sativum HOM05D007370 ORTHO05D009394 2.0e-146 523.1 424 66.0
Potri.010G145700 Populus trichocarpa HOM05D007370 ORTHO05D009394 7.4e-146 521.2 414 63.3
Gorai.002G030100 Gossypium raimondii HOM05D007370 ORTHO05D009394 9.7e-146 520.8 439 62.2
Phvul.006G118000 Phaseolus vulgaris HOM05D007370 ORTHO05D009394 9.7e-146 520.8 416 66.8
arahy.Tifrunner.gnm1.ann1.VHF2FI Arachis hypogaea HOM05D007370 ORTHO05D009394 2.8e-145 519.2 411 66.2
arahy.Tifrunner.gnm1.ann1.HMTG6S Arachis hypogaea HOM05D007370 ORTHO05D009394 4.8e-145 518.5 414 65.9
Sed0008389 Sechium edule HOM05D007370 ORTHO05D009394 4.1e-144 515.4 428 63.6
MD16G1154200 Malus domestica HOM05D007370 ORTHO05D009394 2.0e-143 513.1 420 64.0
TAR362G0601 Trochodendron aralioides HOM05D007370 ORTHO05D009394 5.9e-143 511.5 422 63.3
DCAR_002511 Daucus carota HOM05D007370 ORTHO05D009394 1.9e-141 506.5 419 63.7
AUR62039281 Chenopodium quinoa HOM05D007370 ORTHO05D009394 4.2e-141 505.4 406 65.5
Sopen12g033950 Solanum pennellii HOM05D007370 ORTHO05D009394 1.4e-139 500.4 420 60.2
Migut.G00060 Erythranthe guttata HOM05D007370 ORTHO05D009394 2.3e-139 499.6 415 60.7
Lalb_Chr20g0120861 Lupinus albus HOM05D007370 ORTHO05D009394 4.0e-139 498.8 394 67.0
AUR62016207 Chenopodium quinoa HOM05D007370 ORTHO05D009394 5.2e-139 498.4 379 67.3
QL06p012270 Quercus lobata HOM05D007370 ORTHO05D009394 1.3e-137 493.8 360 69.2
Lj6A691G74 Lonicera japonica HOM05D007370 ORTHO05D009394 8.2e-137 491.1 441 59.9
Solyc12g099270.2 Solanum lycopersicum HOM05D007370 ORTHO05D009394 7.7e-135 484.6 421 59.9
PGSC0003DMG400004697 Solanum tuberosum HOM05D007370 ORTHO05D009394 1.7e-134 483.4 420 59.0
ECA248G2723 Erigeron canadensis HOM05D007370 ORTHO05D009394 6.5e-134 481.5 421 59.9
HanXRQChr01g0030981 Helianthus annuus HOM05D007370 ORTHO05D009394 1.1e-133 480.7 414 59.4
SalBow8G4515 Salvia bowleyana HOM05D007370 ORTHO05D009394 1.1e-133 480.7 411 59.6
CAN.G484.61 Capsicum annuum HOM05D007370 ORTHO05D009394 7.2e-133 478.0 420 59.0
ATR0693G166 Amborella trichopoda HOM05D007370 ORTHO05D009394 2.1e-132 476.5 391 63.2
Peaxi162Scf00120g00023 Petunia axillaris HOM05D007370 ORTHO05D009394 3.6e-132 475.7 393 61.6
CDE08G1199 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 9.8e-130 467.6 417 59.0
arahy.Tifrunner.gnm1.ann1.DXY8A4 Arachis hypogaea HOM05D007370 ORTHO05D009394 1.2e-127 460.7 450 57.6
Nitab4.5_0002150g0160 Nicotiana tabacum HOM05D007370 ORTHO05D009394 1.2e-127 460.7 415 58.8
Nitab4.5_0002294g0020 Nicotiana tabacum HOM05D007370 ORTHO05D009394 1.0e-126 457.6 413 57.1
Zm00001eb356360 Zea mays HOM05D007370 ORTHO05D009394 1.3e-126 457.2 371 62.8
unitig_37.g12412 Utricularia gibba HOM05D007370 ORTHO05D009394 1.0e-123 447.6 406 57.4
Hund11933 Selenicereus undatus HOM05D007370 ORTHO05D009394 1.5e-122 443.7 451 55.0
Os05g0157300 Oryza sativa ssp. japonica HOM05D007370 ORTHO05D009394 2.8e-121 439.5 370 61.6
FAN12G3716 Fragaria x ananassa HOM05D007370 ORTHO05D009394 3.7e-121 439.1 418 56.9
Sabra10G0112300 Salix brachista HOM05D007370 ORTHO05D009394 4.9e-121 438.7 343 64.7
SEGI_11896 Sequoiadendron giganteum HOM05D007370 ORTHO05D009394 2.7e-119 433.0 413 55.7
TWI09G1560 Tripterygium wilfordii HOM05D007370 ORTHO05D009394 5.9e-119 431.8 425 54.8
Ah.04g156700 Amaranthus hybridus HOM05D007370 ORTHO05D009394 7.7e-119 431.4 420 56.7
Lsat_1_v5_gn_1_41060 Lactuca sativa HOM05D007370 ORTHO05D009394 1.5e-114 417.2 341 62.5
CSS0048431 Camellia sinensis var. sinensis HOM05D007370 ORTHO05D009394 1.3e-110 404.1 307 66.1
Gohir.D01G023538 Gossypium hirsutum HOM05D007370 ORTHO05D009394 6.8e-107 391.7 297 66.3
MELO3C021271.2 Cucumis melo HOM05D007370 ORTHO05D009394 6.4e-105 385.2 304 65.1
arahy.Tifrunner.gnm1.ann1.CV4FMG Arachis hypogaea HOM05D007370 ORTHO05D009394 3.3e-101 372.9 330 60.3
Peaxi162Scf01160g00001 Petunia axillaris HOM05D007370 ORTHO05D009394 2.1e-100 370.2 373 54.4
vmacro15182 Vaccinium macrocarpon HOM05D007370 ORTHO05D009394 1.5e-98 364.0 289 64.4
Pp3c14_3570 Physcomitrium patens HOM05D007370 ORTHO05D009394 6.0e-95 352.1 409 48.4
Cpa.g.sc9.57 Carica papaya HOM05D007370 ORTHO05D009394 5.1e-94 349.0 284 60.9
CBR_g50285 Chara braunii HOM05D007370 ORTHO05D009394 2.1e-92 343.6 411 46.0
AagrBONN_evm.TU.Sc2ySwM_228.2788 Anthoceros agrestis HOM05D007370 ORTHO05D009394 2.2e-89 333.6 355 52.4
Mapoly0007s0102 Marchantia polymorpha HOM05D007370 ORTHO05D009394 1.4e-88 330.9 307 54.1
ClCG06G004600 Citrullus lanatus HOM05D007370 ORTHO05D009394 4.1e-88 329.3 442 45.0
SGA_v2.0_scaffold104G30077 Striga asiatica HOM05D007370 ORTHO05D009394 3.8e-81 306.2 397 44.8
Eucgr.A00046 Eucalyptus grandis HOM05D007370 ORTHO05D009394 4.2e-80 302.8 197 72.6
GSVIVG01034991001 Vitis vinifera HOM05D007370 ORTHO05D009394 8.1e-76 288.5 206 68.4
SMO145G0205 Selaginella moellendorffii HOM05D007370 ORTHO05D009394 3.2e-72 276.6 384 42.2
HPP92_027782 Vanilla planifolia HOM05D007370 ORTHO05D009394 6.0e-71 272.3 210 62.9
Mapoly0007s0137 Marchantia polymorpha HOM05D007370 ORTHO05D009394 5.3e-67 259.2 442 37.3
Ca_03237_v3 Cicer arietinum L. HOM05D007370 ORTHO05D009394 5.5e-64 249.2 193 69.4
Hund11975 Selenicereus undatus HOM05D007370 ORTHO05D009394 1.5e-61 241.1 238 55.0
QL06p020122 Quercus lobata HOM05D007370 ORTHO05D009394 3.4e-58 229.9 278 50.0
Glyma.15G140501 Glycine max HOM05D007370 ORTHO05D009394 2.5e-53 213.8 187 59.4
vmacro15183 Vaccinium macrocarpon HOM05D007370 ORTHO05D009394 7.9e-47 192.2 133 75.2
arahy.Tifrunner.gnm1.ann1.Y96K7L Arachis hypogaea HOM05D007370 ORTHO05D009394 9.0e-43 178.7 132 62.1
CDE02G4406 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 8.5e-33 145.6 114 64.9
Ca_00981_v3 Cicer arietinum L. HOM05D007370 ORTHO05D009394 2.3e-30 137.5 128 60.9
MD13G1153900 Malus domestica HOM05D007370 ORTHO05D009394 6.3e-28 129.4 107 65.4
HPP92_027781 Vanilla planifolia HOM05D007370 ORTHO05D009394 2.2e-25 120.9 129 49.6
Actinidia14258 Actinidia chinensis HOM05D001648 ORTHO05D001657 1.9e-24 117.9 111 56.8
Oeu001173.1 Olea europaea HOM05D007370 ORTHO05D009394 3.7e-20 103.6 123 46.3
Mapoly0007s0289 Marchantia polymorpha HOM05D007370 ORTHO05D009394 1.1e-16 92.0 74 56.8
Mapoly0252s0002 Marchantia polymorpha HOM05D007370 ORTHO05D009394 1.1e-16 92.0 74 56.8
Glyma.18G184250 Glycine max HOM05D007370 ORTHO05D009394 8.0e-15 85.9 65 63.1
Potri.008G105401 Populus trichocarpa HOM05D007370 ORTHO05D009394 8.0e-15 85.9 104 49.0
arahy.Tifrunner.gnm1.ann1.ZDLG37 Arachis hypogaea HOM05D004051 ORTHO05D004480 5.4e-11 73.2 53 71.7
FAN12G2956 Fragaria x ananassa HOM05D007370 ORTHO05D009394 4.5e-10 70.1 63 63.5
CDE02G2864 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 7.7e-10 69.3 55 60.0
MD13G1154300 Malus domestica HOM05D007370 ORTHO05D009394 1.7e-09 68.2 39 87.2
SEGI_23244 Sequoiadendron giganteum HOM05D007370 ORTHO05D009394 1.4e-06 58.5 62 54.8


User provided reference genes

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