Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc13g0005530 Simmondsia chinensis HOM05D000051 ORTHO05D000015 1.9e-101 372.5 185 100.0
Sc13g0005650 Simmondsia chinensis HOM05D000051 ORTHO05D000015 1.0e-30 137.5 127 56.7
Sc13g0005430 Simmondsia chinensis HOM05D000051 ORTHO05D000015 1.1e-29 134.0 127 54.3
Sc13g0005510 Simmondsia chinensis HOM05D000051 ORTHO05D000015 2.6e-29 132.9 125 49.6
Sc13g0005680 Simmondsia chinensis HOM05D000051 ORTHO05D000015 4.4e-29 132.1 174 44.8
Sc13g0005440 Simmondsia chinensis HOM05D000051 ORTHO05D000015 2.8e-28 129.4 127 53.5
Sc13g0005630 Simmondsia chinensis HOM05D000051 ORTHO05D000015 8.2e-28 127.9 128 53.1
Sc13g0005570 Simmondsia chinensis HOM05D000051 ORTHO05D000015 6.5e-25 118.2 126 49.2
Sc07g0006550 Simmondsia chinensis HOM05D000051 ORTHO05D000015 7.2e-24 114.8 128 50.8
Sc07g0006530 Simmondsia chinensis HOM05D000051 ORTHO05D000015 7.5e-21 104.8 151 41.1
Sc24g0001550 Simmondsia chinensis HOM05D000051 ORTHO05D000015 2.2e-20 103.2 115 50.4
Sc13g0005620 Simmondsia chinensis HOM05D000051 ORTHO05D000015 2.0e-18 96.7 150 39.3
Sc13g0005350 Simmondsia chinensis HOM05D000051 ORTHO05D000015 2.6e-13 79.7 72 52.8
Sc19g0000250 Simmondsia chinensis HOM05D000051 ORTHO05D000015 7.5e-13 78.2 122 38.5
QL05p062669 Quercus lobata HOM05D000051 ORTHO05D000015 1.6e-10 70.5 122 36.1
Sc13g0005740 Simmondsia chinensis HOM05D000051 ORTHO05D000015 2.0e-10 70.1 124 38.7
AUR62038426 Chenopodium quinoa HOM05D002461 ORTHO05D000898 7.7e-10 68.2 174 29.3
Lj3C73G19 Lonicera japonica HOM05D000051 ORTHO05D014235 2.3e-09 66.6 169 29.0
Dinv17489 Davidia involucrata HOM05D000051 ORTHO05D000015 5.0e-09 65.5 118 35.6
Sc13g0005730 Simmondsia chinensis HOM05D000051 ORTHO05D000015 8.6e-09 64.7 128 35.2
AUR62009188 Chenopodium quinoa HOM05D000051 ORTHO05D004973 1.5e-08 63.9 152 33.6
RcHm_v2.0_Chr1g0363171 Rosa chinensis HOM05D000051 ORTHO05D000015 1.9e-08 63.5 146 32.2
Dinv17488 Davidia involucrata HOM05D000051 ORTHO05D000015 2.5e-08 63.2 127 36.2
Rhsim07G0063700 Rhododendron simsii HOM05D000051 ORTHO05D000015 2.5e-08 63.2 162 29.6
Dinv38189 Davidia involucrata HOM05D000051 ORTHO05D000015 3.2e-08 62.8 142 29.6
Dinv17487 Davidia involucrata HOM05D000051 ORTHO05D000015 4.2e-08 62.4 127 36.2
Medtr5g058100 Medicago truncatula HOM05D000051 ORTHO05D000015 5.5e-08 62.0 127 31.5
Dinv21722 Davidia involucrata HOM05D000051 ORTHO05D000015 7.2e-08 61.6 131 37.4
QL08p019881 Quercus lobata HOM05D000051 ORTHO05D000015 7.2e-08 61.6 133 29.3
Dinv17485 Davidia involucrata HOM05D000051 ORTHO05D000015 9.5e-08 61.2 127 35.4
Sc13g0005550 Simmondsia chinensis HOM05D000051 ORTHO05D000015 9.5e-08 61.2 69 46.4
Actinidia06264 Actinidia chinensis HOM05D000051 ORTHO05D000015 1.2e-07 60.8 127 35.4
FAN25G1937 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.2e-07 60.8 122 32.8
Lj1A868G40 Lonicera japonica HOM05D000051 ORTHO05D000015 1.2e-07 60.8 125 30.4
Dinv17490 Davidia involucrata HOM05D000051 ORTHO05D000015 1.6e-07 60.5 118 34.7
FvH4_3g33400 Fragaria vesca HOM05D000051 ORTHO05D000015 1.6e-07 60.5 122 32.8
FAN06G3565 Fragaria x ananassa HOM05D000051 ORTHO05D000015 1.6e-07 60.5 103 38.8
QL08p019904 Quercus lobata HOM05D000051 ORTHO05D000015 1.6e-07 60.5 135 28.1
AUR62020512 Chenopodium quinoa HOM05D000051 ORTHO05D000015 2.1e-07 60.1 126 33.3
QL08p019859 Quercus lobata HOM05D000051 ORTHO05D000015 2.1e-07 60.1 133 28.6
vmacro17042 Vaccinium macrocarpon HOM05D000051 ORTHO05D000015 2.1e-07 60.1 129 32.6
FAN14G1913 Fragaria x ananassa HOM05D000051 ORTHO05D000015 2.8e-07 59.7 128 35.9
FAN11G0701 Fragaria x ananassa HOM05D000051 ORTHO05D000015 3.6e-07 59.3 130 30.0
RcHm_v2.0_Chr5g0028201 Rosa chinensis HOM05D000051 ORTHO05D000015 3.6e-07 59.3 130 31.5
Actinidia09921 Actinidia chinensis HOM05D000051 ORTHO05D000015 4.7e-07 58.9 128 28.1
Cc05_g13420 Coffea canephora HOM05D000051 ORTHO05D000015 6.1e-07 58.5 143 32.2
FAN02G0400 Fragaria x ananassa HOM05D000051 ORTHO05D000015 6.1e-07 58.5 137 34.3
MD11G1265300 Malus domestica HOM05D000051 ORTHO05D000015 8.0e-07 58.2 129 34.9
RcHm_v2.0_Chr2g0115721 Rosa chinensis HOM05D000051 ORTHO05D000015 8.0e-07 58.2 138 31.9
QL08p012292 Quercus lobata HOM05D000051 ORTHO05D000015 1.0e-06 57.8 138 32.6
AUR62015692 Chenopodium quinoa HOM05D000689 ORTHO05D000015 1.4e-06 57.4 126 31.7
RcHm_v2.0_Chr5g0028401 Rosa chinensis HOM05D000051 ORTHO05D000015 1.4e-06 57.4 127 31.5
RcHm_v2.0_Chr6g0304711 Rosa chinensis HOM05D000051 ORTHO05D000015 1.4e-06 57.4 135 31.1
Atru.chr12.2352 Acer truncatum HOM05D000051 ORTHO05D000015 1.8e-06 57.0 119 31.9
FvH4_3g17060 Fragaria vesca HOM05D000051 ORTHO05D000015 1.8e-06 57.0 130 29.2
MD11G1265000 Malus domestica HOM05D000051 ORTHO05D000015 1.8e-06 57.0 133 33.1
Ciclev10015203m.g Citrus clementina HOM05D000051 ORTHO05D000015 2.3e-06 56.6 147 28.6
FAN16G3673 Fragaria x ananassa HOM05D000051 ORTHO05D000015 2.3e-06 56.6 122 31.1
MD11G1265100 Malus domestica HOM05D000051 ORTHO05D000015 2.3e-06 56.6 131 34.4
Prupe.4G158900 Prunus persica HOM05D000051 ORTHO05D000015 2.3e-06 56.6 138 33.3
AUR62020685 Chenopodium quinoa HOM05D000051 ORTHO05D000015 3.0e-06 56.2 125 32.0
FAN10G1889 Fragaria x ananassa HOM05D000051 ORTHO05D000015 3.0e-06 56.2 155 27.1
QL05p062709 Quercus lobata HOM05D000051 ORTHO05D000015 3.0e-06 56.2 124 29.8
TPR.G24941 Trifolium pratense HOM05D000051 ORTHO05D000015 3.0e-06 56.2 98 31.6
AUR62028049 Chenopodium quinoa HOM05D000051 ORTHO05D000015 4.0e-06 55.8 91 35.2
DCAR_003632 Daucus carota HOM05D000051 ORTHO05D000015 4.0e-06 55.8 93 33.3
FAN03G3462 Fragaria x ananassa HOM05D000051 ORTHO05D000015 4.0e-06 55.8 193 29.0
QL08p012268 Quercus lobata HOM05D000051 ORTHO05D000015 4.0e-06 55.8 138 31.9
RcHm_v2.0_Chr5g0028391 Rosa chinensis HOM05D000051 ORTHO05D000015 4.0e-06 55.8 128 30.5
RcHm_v2.0_Chr7g0197921 Rosa chinensis HOM05D000051 ORTHO05D000015 4.0e-06 55.8 126 31.7
TPR.G27050 Trifolium pratense HOM05D000051 ORTHO05D000015 4.0e-06 55.8 94 35.1
Actinidia05113 Actinidia chinensis HOM05D000051 ORTHO05D000015 5.2e-06 55.5 120 35.0
AUR62020519 Chenopodium quinoa HOM05D006411 ORTHO05D007563 5.2e-06 55.5 122 32.8
AUR62020687 Chenopodium quinoa HOM05D000051 ORTHO05D000015 5.2e-06 55.5 127 30.7
AUR62028056 Chenopodium quinoa HOM05D000051 ORTHO05D000015 5.2e-06 55.5 92 39.1
Dinv26635 Davidia involucrata HOM05D000051 ORTHO05D000015 6.8e-06 55.1 189 27.5
FvH4_2g37070 Fragaria vesca HOM05D000051 ORTHO05D000015 6.8e-06 55.1 172 26.7
FvH4_2g40800 Fragaria vesca HOM05D000051 ORTHO05D000015 6.8e-06 55.1 135 28.9
FAN25G3081 Fragaria x ananassa HOM05D000051 ORTHO05D000015 6.8e-06 55.1 130 30.0
Sc13g0005560 Simmondsia chinensis HOM05D000051 ORTHO05D000015 6.8e-06 55.1 37 59.5
Medtr1377s0010 Medicago truncatula HOM05D000051 ORTHO05D000015 8.8e-06 54.7 117 33.3
Prupe.4G160800 Prunus persica HOM05D000051 ORTHO05D000015 8.8e-06 54.7 139 29.5
QL08p012322 Quercus lobata HOM05D000051 ORTHO05D000015 8.8e-06 54.7 116 32.8
RcHm_v2.0_Chr5g0029291 Rosa chinensis HOM05D000051 ORTHO05D000015 8.8e-06 54.7 129 30.2


User provided reference genes

Program Settings