Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc13g0004740 Simmondsia chinensis HOM05D004643 ORTHO05D005535 4.6e-132 474.6 239 100.0
Haze_11230 Corylus avellana HOM05D004643 ORTHO05D005535 6.0e-39 165.2 198 48.5
CiPaw.02G121300 Carya illinoinensis HOM05D004643 ORTHO05D005535 7.8e-39 164.9 194 49.0
AUR62034685 Chenopodium quinoa HOM05D004643 ORTHO05D005535 1.7e-38 163.7 196 49.5
AUR62024080 Chenopodium quinoa HOM05D004643 ORTHO05D005535 3.0e-38 162.9 201 48.3
Thecc.04G238200 Theobroma cacao HOM05D004643 ORTHO05D005535 1.4e-35 154.1 199 48.2
Cpa.g.sc44.119 Carica papaya HOM05D004643 ORTHO05D005535 2.4e-35 153.3 202 48.0
COL.COLO4_21561 Corchorus olitorius HOM05D004643 ORTHO05D005535 4.0e-35 152.5 199 48.7
QL06p001136 Quercus lobata HOM05D004643 ORTHO05D005535 4.0e-35 152.5 213 44.6
Glyma.20G150000 Glycine max HOM05D004643 ORTHO05D005535 5.3e-35 152.1 210 46.7
VMungo0720G0668 Vigna mungo HOM05D004643 ORTHO05D005535 2.6e-34 149.8 208 45.2
Glyma.10G244400 Glycine max HOM05D004643 ORTHO05D005535 3.4e-34 149.4 203 46.3
Manes.15G032500 Manihot esculenta HOM05D004643 ORTHO05D005535 2.4e-32 143.3 196 44.9
TAR362G0460 Trochodendron aralioides HOM05D004643 ORTHO05D005535 3.2e-32 142.9 208 44.7
Nn6g34159 Nelumbo nucifera HOM05D004643 ORTHO05D005535 9.3e-32 141.4 201 46.3
Phvul.007G061400 Phaseolus vulgaris HOM05D004643 ORTHO05D005535 1.2e-31 141.0 208 43.3
CiPaw.01G195600 Carya illinoinensis HOM05D004643 ORTHO05D005535 3.9e-30 136.0 212 40.6
TAR365G0093 Trochodendron aralioides HOM05D001497 ORTHO05D001707 1.1e-29 134.4 199 43.7
Lj5g0008364 Lotus japonicus HOM05D004643 ORTHO05D005535 2.5e-29 133.3 209 42.1
GSVIVG01018038001 Vitis vinifera HOM05D004643 ORTHO05D005535 3.3e-29 132.9 214 41.6
Ca_10855_v3 Cicer arietinum L. HOM05D004643 ORTHO05D005535 4.3e-29 132.5 191 46.6
Duzib151G1159 Durio zibethinus HOM05D004643 ORTHO05D005535 5.6e-29 132.1 193 44.6
Ciclev10005357m.g Citrus clementina HOM05D004643 ORTHO05D005535 7.4e-29 131.7 194 43.3
Medtr1g102900 Medicago truncatula HOM05D004643 ORTHO05D005535 1.3e-28 131.0 191 46.1
THA.LOC104808573 Tarenaya hassleriana HOM05D004643 ORTHO05D005535 4.8e-28 129.0 215 39.1
MBI11_g22675_MAGBIO Magnolia biondii HOM05D004643 ORTHO05D005535 8.1e-28 128.3 205 43.9
CsaV3_2G013410 Cucumis sativus L. HOM05D004643 ORTHO05D005535 1.1e-27 127.9 210 41.4
TWI53G0950 Tripterygium wilfordii HOM05D004643 ORTHO05D005535 4.0e-27 125.9 192 43.8
Prupe.1G020900 Prunus persica HOM05D004643 ORTHO05D005535 9.0e-27 124.8 194 42.3
Sed0027490 Sechium edule HOM05D004643 ORTHO05D005535 1.2e-26 124.4 187 41.2
Gohir.A10G113842 Gossypium hirsutum HOM05D004643 ORTHO05D005535 2.0e-26 123.6 202 43.1
PGR004G2239 Punica granatum HOM05D004643 ORTHO05D005535 4.5e-26 122.5 199 41.7
CANSAT78G2233 Cannabis sativa HOM05D004643 ORTHO05D005535 5.8e-26 122.1 199 40.7
MD16G1199200 Malus domestica HOM05D004643 ORTHO05D005535 7.6e-26 121.7 194 41.2
Gohir.D10G151600 Gossypium hirsutum HOM05D004643 ORTHO05D005535 9.9e-26 121.3 201 42.8
TPR.G26097 Trifolium pratense HOM05D004643 ORTHO05D005535 9.9e-26 121.3 190 43.7
TAR636G3033 Trochodendron aralioides HOM05D004643 ORTHO05D005535 1.3e-25 120.9 211 42.7
Gorai.011G168900 Gossypium raimondii HOM05D004643 ORTHO05D005535 2.9e-25 119.8 201 42.3
Aqoxy5G00405 Aquilegia oxysepala HOM05D004643 ORTHO05D005535 8.4e-25 118.2 218 39.9
THA.LOC104803050 Tarenaya hassleriana HOM05D004643 ORTHO05D005535 1.1e-24 117.9 205 38.0
Lalb_Chr21g0304771 Lupinus albus HOM05D004643 ORTHO05D005535 1.9e-24 117.1 189 43.4
Sp7g12820 Schrenkiella parvula HOM05D004643 ORTHO05D005535 1.9e-24 117.1 207 38.2
RcHm_v2.0_Chr4g0387691 Rosa chinensis HOM05D004643 ORTHO05D005535 3.2e-24 116.3 186 40.3
AT4G14720 Arabidopsis thaliana HOM05D004643 ORTHO05D005535 4.2e-24 115.9 194 40.2
ClCG06G006490 Citrullus lanatus HOM05D004643 ORTHO05D005535 7.1e-24 115.2 195 40.0
Thhalv10025735m.g Eutrema salsugineum HOM05D004643 ORTHO05D005535 7.1e-24 115.2 199 39.7
MD13G1199500 Malus domestica HOM05D004643 ORTHO05D005535 7.9e-23 111.7 204 37.3
AL7G41240 Arabidopsis lyrata HOM05D004643 ORTHO05D005535 1.3e-22 110.9 194 39.7
AL7G41265 Arabidopsis lyrata HOM05D004643 ORTHO05D005535 3.9e-22 109.4 206 38.8
Atru.chr4.2372 Acer truncatum HOM05D004643 ORTHO05D005535 1.1e-21 107.8 190 39.5
Carub.0007s2745 Capsella rubella HOM05D004643 ORTHO05D005535 1.9e-21 107.1 194 37.1
DCAR_002706 Daucus carota HOM05D004643 ORTHO05D005535 1.9e-21 107.1 210 37.1
CSS0031620 Camellia sinensis var. sinensis HOM05D004643 ORTHO05D005535 2.5e-21 106.7 203 39.9
Migut.O00727 Erythranthe guttata HOM05D004643 ORTHO05D005535 3.3e-21 106.3 216 39.4
Hma1.2p1_0172F.1_g075970 Hydrangea macrophylla HOM05D004643 ORTHO05D005535 4.3e-21 105.9 204 40.2
Cc01_g19060 Coffea canephora HOM05D004643 ORTHO05D005535 5.6e-21 105.5 202 38.6
Atru.chr4.2396 Acer truncatum HOM05D004643 ORTHO05D005535 7.4e-21 105.1 190 38.9
C01p28440 Brassica napus HOM05D004643 ORTHO05D005535 1.3e-20 104.4 215 35.3
GSVIVG01003113001 Vitis vinifera HOM05D004643 ORTHO05D005535 1.3e-20 104.4 204 39.7
Carub.0007s2747 Capsella rubella HOM05D004643 ORTHO05D005535 2.1e-20 103.6 205 39.5
CARHR221190 Cardamine hirsuta HOM05D004643 ORTHO05D005535 2.1e-20 103.6 198 36.4
Dinv22507 Davidia involucrata HOM05D004643 ORTHO05D005535 2.1e-20 103.6 203 38.4
FAN12G4007 Fragaria x ananassa HOM05D004643 ORTHO05D005535 2.1e-20 103.6 162 40.1
PSO170G0554 Papaver somniferum HOM05D004643 ORTHO05D005535 2.1e-20 103.6 180 41.1
PSO210G1486 Papaver somniferum HOM05D004643 ORTHO05D005535 2.8e-20 103.2 181 40.9
Potri.002G048500 Populus trichocarpa HOM05D004643 ORTHO05D005535 2.8e-20 103.2 202 37.6
FvH4_4g01120 Fragaria vesca HOM05D004643 ORTHO05D005535 3.7e-20 102.8 162 40.1
Migut.N02031 Erythranthe guttata HOM05D004643 ORTHO05D005535 4.8e-20 102.4 216 39.4
BcaNung00344 Brassica carinata HOM05D004643 ORTHO05D005535 6.2e-20 102.1 215 34.9
A01p22960 Brassica napus HOM05D004643 ORTHO05D005535 6.2e-20 102.1 215 34.9
Eucgr.H03414 Eucalyptus grandis HOM05D004643 ORTHO05D005535 6.2e-20 102.1 173 35.3
BcaB04g18255 Brassica carinata HOM05D004643 ORTHO05D005535 1.1e-19 101.3 207 36.7
BcaC09g50142 Brassica carinata HOM05D004643 ORTHO05D005535 1.8e-19 100.5 215 35.3
BraA01t02209Z Brassica rapa HOM05D004643 ORTHO05D005535 2.4e-19 100.1 216 35.2
Ciclev10021137m.g Citrus clementina HOM05D004643 ORTHO05D005535 2.4e-19 100.1 200 39.0
BolC1t02783H Brassica oleracea HOM05D004643 ORTHO05D005535 4.0e-19 99.4 216 35.2
A08p11380 Brassica napus HOM05D004643 ORTHO05D005535 5.3e-19 99.0 208 37.0
ECA248G3352 Erigeron canadensis HOM05D004643 ORTHO05D005535 5.3e-19 99.0 168 35.7
Psat6g204360 Pisum sativum HOM05D004643 ORTHO05D005535 9.0e-19 98.2 120 47.5
BolC8t48230H Brassica oleracea HOM05D004643 ORTHO05D005535 1.5e-18 97.4 208 37.0
Manes.03G173500 Manihot esculenta HOM05D004643 ORTHO05D005535 1.5e-18 97.4 127 44.1
BraA08t33131Z Brassica rapa HOM05D004643 ORTHO05D005535 2.6e-18 96.7 208 36.5
Potri.005G214300 Populus trichocarpa HOM05D004643 ORTHO05D005535 2.6e-18 96.7 200 36.5
MSTRG.21530 Avicennia marina HOM05D004643 ORTHO05D005535 3.4e-18 96.3 205 35.6
Oeu047218.1 Olea europaea HOM05D004643 ORTHO05D005535 4.5e-18 95.9 174 37.9
Actinidia19959 Actinidia chinensis HOM05D004643 ORTHO05D005535 5.8e-18 95.5 204 38.2
Lj2C1166G12 Lonicera japonica HOM05D004643 ORTHO05D005535 5.8e-18 95.5 240 36.2
SGA_v2.0_scaffold138G35301 Striga asiatica HOM05D004643 ORTHO05D005535 7.6e-18 95.1 192 35.9
CAN.G380.10 Capsicum annuum HOM05D004643 ORTHO05D005535 2.9e-17 93.2 166 37.3
Aa31LG9G2640 Aethionema arabicum HOM05D004643 ORTHO05D005535 3.8e-17 92.8 217 32.7
Lsat_1_v5_gn_5_185821 Lactuca sativa HOM05D004643 ORTHO05D005535 3.8e-17 92.8 158 38.0
Sabra05G0163800 Salix brachista HOM05D004643 ORTHO05D005535 3.8e-17 92.8 194 35.6
Actinidia09108 Actinidia chinensis HOM05D004643 ORTHO05D005535 8.4e-17 91.7 195 39.0
HanXRQChr01g0005571 Helianthus annuus HOM05D004643 ORTHO05D005535 8.4e-17 91.7 163 41.1
Lsat_1_v5_gn_8_94021 Lactuca sativa HOM05D004643 ORTHO05D005535 8.4e-17 91.7 170 40.0
Gohir.A12G002900 Gossypium hirsutum HOM05D004643 ORTHO05D005535 1.4e-16 90.9 194 38.7
Sopen09g027380 Solanum pennellii HOM05D004643 ORTHO05D005535 1.4e-16 90.9 211 36.5
Gorai.008G002400 Gossypium raimondii HOM05D004643 ORTHO05D005535 2.5e-16 90.1 192 39.6
Sed0024780 Sechium edule HOM05D004643 ORTHO05D005535 2.5e-16 90.1 122 45.9
Solyc09g065630.3 Solanum lycopersicum HOM05D004643 ORTHO05D005535 2.5e-16 90.1 207 37.7
EL10Ac3g06512 Beta vulgaris HOM05D004643 ORTHO05D005535 4.2e-16 89.4 98 45.9
Nn1g02445 Nelumbo nucifera HOM05D004643 ORTHO05D005535 4.2e-16 89.4 152 42.8
Duzib138G1309 Durio zibethinus HOM05D004643 ORTHO05D005535 7.1e-16 88.6 214 36.0
Gorai.004G077100 Gossypium raimondii HOM05D004643 ORTHO05D005535 7.1e-16 88.6 186 38.2
PGSC0003DMG400019346 Solanum tuberosum HOM05D004643 ORTHO05D005535 1.6e-15 87.4 204 36.3
BcaC07g37843 Brassica carinata HOM05D004643 ORTHO05D005535 2.1e-15 87.0 218 35.3
Nitab4.5_0000871g0020 Nicotiana tabacum HOM05D004643 ORTHO05D005535 2.7e-15 86.7 232 31.9
Nitab4.5_0000252g0230 Nicotiana tabacum HOM05D004643 ORTHO05D005535 3.5e-15 86.3 230 31.7
HanXRQChr11g0338851 Helianthus annuus HOM05D004643 ORTHO05D005535 4.6e-15 85.9 150 39.3
Gohir.D12G002600 Gossypium hirsutum HOM05D004643 ORTHO05D005535 6.0e-15 85.5 191 38.2
Rhsim13G0028400 Rhododendron simsii HOM05D004643 ORTHO05D005535 6.0e-15 85.5 226 34.1
CAN.G771.7 Capsicum annuum HOM05D004643 ORTHO05D005535 7.9e-15 85.1 216 31.5
Duzib211G0433 Durio zibethinus HOM05D004643 ORTHO05D005535 1.0e-14 84.7 164 37.8
Peaxi162Scf00230g00029 Petunia axillaris HOM05D004643 ORTHO05D005535 1.0e-14 84.7 216 34.7
SalBow4G2540 Salvia bowleyana HOM05D004643 ORTHO05D005535 1.3e-14 84.3 127 39.4
Atru.chr5.1514 Acer truncatum HOM05D004643 ORTHO05D005535 1.8e-14 84.0 207 36.7
FAN22G0811 Fragaria x ananassa HOM05D002305 ORTHO05D002528 2.3e-14 83.6 136 39.0
Duzib133G1145 Durio zibethinus HOM05D004643 ORTHO05D005535 8.7e-14 81.6 128 39.8
Ah.00g000940 Amaranthus hybridus HOM05D004643 ORTHO05D005535 2.5e-13 80.1 138 38.4
FAN17G1992 Fragaria x ananassa HOM05D002305 ORTHO05D002528 2.5e-13 80.1 136 38.2
PGSC0003DMG401020059 Solanum tuberosum HOM05D004643 ORTHO05D005535 4.3e-13 79.3 218 32.1
vmacro02609 Vaccinium macrocarpon HOM05D004643 ORTHO05D005535 5.7e-13 79.0 219 35.2
SGA_v2.0_scaffold1G00527 Striga asiatica HOM05D004643 ORTHO05D005535 9.7e-13 78.2 131 38.2
Gohir.A08G064300 Gossypium hirsutum HOM05D004643 ORTHO05D005535 1.6e-12 77.4 131 38.2
Nitab4.5_0001044g0010 Nicotiana tabacum HOM05D004643 ORTHO05D005535 2.8e-12 76.6 166 35.5
Thecc.01G272300 Theobroma cacao HOM05D004643 ORTHO05D005535 4.8e-12 75.9 159 35.2
HPP92_023542 Vanilla planifolia HOM05D004643 ORTHO05D005535 6.3e-12 75.5 208 33.2
MELO3C014283.2 Cucumis melo HOM05D004643 ORTHO05D005535 8.2e-12 75.1 210 31.4
unitig_0.g136 Utricularia gibba HOM05D004643 ORTHO05D005535 3.1e-11 73.2 159 35.2
Solyc06g084120.4 Solanum lycopersicum HOM05D004643 ORTHO05D005535 6.9e-11 72.0 185 31.9
unitig_60.g25785 Utricularia gibba HOM05D004643 ORTHO05D005535 1.5e-10 70.9 164 34.1
CARHR221170 Cardamine hirsuta HOM05D004643 ORTHO05D005535 3.4e-10 69.7 181 34.8
Sopen06g035500 Solanum pennellii HOM05D004643 ORTHO05D005535 7.7e-10 68.6 148 33.8
Sabra02G0039600 Salix brachista HOM05D004643 ORTHO05D005535 1.3e-09 67.8 176 33.5
CDE10G0665 Ceratophyllum demersum HOM05D004643 ORTHO05D005535 1.4e-08 64.3 136 34.6
CDE10G0709 Ceratophyllum demersum HOM05D004643 ORTHO05D005535 1.4e-08 64.3 136 34.6
TWI73G0832 Tripterygium wilfordii HOM05D004643 ORTHO05D005535 1.9e-08 63.9 80 42.5
A10p19160 Brassica napus HOM05D001047 ORTHO05D000768 3.2e-08 63.2 124 33.1
BraA10t43991Z Brassica rapa HOM05D001047 ORTHO05D000768 5.5e-08 62.4 124 32.3
ATR0665G494 Amborella trichopoda HOM05D004643 ORTHO05D005535 7.2e-08 62.0 158 36.1
Manes.05G081400 Manihot esculenta HOM05D004643 ORTHO05D005535 7.2e-08 62.0 106 38.7
BcaC04g19482 Brassica carinata HOM05D001047 ORTHO05D000768 1.2e-07 61.2 124 31.5
C09p55290 Brassica napus HOM05D001047 ORTHO05D000768 1.2e-07 61.2 124 31.5
BolC9t58389H Brassica oleracea HOM05D001047 ORTHO05D000768 1.2e-07 61.2 124 31.5
Nitab4.5_0015056g0010 Nicotiana tabacum HOM05D004643 ORTHO05D005535 1.2e-07 61.2 207 29.5
SHI00517 Sapria himalayana HOM05D004643 ORTHO05D005535 1.2e-07 61.2 107 32.7
MSTRG.18264 Avicennia marina HOM05D004643 ORTHO05D005535 1.6e-07 60.8 82 40.2
SEGI_27968 Sequoiadendron giganteum HOM05D004643 ORTHO05D005535 3.6e-07 59.7 151 31.8
AT4G14713 Arabidopsis thaliana HOM05D004643 ORTHO05D005535 6.1e-07 58.9 105 35.2
Potri.006G139400 Populus trichocarpa HOM05D001047 ORTHO05D000768 2.3e-06 57.0 118 33.1
COL.COLO4_09196 Corchorus olitorius HOM05D004643 ORTHO05D005535 3.0e-06 56.6 161 30.4
Pp3c25_6300 Physcomitrium patens HOM05D002346 ORTHO05D002452 3.9e-06 56.2 134 33.6


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