Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc13g0002920 Simmondsia chinensis HOM05D006670 ORTHO05D008715 1.2e-147 526.6 274 100.0
Haze_11539 Corylus avellana HOM05D006670 ORTHO05D008715 3.5e-107 392.1 269 75.5
HanXRQChr01g0022661 Helianthus annuus HOM05D006670 ORTHO05D008715 4.5e-107 391.7 275 72.0
Hund24851 Selenicereus undatus HOM05D006670 ORTHO05D008715 5.0e-106 388.3 257 76.7
Cfa014868 Carpinus fangiana HOM05D006670 ORTHO05D008715 6.5e-106 387.9 269 74.7
Lsat_1_v5_gn_0_4721 Lactuca sativa HOM05D006670 ORTHO05D008715 6.5e-106 387.9 278 70.9
Manes.15G049800 Manihot esculenta HOM05D006670 ORTHO05D008715 8.5e-106 387.5 259 76.1
QL06p022765 Quercus lobata HOM05D006670 ORTHO05D008715 8.5e-106 387.5 271 72.7
Potri.003G174400 Populus trichocarpa HOM05D006670 ORTHO05D008715 1.2e-104 383.6 269 73.2
CSS0047689 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 1.6e-104 383.3 268 73.5
CiPaw.01G205600 Carya illinoinensis HOM05D006670 ORTHO05D008715 1.6e-104 383.3 266 74.4
Manes.03G154700 Manihot esculenta HOM05D006670 ORTHO05D008715 3.6e-104 382.1 268 73.9
Dinv27152 Davidia involucrata HOM05D006670 ORTHO05D008715 8.0e-104 380.9 265 74.3
RcHm_v2.0_Chr4g0396631 Rosa chinensis HOM05D006670 ORTHO05D008715 8.0e-104 380.9 270 73.0
CSS0048127 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 1.8e-103 379.8 268 73.1
Sabra03G0127900 Salix brachista HOM05D006670 ORTHO05D008715 5.2e-103 378.3 269 72.9
FvH4_4g05510 Fragaria vesca HOM05D006670 ORTHO05D008715 1.2e-102 377.1 265 72.8
Rhsim09G0046600 Rhododendron simsii HOM05D006670 ORTHO05D008715 1.2e-102 377.1 269 71.7
Thecc.04G214700 Theobroma cacao HOM05D006670 ORTHO05D008715 1.2e-102 377.1 267 71.2
TAR636G1307 Trochodendron aralioides HOM05D006670 ORTHO05D008715 1.5e-102 376.7 269 70.6
CANSAT78G1187 Cannabis sativa HOM05D006670 ORTHO05D008715 2.0e-102 376.3 269 70.6
ECA248G0542 Erigeron canadensis HOM05D006670 ORTHO05D008715 2.0e-102 376.3 266 70.3
Ciclev10005609m.g Citrus clementina HOM05D006670 ORTHO05D008715 2.6e-102 375.9 261 72.0
FAN12G2738 Fragaria x ananassa HOM05D006670 ORTHO05D008715 4.4e-102 375.2 265 72.5
FAN22G1637 Fragaria x ananassa HOM05D006670 ORTHO05D008715 9.8e-102 374.0 265 72.5
Rhsim09G0047600 Rhododendron simsii HOM05D006670 ORTHO05D008715 3.7e-101 372.1 269 69.9
BcaB06g26594 Brassica carinata HOM05D006670 ORTHO05D008715 1.1e-100 370.5 267 70.0
COL.COLO4_05724 Corchorus olitorius HOM05D006670 ORTHO05D008715 1.1e-100 370.5 269 70.3
Duzib212G0230 Durio zibethinus HOM05D006670 ORTHO05D008715 1.1e-100 370.5 271 69.0
MD13G1229700 Malus domestica HOM05D006670 ORTHO05D008715 1.4e-100 370.2 265 72.5
Prupe.1G056900 Prunus persica HOM05D006670 ORTHO05D008715 1.8e-100 369.8 265 71.3
PGR083G1840 Punica granatum HOM05D006670 ORTHO05D008715 2.4e-100 369.4 268 70.1
Ah.04g153360 Amaranthus hybridus HOM05D006670 ORTHO05D008715 3.1e-100 369.0 263 70.7
FAN07G0632 Fragaria x ananassa HOM05D006670 ORTHO05D008715 3.1e-100 369.0 265 71.7
Aqoxy2G03824 Aquilegia oxysepala HOM05D006670 ORTHO05D008715 5.4e-100 368.2 268 70.1
CsaV3_3G011380 Cucumis sativus L. HOM05D006670 ORTHO05D008715 7.0e-100 367.9 267 71.2
ClCG05G003670 Citrullus lanatus HOM05D006670 ORTHO05D008715 1.6e-99 366.7 267 70.8
Gohir.D10G145900 Gossypium hirsutum HOM05D006670 ORTHO05D008715 2.7e-99 365.9 269 68.8
Gorai.011G163000 Gossypium raimondii HOM05D006670 ORTHO05D008715 2.7e-99 365.9 269 68.8
MELO3C006346.2 Cucumis melo HOM05D006670 ORTHO05D008715 3.5e-99 365.5 267 70.8
BolC7t41764H Brassica oleracea HOM05D006670 ORTHO05D008715 7.7e-99 364.4 268 68.7
DCAR_024309 Daucus carota HOM05D006670 ORTHO05D008715 7.7e-99 364.4 269 70.3
Sed0004390 Sechium edule HOM05D006670 ORTHO05D008715 7.7e-99 364.4 269 68.8
AUR62035928 Chenopodium quinoa HOM05D006670 ORTHO05D008715 1.7e-98 363.2 267 69.7
A07p08240 Brassica napus HOM05D006670 ORTHO05D008715 3.8e-98 362.1 268 69.4
BcaC06g35628 Brassica carinata HOM05D006670 ORTHO05D008715 5.0e-98 361.7 268 68.3
C07p12780 Brassica napus HOM05D006670 ORTHO05D008715 5.0e-98 361.7 268 68.3
MBI10_g16834_MAGBIO Magnolia biondii HOM05D006670 ORTHO05D008715 5.0e-98 361.7 257 72.0
CARHR100200 Cardamine hirsuta HOM05D006670 ORTHO05D008715 8.6e-98 360.9 268 66.8
AUR62035321 Chenopodium quinoa HOM05D006670 ORTHO05D008715 1.5e-97 360.1 267 68.2
Gohir.A10G120500 Gossypium hirsutum HOM05D006670 ORTHO05D008715 1.9e-97 359.8 269 67.3
vmacro00519 Vaccinium macrocarpon HOM05D006670 ORTHO05D008715 1.9e-97 359.8 324 60.2
PSO063G6527 Papaver somniferum HOM05D006670 ORTHO05D008715 7.2e-97 357.8 272 67.3
BraA07t28607Z Brassica rapa HOM05D006670 ORTHO05D008715 1.6e-96 356.7 268 67.5
Thhalv10002635m.g Eutrema salsugineum HOM05D006670 ORTHO05D008715 2.8e-96 355.9 271 66.4
Carub.0003s2449 Capsella rubella HOM05D006670 ORTHO05D008715 8.0e-96 354.4 268 67.2
AL3G39350 Arabidopsis lyrata HOM05D006670 ORTHO05D008715 2.3e-95 352.8 268 66.4
Eucgr.H02870 Eucalyptus grandis HOM05D006670 ORTHO05D008715 3.0e-95 352.4 267 69.3
arahy.Tifrunner.gnm1.ann1.CI907D Arachis hypogaea HOM05D006670 ORTHO05D008715 4.0e-95 352.1 270 67.8
Lju414A3G25 Lonicera japonica HOM05D006670 ORTHO05D008715 8.8e-95 350.9 236 75.8
PSO017G1158 Papaver somniferum HOM05D006670 ORTHO05D008715 1.5e-94 350.1 272 66.2
THA.LOC104808732 Tarenaya hassleriana HOM05D006670 ORTHO05D008715 2.0e-94 349.7 253 70.8
Sp3g21930 Schrenkiella parvula HOM05D006670 ORTHO05D008715 2.6e-94 349.4 267 66.3
ATR0787G198 Amborella trichopoda HOM05D006670 ORTHO05D008715 3.4e-94 349.0 268 67.2
Cpa.g.sc59.72 Carica papaya HOM05D006670 ORTHO05D008715 3.4e-94 349.0 265 68.3
arahy.Tifrunner.gnm1.ann1.M1QCRY Arachis hypogaea HOM05D006670 ORTHO05D008715 4.4e-94 348.6 270 67.0
Migut.G00614 Erythranthe guttata HOM05D006670 ORTHO05D008715 4.4e-94 348.6 271 66.4
Lalb_Chr01g0011161 Lupinus albus HOM05D006670 ORTHO05D008715 4.4e-94 348.6 266 69.5
AT3G24030 Arabidopsis thaliana HOM05D006670 ORTHO05D008715 9.8e-94 347.4 268 65.3
Glyma.10G127400 Glycine max HOM05D006670 ORTHO05D008715 9.8e-94 347.4 273 65.9
Actinidia25088 Actinidia chinensis HOM05D006670 ORTHO05D008715 1.3e-93 347.1 241 75.5
VMungo0720G2028 Vigna mungo HOM05D006670 ORTHO05D008715 3.7e-93 345.5 274 65.7
MSTRG.4202 Avicennia marina HOM05D006670 ORTHO05D008715 4.9e-93 345.1 272 64.3
Phvul.007G238000 Phaseolus vulgaris HOM05D006670 ORTHO05D008715 8.3e-93 344.4 272 65.8
Sopen05g031980 Solanum pennellii HOM05D006670 ORTHO05D008715 1.2e-91 340.5 266 68.0
SGA_v2.0_scaffold57G20164 Striga asiatica HOM05D006670 ORTHO05D008715 1.0e-90 337.4 268 63.1
Ca_11808_v3 Cicer arietinum L. HOM05D006670 ORTHO05D008715 1.3e-90 337.0 269 66.9
Atru.chr4.1814 Acer truncatum HOM05D006670 ORTHO05D008715 1.1e-89 334.0 274 65.0
Lj6g0025132 Lotus japonicus HOM05D006670 ORTHO05D008715 1.9e-89 333.2 272 64.3
Psat6g047400 Pisum sativum HOM05D006670 ORTHO05D008715 1.9e-89 333.2 267 66.7
Peaxi162Scf00536g00711 Petunia axillaris HOM05D006670 ORTHO05D008715 2.5e-89 332.8 267 65.5
TPR.G11296 Trifolium pratense HOM05D006670 ORTHO05D008715 3.3e-89 332.4 267 65.9
Medtr1g046510 Medicago truncatula HOM05D006670 ORTHO05D008715 1.4e-87 327.0 269 64.3
SHI00002 Sapria himalayana HOM05D006670 ORTHO05D008715 2.3e-87 326.2 281 64.1
Medtr1g046790 Medicago truncatula HOM05D006670 ORTHO05D008715 6.8e-87 324.7 269 63.9
SEGI_39672 Sequoiadendron giganteum HOM05D006670 ORTHO05D008715 1.8e-84 316.6 270 60.7
Zm00001eb341310 Zea mays HOM05D006670 ORTHO05D008715 4.1e-84 315.5 267 62.2
Mapoly0087s0052 Marchantia polymorpha HOM05D006670 ORTHO05D008715 1.2e-83 313.9 266 61.7
Nn3g19866 Nelumbo nucifera HOM05D006670 ORTHO05D008715 3.5e-83 312.4 231 69.3
GSVIVG01029032001 Vitis vinifera HOM05D006670 ORTHO05D008715 7.8e-83 311.2 222 70.7
Pp3c9_10780 Physcomitrium patens HOM05D006670 ORTHO05D008715 2.5e-81 306.2 265 58.9
PGSC0003DMG400027217 Solanum tuberosum HOM05D006670 ORTHO05D008715 3.6e-80 302.4 238 68.1
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 4.7e-80 302.0 258 60.1
Nitab4.5_0001769g0060 Nicotiana tabacum HOM05D006670 ORTHO05D008715 3.1e-79 299.3 264 61.4
CDE01G0405 Ceratophyllum demersum HOM05D007853 ORTHO05D009873 8.9e-79 297.7 236 65.7
Nitab4.5_0012036g0010 Nicotiana tabacum HOM05D006670 ORTHO05D008715 8.9e-79 297.7 264 60.6
Oeu022324.1 Olea europaea HOM05D006670 ORTHO05D008715 1.2e-78 297.4 239 64.0
SMO137G0262 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 5.4e-76 288.5 262 59.9
Cc03_g07080 Coffea canephora HOM05D006670 ORTHO05D008715 3.5e-75 285.8 221 67.0
unitig_747.g21700 Utricularia gibba HOM05D006670 ORTHO05D008715 4.6e-75 285.4 389 43.4
RhsimUnG0181700 Rhododendron simsii HOM05D006670 ORTHO05D008715 2.5e-73 279.6 269 57.2
EL10Ac3g06772 Beta vulgaris HOM05D006670 ORTHO05D008715 2.1e-67 260.0 230 59.6
SMO134G0250 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 3.3e-65 252.7 268 53.7
Cre06.g255350 Chlamydomonas reinhardtii HOM05D006670 ORTHO05D008715 1.2e-64 250.8 269 50.9
Dinv44414 Davidia involucrata HOM05D006670 ORTHO05D008715 2.4e-52 209.9 149 72.5
Psat7g020640 Pisum sativum HOM05D006670 ORTHO05D008715 3.0e-50 203.0 196 60.2
Psat4g139560 Pisum sativum HOM05D006670 ORTHO05D000720 1.1e-47 194.5 220 52.3
Lju414A3G24 Lonicera japonica HOM05D006670 ORTHO05D008715 9.0e-47 191.4 178 60.7
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 2.2e-45 186.8 140 65.7
Potri.001G053900 Populus trichocarpa HOM05D006670 ORTHO05D008715 2.5e-41 173.3 119 73.9
CAN.G305.16 Capsicum annuum HOM05D006670 ORTHO05D008715 5.6e-41 172.2 131 71.0
Psat0s5229g0080 Pisum sativum HOM05D006670 ORTHO05D006513 9.6e-41 171.4 215 48.4
CAN.G305.17 Capsicum annuum HOM05D006670 ORTHO05D008715 4.0e-39 166.0 153 56.2
Lsat_1_v5_gn_5_180420 Lactuca sativa HOM05D006670 ORTHO05D008715 3.5e-35 152.9 116 67.2
Os01g0363600 Oryza sativa ssp. japonica HOM05D006670 ORTHO05D008715 3.5e-35 152.9 139 51.8
Migut.G00612 Erythranthe guttata HOM05D006670 ORTHO05D008715 8.2e-32 141.7 130 63.8
Psat4g139640 Pisum sativum HOM05D006670 ORTHO05D002176 2.6e-30 136.7 136 58.1
Sabra01G0038200 Salix brachista HOM05D006670 ORTHO05D349611 7.1e-28 128.6 207 43.5
PGSC0003DMG402027165 Solanum tuberosum HOM05D006670 ORTHO05D008715 2.6e-22 110.2 78 74.4
FAN17G2931 Fragaria x ananassa HOM05D006670 ORTHO05D008715 4.2e-20 102.8 82 68.3
Cfa024720 Carpinus fangiana HOM05D005536 ORTHO05D006999 1.7e-16 90.9 243 30.9
Cpa.g.sc59.70 Carica papaya HOM05D006670 ORTHO05D119377 9.4e-12 75.1 108 43.5
Psat5g196680 Pisum sativum HOM05D006670 ORTHO05D008715 1.5e-09 67.8 46 65.2


User provided reference genes

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