Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc13g0002360 Simmondsia chinensis HOM05D003641 ORTHO05D004915 7.6e-200 700.3 349 100.0
Hund24813 Selenicereus undatus HOM05D003641 ORTHO05D004915 8.5e-159 563.9 351 79.2
Manes.09G037400 Manihot esculenta HOM05D003641 ORTHO05D004915 6.1e-157 557.8 349 75.9
TWI74G1529 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 2.3e-156 555.8 349 76.5
TWI53G2154 Tripterygium wilfordii HOM05D003641 ORTHO05D004915 1.5e-155 553.1 349 76.5
TAR636G0728 Trochodendron aralioides HOM05D003641 ORTHO05D004915 2.0e-155 552.7 349 75.6
DCAR_017036 Daucus carota HOM05D003641 ORTHO05D004915 1.7e-154 549.7 351 74.9
MD14G1054700 Malus domestica HOM05D003641 ORTHO05D004915 1.8e-153 546.2 352 74.4
Cfa020150 Carpinus fangiana HOM05D003641 ORTHO05D004915 2.4e-153 545.8 351 75.2
Haze_20012 Corylus avellana HOM05D003641 ORTHO05D004915 1.2e-152 543.5 352 75.0
CsaV3_3G038670 Cucumis sativus L. HOM05D003641 ORTHO05D004915 1.5e-152 543.1 353 73.9
HanXRQChr01g0010591 Helianthus annuus HOM05D003641 ORTHO05D004915 1.5e-152 543.1 356 74.4
TAR633G0428 Trochodendron aralioides HOM05D003641 ORTHO05D004915 2.0e-152 542.7 349 75.4
EL10Ac3g06892 Beta vulgaris HOM05D003641 ORTHO05D004915 5.9e-152 541.2 349 76.2
Manes.08G042800 Manihot esculenta HOM05D003641 ORTHO05D004915 5.9e-152 541.2 349 74.5
CDE05G2508 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 7.7e-152 540.8 349 73.6
CiPaw.09G029000 Carya illinoinensis HOM05D003641 ORTHO05D004915 1.7e-151 539.7 352 73.9
CANSAT64G0207 Cannabis sativa HOM05D003641 ORTHO05D004915 2.2e-151 539.3 359 72.4
ClCG10G017650 Citrullus lanatus HOM05D003641 ORTHO05D004915 3.8e-151 538.5 352 73.9
Sabra06G0149100 Salix brachista HOM05D003641 ORTHO05D004915 8.5e-151 537.3 350 74.3
CAN.G960.10 Capsicum annuum HOM05D003641 ORTHO05D004915 1.4e-150 536.6 355 73.2
MBI19_g17419_MAGBIO Magnolia biondii HOM05D003641 ORTHO05D004915 3.2e-150 535.4 349 72.8
FvH4_6g21990 Fragaria vesca HOM05D003641 ORTHO05D004915 5.5e-150 534.6 349 73.1
FAN14G0097 Fragaria x ananassa HOM05D003641 ORTHO05D004915 5.5e-150 534.6 349 73.1
Aqoxy1G00140 Aquilegia oxysepala HOM05D003641 ORTHO05D004915 7.2e-150 534.3 356 72.5
CiPaw.10G025600 Carya illinoinensis HOM05D003641 ORTHO05D004915 7.2e-150 534.3 351 72.1
MELO3C009611.2 Cucumis melo HOM05D003641 ORTHO05D004915 1.2e-149 533.5 353 72.8
Atru.chr8.1148 Acer truncatum HOM05D003641 ORTHO05D004915 2.1e-149 532.7 355 72.7
ECA248G0025 Erigeron canadensis HOM05D003641 ORTHO05D004915 2.7e-149 532.3 352 75.0
Potri.006G194400 Populus trichocarpa HOM05D003641 ORTHO05D004915 2.7e-149 532.3 349 72.5
BcaB06g25550 Brassica carinata HOM05D003641 ORTHO05D004915 3.6e-149 531.9 349 72.2
Lj2A365T90 Lonicera japonica HOM05D003641 ORTHO05D004915 4.7e-149 531.6 351 75.2
Ciclev10012043m.g Citrus clementina HOM05D003641 ORTHO05D004915 6.1e-149 531.2 361 71.7
Rhsim03G0004900 Rhododendron simsii HOM05D003641 ORTHO05D004915 1.0e-148 530.4 352 73.9
PGSC0003DMG400011447 Solanum tuberosum HOM05D003641 ORTHO05D004915 1.4e-148 530.0 354 72.9
CDE11G0833 Ceratophyllum demersum HOM05D003641 ORTHO05D004915 1.8e-148 529.6 349 72.2
Eucgr.A02465 Eucalyptus grandis HOM05D003641 ORTHO05D004915 1.8e-148 529.6 360 72.2
A05p37290 Brassica napus HOM05D003641 ORTHO05D004915 2.3e-148 529.3 354 72.3
vmacro07894 Vaccinium macrocarpon HOM05D003641 ORTHO05D004915 2.3e-148 529.3 349 74.2
AUR62011998 Chenopodium quinoa HOM05D003641 ORTHO05D004915 3.0e-148 528.9 355 71.5
PGR004G2452 Punica granatum HOM05D003641 ORTHO05D004915 3.0e-148 528.9 354 72.0
Sopen10g029550 Solanum pennellii HOM05D003641 ORTHO05D004915 3.0e-148 528.9 353 71.4
C05p55760 Brassica napus HOM05D003641 ORTHO05D004915 3.9e-148 528.5 351 72.1
BraA05t22525Z Brassica rapa HOM05D003641 ORTHO05D004915 8.8e-148 527.3 351 71.5
FAN02G1826 Fragaria x ananassa HOM05D003641 ORTHO05D004915 2.0e-147 526.2 349 71.9
Hma1.2p1_0676F.1_g201930 Hydrangea macrophylla HOM05D003641 ORTHO05D004915 3.3e-147 525.4 349 72.8
Nitab4.5_0007274g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 5.7e-147 524.6 350 72.3
Solyc10g078930.2 Solanum lycopersicum HOM05D003641 ORTHO05D004915 5.7e-147 524.6 353 70.5
Duzib093G1627 Durio zibethinus HOM05D003641 ORTHO05D004915 7.4e-147 524.2 353 70.5
Aa31sc80G90 Aethionema arabicum HOM05D003641 ORTHO05D004915 9.7e-147 523.9 361 70.1
FAN05G2657 Fragaria x ananassa HOM05D003641 ORTHO05D004915 1.3e-146 523.5 349 71.3
FAN09G3507 Fragaria x ananassa HOM05D003641 ORTHO05D004915 2.8e-146 522.3 349 71.1
Psat3g067000 Pisum sativum HOM05D003641 ORTHO05D004915 2.8e-146 522.3 355 71.3
Gohir.A04G051900 Gossypium hirsutum HOM05D003641 ORTHO05D004915 8.2e-146 520.8 355 69.6
Gorai.012G099600 Gossypium raimondii HOM05D003641 ORTHO05D004915 1.1e-145 520.4 355 70.1
Peaxi162Scf00258g00921 Petunia axillaris HOM05D003641 ORTHO05D004915 1.4e-145 520.0 353 70.8
RcHm_v2.0_Chr3g0479291 Rosa chinensis HOM05D003641 ORTHO05D004915 1.8e-145 519.6 351 71.8
Thecc.05G174300 Theobroma cacao HOM05D003641 ORTHO05D004915 1.8e-145 519.6 353 70.0
AT3G12050 Arabidopsis thaliana HOM05D003641 ORTHO05D004915 2.4e-145 519.2 361 69.0
CARHR086620 Cardamine hirsuta HOM05D003641 ORTHO05D004915 2.4e-145 519.2 360 68.3
Duzib128G0491 Durio zibethinus HOM05D003641 ORTHO05D004915 2.4e-145 519.2 353 70.5
Gohir.D04G089500 Gossypium hirsutum HOM05D003641 ORTHO05D004915 3.1e-145 518.8 355 69.9
AL3G23660 Arabidopsis lyrata HOM05D003641 ORTHO05D004915 4.1e-145 518.5 361 68.7
Lju124A24T32 Lonicera japonica HOM05D003641 ORTHO05D004915 4.1e-145 518.5 349 71.1
Sabra16G0062900 Salix brachista HOM05D003641 ORTHO05D004915 4.1e-145 518.5 350 70.9
Ca_08533_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 5.3e-145 518.1 359 70.2
SalBow6G5303 Salvia bowleyana HOM05D003641 ORTHO05D004915 5.3e-145 518.1 356 70.8
Lsat_1_v5_gn_5_164500 Lactuca sativa HOM05D003641 ORTHO05D004915 9.1e-145 517.3 343 72.6
Potri.016G060100 Populus trichocarpa HOM05D003641 ORTHO05D004915 9.1e-145 517.3 355 70.1
Prupe.7G080100 Prunus persica HOM05D003641 ORTHO05D004915 9.1e-145 517.3 354 70.3
Sp3g10280 Schrenkiella parvula HOM05D003641 ORTHO05D004915 1.6e-144 516.5 360 68.9
Sed0007356 Sechium edule HOM05D003641 ORTHO05D004915 2.0e-144 516.2 352 69.9
SGA_v2.0_scaffold105G30499 Striga asiatica HOM05D003641 ORTHO05D004915 2.0e-144 516.2 357 71.1
MD12G1055300 Malus domestica HOM05D003641 ORTHO05D004915 4.5e-144 515.0 351 70.1
CSS0018208 Camellia sinensis var. sinensis HOM05D003641 ORTHO05D004915 5.9e-144 514.6 349 71.6
ATR0598G178 Amborella trichopoda HOM05D003641 ORTHO05D004915 1.3e-143 513.5 349 71.1
Ah.04g152830 Amaranthus hybridus HOM05D003641 ORTHO05D004915 3.8e-143 511.9 332 74.4
Lj1g0002782 Lotus japonicus HOM05D003641 ORTHO05D004915 3.8e-143 511.9 349 69.6
COL.COLO4_29349 Corchorus olitorius HOM05D003641 ORTHO05D004915 5.0e-143 511.5 352 69.6
Cpa.g.sc85.60 Carica papaya HOM05D003641 ORTHO05D004915 6.5e-143 511.1 355 69.0
Medtr7g093500 Medicago truncatula HOM05D003641 ORTHO05D004915 8.5e-143 510.8 355 70.1
QL07p024293 Quercus lobata HOM05D003641 ORTHO05D004915 1.1e-142 510.4 365 68.8
AUR62015343 Chenopodium quinoa HOM05D003641 ORTHO05D004915 2.5e-142 509.2 349 70.5
Oeu006209.1 Olea europaea HOM05D003641 ORTHO05D004915 2.5e-142 509.2 365 68.8
Oeu063867.1 Olea europaea HOM05D003641 ORTHO05D004915 2.5e-142 509.2 355 69.0
Hund19209 Selenicereus undatus HOM05D003641 ORTHO05D004915 2.5e-142 509.2 351 70.1
Ca_12045_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 4.2e-142 508.4 350 69.1
BolC5t34243H Brassica oleracea HOM05D003641 ORTHO05D004915 7.2e-142 507.7 394 64.2
VMungo1383G0826 Vigna mungo HOM05D003641 ORTHO05D004915 7.2e-142 507.7 356 68.5
Glyma.03G146100 Glycine max HOM05D003641 ORTHO05D004915 9.4e-142 507.3 357 68.6
THA.LOC104826776 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 9.4e-142 507.3 355 68.7
Dinv24057 Davidia involucrata HOM05D003641 ORTHO05D004915 1.6e-141 506.5 353 68.3
Thhalv10021006m.g Eutrema salsugineum HOM05D003641 ORTHO05D004915 2.7e-141 505.8 363 67.2
Phvul.001G143800 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 4.7e-141 505.0 361 67.0
MSTRG.19915 Avicennia marina HOM05D003641 ORTHO05D004915 1.0e-140 503.8 356 68.8
Glyma.19G149300 Glycine max HOM05D003641 ORTHO05D004915 1.4e-140 503.4 355 68.7
Migut.J01850 Erythranthe guttata HOM05D003641 ORTHO05D004915 1.8e-140 503.1 358 69.3
SGA_v2.0_scaffold69G23056 Striga asiatica HOM05D003641 ORTHO05D004915 1.8e-140 503.1 356 69.9
arahy.Tifrunner.gnm1.ann1.G8NWJQ Arachis hypogaea HOM05D003641 ORTHO05D004915 3.0e-140 502.3 360 67.8
arahy.Tifrunner.gnm1.ann1.86C462 Arachis hypogaea HOM05D003641 ORTHO05D004915 6.7e-140 501.1 360 67.8
Carub.0003s1139 Capsella rubella HOM05D003641 ORTHO05D004915 6.7e-140 501.1 366 66.4
THA.LOC104809934 Tarenaya hassleriana HOM05D003641 ORTHO05D004915 6.7e-140 501.1 356 68.8
Cc06_g15710 Coffea canephora HOM05D003641 ORTHO05D004915 7.5e-139 497.7 353 68.0
Lalb_Chr18g0047991 Lupinus albus HOM05D003641 ORTHO05D004915 2.8e-138 495.7 358 67.9
TPR.G30301 Trifolium pratense HOM05D003641 ORTHO05D004915 1.8e-137 493.0 350 67.4
Lj5g0013930 Lotus japonicus HOM05D003641 ORTHO05D004915 4.1e-137 491.9 358 67.6
HPP92_005766 Vanilla planifolia HOM05D003641 ORTHO05D004915 4.1e-137 491.9 364 65.4
Medtr0136s0060 Medicago truncatula HOM05D003641 ORTHO05D004915 1.2e-136 490.3 350 67.4
PSO135G0566 Papaver somniferum HOM05D003641 ORTHO05D004915 1.6e-136 490.0 355 65.9
Nitab4.5_0001137g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 2.0e-136 489.6 351 68.1
PSO724G0609 Papaver somniferum HOM05D003641 ORTHO05D004915 4.5e-136 488.4 358 65.9
Zm00001eb037640 Zea mays HOM05D003641 ORTHO05D004915 7.7e-136 487.6 351 68.1
Glyma.09G109200 Glycine max HOM05D003641 ORTHO05D004915 1.1e-134 483.8 349 65.9
HPP92_009321 Vanilla planifolia HOM05D003641 ORTHO05D004915 1.9e-134 483.0 361 65.4
Phvul.007G261100 Phaseolus vulgaris HOM05D003641 ORTHO05D004915 3.2e-134 482.3 352 65.9
unitig_899.g15167 Utricularia gibba HOM05D003641 ORTHO05D004915 4.7e-133 478.4 350 66.9
Os08g0464000 Oryza sativa ssp. japonica HOM05D003641 ORTHO05D004915 3.0e-132 475.7 359 64.1
Nitab4.5_0000105g0210 Nicotiana tabacum HOM05D003641 ORTHO05D004915 1.5e-131 473.4 348 67.5
BcaC05g29294 Brassica carinata HOM05D003641 ORTHO05D004915 5.7e-131 471.5 351 66.4
Zm00001eb177410 Zea mays HOM05D003641 ORTHO05D004915 5.7e-131 471.5 356 65.7
VMungo0720G0815 Vigna mungo HOM05D003641 ORTHO05D004915 7.5e-131 471.1 353 65.7
Pp3c9_15400 Physcomitrium patens HOM05D003641 ORTHO05D004915 2.2e-130 469.5 355 63.1
Nitab4.5_0002343g0010 Nicotiana tabacum HOM05D003641 ORTHO05D004915 8.3e-130 467.6 355 66.2
Glyma.02G171100 Glycine max HOM05D003641 ORTHO05D004915 3.1e-129 465.7 351 64.1
Pp3c15_21400 Physcomitrium patens HOM05D003641 ORTHO05D004915 5.9e-128 461.5 353 60.6
Mapoly0109s0023 Marchantia polymorpha HOM05D003641 ORTHO05D004915 1.9e-126 456.4 351 62.1
AagrBONN_evm.TU.Sc2ySwM_344.3694 Anthoceros agrestis HOM05D003641 ORTHO05D004915 3.2e-126 455.7 350 62.6
unitig_746.g26803 Utricularia gibba HOM05D003641 ORTHO05D004915 7.2e-126 454.5 335 66.3
SMO203G0054 Selaginella moellendorffii HOM05D003641 ORTHO05D004915 2.3e-124 449.5 349 60.7
Nn7g35971 Nelumbo nucifera HOM05D003641 ORTHO05D004915 1.4e-121 440.3 286 75.5
Nn7g35972 Nelumbo nucifera HOM05D003641 ORTHO05D004915 2.4e-121 439.5 300 72.3
Actinidia22049 Actinidia chinensis HOM05D003641 ORTHO05D004915 1.2e-109 400.6 350 60.3
Psat6g123080 Pisum sativum HOM05D003641 ORTHO05D004915 1.4e-108 397.1 295 67.1
GSVIVG01033476001 Vitis vinifera HOM05D003641 ORTHO05D004915 2.7e-104 382.9 349 57.3
TPR.G35793 Trifolium pratense HOM05D003641 ORTHO05D004915 2.8e-101 372.9 292 63.0
Gorai.012G099500 Gossypium raimondii HOM05D003641 ORTHO05D004915 3.1e-100 369.4 329 57.4
Actinidia14376 Actinidia chinensis HOM05D003641 ORTHO05D004915 8.9e-100 367.9 272 68.4
PRCOL_00005901 Prasinoderma coloniale HOM05D003641 ORTHO05D004915 1.7e-74 283.9 349 42.4
Gohir.D04G089400 Gossypium hirsutum HOM05D003641 ORTHO05D004915 1.1e-73 281.2 213 66.7
SEGI_39925 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 2.3e-71 273.5 274 52.2
MCO07G236 Micromonas commoda HOM05D003641 ORTHO05D004915 1.3e-69 267.7 350 42.9
BcaC09g48210 Brassica carinata HOM05D003641 ORTHO05D004915 4.0e-68 262.7 242 59.1
Gohir.A04G052026 Gossypium hirsutum HOM05D003641 ORTHO05D004915 6.7e-63 245.4 156 70.5
Cre03.g199300 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D004915 8.4e-58 228.4 356 35.4
Gohir.A04G052000 Gossypium hirsutum HOM05D003641 ORTHO05D004915 1.1e-57 228.0 175 66.9
Actinidia32404 Actinidia chinensis HOM05D003641 ORTHO05D004915 5.1e-55 219.2 115 87.8
arahy.Tifrunner.gnm1.ann1.EPN7T6 Arachis hypogaea HOM05D003641 ORTHO05D004915 9.0e-52 208.4 148 68.9
arahy.Tifrunner.gnm1.ann1.VQQW03 Arachis hypogaea HOM05D003641 ORTHO05D004915 2.0e-51 207.2 126 77.0
Ca_31327_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 2.9e-34 150.2 85 76.5
SEGI_05882 Sequoiadendron giganteum HOM05D003641 ORTHO05D004915 2.9e-34 150.2 159 52.8
Ca_14569_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 6.5e-34 149.1 85 76.5
Ca_20435_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.4e-33 147.9 85 75.3
Ca_09720_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 8.0e-32 142.1 85 72.9
Hund07686 Selenicereus undatus HOM05D003641 ORTHO05D011049 1.0e-31 141.7 184 42.9
HanXRQChr03g0083061 Helianthus annuus HOM05D003641 ORTHO05D004915 3.9e-31 139.8 138 51.4
Glyma.09G095600 Glycine max HOM05D003641 ORTHO05D004915 3.3e-30 136.7 131 56.5
arahy.Tifrunner.gnm1.ann1.20Y790 Arachis hypogaea HOM05D003641 ORTHO05D004915 2.0e-27 127.5 106 62.3
Hund07687 Selenicereus undatus HOM05D003641 ORTHO05D021213 1.6e-24 117.9 185 41.6
Dinv18648 Davidia involucrata HOM05D003641 ORTHO05D004915 2.3e-23 114.0 59 89.8
Dinv26263 Davidia involucrata HOM05D003641 ORTHO05D004915 2.3e-23 114.0 59 89.8
Dinv18651 Davidia involucrata HOM05D003641 ORTHO05D004915 4.0e-23 113.2 63 85.7
EL10Ac8g19334 Beta vulgaris HOM05D003641 ORTHO05D027013 1.8e-20 104.4 75 66.7
MCO11G399 Micromonas commoda HOM05D003641 ORTHO05D044219 1.8e-20 104.4 167 35.3
Ca_12039_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 4.1e-20 103.2 58 81.0
Nn8g39306 Nelumbo nucifera HOM05D003641 ORTHO05D004915 5.3e-20 102.8 60 83.3
arahy.Tifrunner.gnm1.ann1.XYD4PT Arachis hypogaea HOM05D003641 ORTHO05D038899 2.2e-18 97.4 76 67.1
CBR_g18730 Chara braunii HOM05D003641 ORTHO05D004915 2.2e-18 97.4 55 80.0
Ca_03268_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 2.5e-17 94.0 59 72.9
Cre08.g358539 Chlamydomonas reinhardtii HOM05D003641 ORTHO05D044219 4.2e-17 93.2 149 35.6
TWI14G1341 Tripterygium wilfordii HOM05D000045 ORTHO05D000067 1.8e-15 87.8 80 53.8
SGA_v2.0_scaffold200G41266 Striga asiatica HOM05D037212 ORTHO05D027013 2.0e-14 84.3 75 54.7
Ca_20824_v3 Cicer arietinum L. HOM05D003641 ORTHO05D004915 1.3e-13 81.6 37 86.5
BolC1t05367H Brassica oleracea HOM05D003641 ORTHO05D038899 8.3e-13 79.0 49 73.5
PGSC0003DMG400035352 Solanum tuberosum HOM05D003641 ORTHO05D004915 1.0e-10 72.0 83 48.2
PRCOL_00004577 Prasinoderma coloniale HOM05D003641 ORTHO05D049026 1.7e-10 71.2 153 30.1
VMungo0464G0530 Vigna mungo HOM05D003641 ORTHO05D004915 1.7e-10 71.2 64 48.4
SGA_v2.0_scaffold196G40950 Striga asiatica HOM05D003641 ORTHO05D403144 2.3e-10 70.9 213 28.2
CsaV3_5G015400 Cucumis sativus L. HOM05D003641 ORTHO05D004915 1.9e-09 67.8 50 62.0
Peaxi162Scf00003g04539 Petunia axillaris HOM05D000312 ORTHO05D000221 4.7e-08 63.2 87 41.4
Sopen02g001110 Solanum pennellii HOM05D003641 ORTHO05D004915 7.5e-06 55.8 94 40.4


User provided reference genes

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