Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc13g0001370 Simmondsia chinensis HOM05D008152 ORTHO05D010231 5.3e-36 153.7 70 100.0
Hund19113 Selenicereus undatus HOM05D008152 ORTHO05D010231 2.0e-14 82.0 74 60.8
Glyma.03G128700 Glycine max HOM05D008152 ORTHO05D010231 8.2e-13 76.6 67 56.7
PGR031G3912 Punica granatum HOM05D008152 ORTHO05D010231 8.2e-13 76.6 67 58.2
Oeu013028.1 Olea europaea HOM05D008152 ORTHO05D010231 2.4e-12 75.1 57 54.4
Lalb_Chr14g0365951 Lupinus albus HOM05D008152 ORTHO05D010231 4.1e-12 74.3 67 53.7
Glyma.19G131100 Glycine max HOM05D008152 ORTHO05D010231 7.0e-12 73.6 67 56.7
Sc19g0008340 Simmondsia chinensis HOM05D030312 ORTHO05D027002 7.7e-11 70.1 54 70.4
Nitab4.5_0010323g0030 Nicotiana tabacum HOM05D008152 ORTHO05D010231 1.3e-10 69.3 55 56.4
Medtr7g090035 Medicago truncatula HOM05D008152 ORTHO05D010231 1.7e-10 68.9 67 52.2
EL10Ac3g07187 Beta vulgaris HOM05D030312 ORTHO05D027002 2.9e-10 68.2 53 69.8
Lj1g0004562 Lotus japonicus HOM05D008152 ORTHO05D010231 2.9e-10 68.2 67 55.2
RcHm_v2.0_Chr2g0124931 Rosa chinensis HOM05D008152 ORTHO05D010231 2.9e-10 68.2 57 54.4
CAN.G1237.35 Capsicum annuum HOM05D008152 ORTHO05D010231 3.8e-10 67.8 59 52.5
FvH4_6g25100 Fragaria vesca HOM05D008152 ORTHO05D010231 3.8e-10 67.8 57 54.4
Migut.K00109 Erythranthe guttata HOM05D008152 ORTHO05D010231 5.0e-10 67.4 56 53.6
FAN05G4131 Fragaria x ananassa HOM05D008152 ORTHO05D010231 6.5e-10 67.0 54 57.4
THA.LOC104816407 Tarenaya hassleriana HOM05D008152 ORTHO05D010231 6.5e-10 67.0 64 51.6
CSS0018961 Camellia sinensis var. sinensis HOM05D008152 ORTHO05D010231 1.1e-09 66.2 59 54.2
Phvul.001G124150 Phaseolus vulgaris HOM05D008152 ORTHO05D010231 1.1e-09 66.2 66 50.0
Phvul.001G124600 Phaseolus vulgaris HOM05D008152 ORTHO05D010231 1.1e-09 66.2 66 50.0
Gohir.D09G115470 Gossypium hirsutum HOM05D008152 ORTHO05D010231 1.5e-09 65.9 53 50.9
Nn2g14938 Nelumbo nucifera HOM05D008152 ORTHO05D010231 1.9e-09 65.5 66 50.0
Solyc10g084060.2 Solanum lycopersicum HOM05D008152 ORTHO05D010231 1.9e-09 65.5 59 57.6
Gorai.006G133500 Gossypium raimondii HOM05D008152 ORTHO05D010231 2.5e-09 65.1 53 50.9
Ciclev10006402m.g Citrus clementina HOM05D008152 ORTHO05D010231 3.2e-09 64.7 50 56.0
Nn7g36510 Nelumbo nucifera HOM05D008152 ORTHO05D010231 3.2e-09 64.7 67 47.8
CiPaw.09G044200 Carya illinoinensis HOM05D008152 ORTHO05D010231 5.5e-09 63.9 50 58.0
Eucgr.K01615 Eucalyptus grandis HOM05D008152 ORTHO05D010231 5.5e-09 63.9 53 58.5
Prupe.7G046400 Prunus persica HOM05D008152 ORTHO05D010231 5.5e-09 63.9 60 56.7
Psat3g078320 Pisum sativum HOM05D008152 ORTHO05D010231 7.2e-09 63.5 48 56.2
AL6G13710 Arabidopsis lyrata HOM05D008152 ORTHO05D010231 9.4e-09 63.2 62 50.0
CARHR209180 Cardamine hirsuta HOM05D008152 ORTHO05D010231 9.4e-09 63.2 58 50.0
MD00G1073900 Malus domestica HOM05D008152 ORTHO05D010231 1.2e-08 62.8 66 48.5
MD12G1091200 Malus domestica HOM05D008152 ORTHO05D010231 1.2e-08 62.8 66 48.5
BcaB01g05765 Brassica carinata HOM05D008152 ORTHO05D010231 1.6e-08 62.4 53 58.5
Potri.006G043300 Populus trichocarpa HOM05D008152 ORTHO05D010231 1.6e-08 62.4 60 51.7
SalBow6G4146 Salvia bowleyana HOM05D008152 ORTHO05D010231 1.6e-08 62.4 55 50.9
SEGI_34450 Sequoiadendron giganteum HOM05D037356 ORTHO05D010231 2.1e-08 62.0 27 88.9
GSVIVG01033573001 Vitis vinifera HOM05D008152 ORTHO05D010231 2.1e-08 62.0 58 51.7
A03p01520 Brassica napus HOM05D008152 ORTHO05D010231 2.7e-08 61.6 50 58.0
BraA03t09529Z Brassica rapa HOM05D008152 ORTHO05D010231 2.7e-08 61.6 50 58.0
BcaC06g32113 Brassica carinata HOM05D008152 ORTHO05D010231 4.7e-08 60.8 52 57.7
C09p72760 Brassica napus HOM05D008152 ORTHO05D010231 8.0e-08 60.1 57 52.6
BolC2t06131H Brassica oleracea HOM05D008152 ORTHO05D010231 1.0e-07 59.7 55 50.9
EL10Ac3g07188 Beta vulgaris HOM05D030312 ORTHO05D027002 1.8e-07 58.9 48 68.8
FAN09G1661 Fragaria x ananassa HOM05D008152 ORTHO05D010231 1.8e-07 58.9 48 56.2
Manes.08G056600 Manihot esculenta HOM05D008152 ORTHO05D010231 1.8e-07 58.9 59 47.5
C03p01870 Brassica napus HOM05D008152 ORTHO05D010231 3.0e-07 58.2 52 55.8
COL.COLO4_33936 Corchorus olitorius HOM05D008152 ORTHO05D010231 3.0e-07 58.2 59 44.1
Duzib128G1278 Durio zibethinus HOM05D008152 ORTHO05D010231 3.0e-07 58.2 59 44.1
SEGI_27788 Sequoiadendron giganteum HOM05D037356 ORTHO05D010231 5.2e-07 57.4 27 81.5
Thhalv10015225m.g Eutrema salsugineum HOM05D008152 ORTHO05D010231 6.7e-07 57.0 54 46.3
A10p32040 Brassica napus HOM05D008152 ORTHO05D010231 8.8e-07 56.6 53 52.8
BolC9t60014H Brassica oleracea HOM05D008152 ORTHO05D010231 8.8e-07 56.6 53 52.8
BraA10t45248Z Brassica rapa HOM05D008152 ORTHO05D010231 1.5e-06 55.8 70 45.7
BraA02t04797Z Brassica rapa HOM05D008152 ORTHO05D010231 2.0e-06 55.5 51 51.0
SEGI_19797 Sequoiadendron giganteum HOM05D037356 ORTHO05D010231 2.0e-06 55.5 57 47.4
Hund24636 Selenicereus undatus HOM05D030312 ORTHO05D027002 2.6e-06 55.1 53 56.6
Carub.0006s0304 Capsella rubella HOM05D008152 ORTHO05D010231 3.3e-06 54.7 57 47.4


User provided reference genes

Program Settings