Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc13g0001290 Simmondsia chinensis HOM05D066035 ORTHO05D000019 1.5e-109 399.4 195 100.0
Sc13g0001270 Simmondsia chinensis HOM05D066035 ORTHO05D388144 7.4e-11 71.6 38 81.6
Nitab4.5_0001249g0040 Nicotiana tabacum HOM05D000056 ORTHO05D000019 2.4e-09 66.6 186 27.4
Sc13g0001280 Simmondsia chinensis HOM05D000056 ORTHO05D000019 2.4e-09 66.6 49 61.2
Sopen10g029880 Solanum pennellii HOM05D000056 ORTHO05D000019 6.9e-09 65.1 188 24.5
PGSC0003DMG400008173 Solanum tuberosum HOM05D000056 ORTHO05D000019 6.9e-09 65.1 188 24.5
Sc13g0001330 Simmondsia chinensis HOM05D004217 ORTHO05D005561 9.0e-09 64.7 124 33.9
MBI16_g18646_MAGBIO Magnolia biondii HOM05D000056 ORTHO05D000019 1.2e-08 64.3 119 30.3
Solyc10g079230.3 Solanum lycopersicum HOM05D000056 ORTHO05D000019 2.6e-08 63.2 188 23.9
CAN.G641.32 Capsicum annuum HOM05D000056 ORTHO05D000019 3.4e-08 62.8 188 23.9
Oeu023025.1 Olea europaea HOM05D000056 ORTHO05D000019 3.4e-08 62.8 86 34.9
Oeu063753.1 Olea europaea HOM05D000056 ORTHO05D000019 3.4e-08 62.8 123 33.3
Dinv30297 Davidia involucrata HOM05D000056 ORTHO05D000019 4.5e-08 62.4 186 26.3
Aqoxy2G00360 Aquilegia oxysepala HOM05D004808 ORTHO05D005279 7.6e-08 61.6 133 30.1
Potri.016G039800 Populus trichocarpa HOM05D000056 ORTHO05D000019 7.6e-08 61.6 117 31.6
Potri.016G039866 Populus trichocarpa HOM05D000056 ORTHO05D000019 7.6e-08 61.6 117 31.6
Rhsim04G0110200 Rhododendron simsii HOM05D000056 ORTHO05D000019 7.6e-08 61.6 83 36.1
Rhsim04G0110000 Rhododendron simsii HOM05D000056 ORTHO05D000019 1.0e-07 61.2 83 37.3
Dinv08475 Davidia involucrata HOM05D000056 ORTHO05D000019 1.3e-07 60.8 121 33.9
Oeu026328.1 Olea europaea HOM05D000056 ORTHO05D000019 1.7e-07 60.5 84 34.5
Sabra06G0028800 Salix brachista HOM05D000056 ORTHO05D000019 1.7e-07 60.5 131 31.3
ECA248G2296 Erigeron canadensis HOM05D000056 ORTHO05D000019 2.2e-07 60.1 137 28.5
Nitab4.5_0000082g0340 Nicotiana tabacum HOM05D000056 ORTHO05D000019 2.2e-07 60.1 188 25.0
Oeu008203.1 Olea europaea HOM05D000056 ORTHO05D000019 2.2e-07 60.1 119 30.3
Medtr7g060220 Medicago truncatula HOM05D000056 ORTHO05D000019 2.9e-07 59.7 128 30.5
Oeu026334.1 Olea europaea HOM05D000056 ORTHO05D000019 2.9e-07 59.7 86 36.0
Rhsim04G0109800 Rhododendron simsii HOM05D000056 ORTHO05D000019 2.9e-07 59.7 83 34.9
ECA248G1749 Erigeron canadensis HOM05D000056 ORTHO05D000019 4.9e-07 58.9 124 29.8
Oeu038962.1 Olea europaea HOM05D000056 ORTHO05D000019 4.9e-07 58.9 84 35.7
Potri.006G042873 Populus trichocarpa HOM05D000056 ORTHO05D000019 4.9e-07 58.9 210 25.7
Dinv01134 Davidia involucrata HOM05D000056 ORTHO05D000019 6.5e-07 58.5 122 32.0
Dinv01530 Davidia involucrata HOM05D000056 ORTHO05D000019 6.5e-07 58.5 122 32.0
Dinv08474 Davidia involucrata HOM05D000056 ORTHO05D000019 6.5e-07 58.5 122 32.0
Sabra16G0042300 Salix brachista HOM05D000056 ORTHO05D000019 6.5e-07 58.5 118 30.5
Sabra16G0043100 Salix brachista HOM05D000056 ORTHO05D000019 6.5e-07 58.5 129 28.7
GSVIVG01033580001 Vitis vinifera HOM05D000056 ORTHO05D000019 6.5e-07 58.5 123 28.5
Potri.006G042300 Populus trichocarpa HOM05D000056 ORTHO05D000019 8.4e-07 58.2 80 37.5
Dinv01528 Davidia involucrata HOM05D000056 ORTHO05D000019 1.1e-06 57.8 122 30.3
HanXRQChr13g0392041 Helianthus annuus HOM05D000056 ORTHO05D000019 1.1e-06 57.8 114 27.2
Thecc.05G141000 Theobroma cacao HOM05D000056 ORTHO05D000019 1.1e-06 57.8 204 27.9
Aqoxy2G00369 Aquilegia oxysepala HOM05D000056 ORTHO05D000019 1.4e-06 57.4 124 29.8
HanXRQChr13g0393631 Helianthus annuus HOM05D000056 ORTHO05D000019 1.4e-06 57.4 120 28.3
Potri.006G042500 Populus trichocarpa HOM05D000056 ORTHO05D000019 1.4e-06 57.4 80 36.2
QL07p007721 Quercus lobata HOM05D000056 ORTHO05D000019 1.4e-06 57.4 121 28.1
Peaxi162Scf00558g00002 Petunia axillaris HOM05D000056 ORTHO05D000019 2.5e-06 56.6 186 23.7
Peaxi162Scf00558g00004 Petunia axillaris HOM05D000056 ORTHO05D000019 2.5e-06 56.6 186 23.7
Nitab4.5_0005442g0010 Nicotiana tabacum HOM05D000056 ORTHO05D000019 3.2e-06 56.2 190 26.3
Solyc04g008900.4 Solanum lycopersicum HOM05D000056 ORTHO05D000019 3.2e-06 56.2 119 28.6
ATR0561G242 Amborella trichopoda HOM05D000056 ORTHO05D000019 4.2e-06 55.8 111 27.9
CiPaw.09G044600 Carya illinoinensis HOM05D000056 ORTHO05D000019 4.2e-06 55.8 148 25.7
Ciclev10004884m.g Citrus clementina HOM05D000056 ORTHO05D000019 4.2e-06 55.8 187 26.2
ECA248G0725 Erigeron canadensis HOM05D000056 ORTHO05D000019 4.2e-06 55.8 114 28.9
Lsat_1_v5_gn_5_159420 Lactuca sativa HOM05D000056 ORTHO05D000019 4.2e-06 55.8 120 30.8
Dinv08488 Davidia involucrata HOM05D000056 ORTHO05D000019 5.5e-06 55.5 84 35.7
HanXRQChr14g0429871 Helianthus annuus HOM05D000056 ORTHO05D000019 5.5e-06 55.5 128 28.1
Nn2g14822 Nelumbo nucifera HOM05D000056 ORTHO05D000019 5.5e-06 55.5 119 26.9
Dinv08487 Davidia involucrata HOM05D000056 ORTHO05D000019 7.1e-06 55.1 185 24.9
Oeu043102.1 Olea europaea HOM05D000056 ORTHO05D000019 7.1e-06 55.1 84 33.3
Rhsim04G0110100 Rhododendron simsii HOM05D000056 ORTHO05D000019 7.1e-06 55.1 83 33.7
Atru.chr1.1453 Acer truncatum HOM05D000056 ORTHO05D000019 9.3e-06 54.7 183 26.8
Duzib128G0681 Durio zibethinus HOM05D000056 ORTHO05D000019 9.3e-06 54.7 201 26.9
Lsat_1_v5_gn_5_159381 Lactuca sativa HOM05D000056 ORTHO05D000019 9.3e-06 54.7 85 36.5


User provided reference genes

Program Settings