Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc12g0010960 Simmondsia chinensis HOM05D006671 ORTHO05D008637 1.9e-303 1045.0 530 100.0
CSS0038482 Camellia sinensis var. sinensis HOM05D006671 ORTHO05D008637 2.3e-184 649.4 534 59.9
EL10Ac7g18235 Beta vulgaris HOM05D006671 ORTHO05D008637 1.8e-181 639.8 530 62.5
TAR623G0926 Trochodendron aralioides HOM05D006671 ORTHO05D008637 2.5e-178 629.4 532 57.9
vmacro18708 Vaccinium macrocarpon HOM05D006671 ORTHO05D008637 4.3e-178 628.6 536 58.6
Cc04_g00530 Coffea canephora HOM05D006671 ORTHO05D008637 7.3e-178 627.9 533 58.9
COL.COLO4_26801 Corchorus olitorius HOM05D006671 ORTHO05D008637 8.0e-177 624.4 537 59.6
Thecc.06G048900 Theobroma cacao HOM05D006671 ORTHO05D008637 6.8e-176 621.3 533 59.3
CiPaw.03G010100 Carya illinoinensis HOM05D006671 ORTHO05D008637 4.4e-175 618.6 541 57.5
Rhsim08G0246200 Rhododendron simsii HOM05D006671 ORTHO05D008637 5.7e-175 618.2 542 57.7
Sopen12g024210 Solanum pennellii HOM05D006671 ORTHO05D008637 9.8e-175 617.5 532 58.1
PGR119G0898 Punica granatum HOM05D006671 ORTHO05D008637 1.4e-173 613.6 531 57.4
Solyc12g055740.2 Solanum lycopersicum HOM05D006671 ORTHO05D008637 1.4e-173 613.6 532 57.9
Duzib160G0342 Durio zibethinus HOM05D006671 ORTHO05D008637 1.8e-173 613.2 533 58.5
MD09G1171100 Malus domestica HOM05D006671 ORTHO05D008637 3.2e-173 612.5 533 59.5
PGSC0003DMG402028844 Solanum tuberosum HOM05D006671 ORTHO05D008637 3.2e-173 612.5 532 58.6
Manes.11G010600 Manihot esculenta HOM05D006671 ORTHO05D008637 1.2e-172 610.5 539 58.1
Gorai.013G134300 Gossypium raimondii HOM05D006671 ORTHO05D008637 1.0e-171 607.4 538 58.0
Gohir.D13G119900 Gossypium hirsutum HOM05D006671 ORTHO05D008637 1.3e-171 607.1 534 58.1
Phvul.010G121800 Phaseolus vulgaris HOM05D006671 ORTHO05D008637 1.7e-171 606.7 537 57.7
CAN.G390.42 Capsicum annuum HOM05D006671 ORTHO05D008637 5.0e-171 605.1 535 58.3
Thhalv10011378m.g Eutrema salsugineum HOM05D006671 ORTHO05D008637 1.1e-170 604.0 531 55.9
Potri.001G161100 Populus trichocarpa HOM05D006671 ORTHO05D008637 9.5e-170 600.9 530 56.8
Actinidia24409 Actinidia chinensis HOM05D006671 ORTHO05D008637 2.8e-169 599.4 501 60.3
Sp1g40250 Schrenkiella parvula HOM05D006671 ORTHO05D008637 2.8e-169 599.4 530 56.8
TPR.G26443 Trifolium pratense HOM05D006671 ORTHO05D008637 2.8e-169 599.4 535 57.8
BcaB04g17063 Brassica carinata HOM05D006671 ORTHO05D008637 4.7e-169 598.6 530 56.6
Eucgr.I02172 Eucalyptus grandis HOM05D006671 ORTHO05D008637 4.7e-169 598.6 529 56.7
AL1G62410 Arabidopsis lyrata HOM05D006671 ORTHO05D008637 6.2e-169 598.2 534 54.3
PSO017G0187 Papaver somniferum HOM05D006671 ORTHO05D008637 8.0e-169 597.8 540 57.2
SalBow7G2314 Salvia bowleyana HOM05D006671 ORTHO05D008637 1.0e-168 597.4 534 57.5
Atru.chr1.4182 Acer truncatum HOM05D006671 ORTHO05D008637 1.4e-168 597.0 531 59.5
AT1G53710 Arabidopsis thaliana HOM05D006671 ORTHO05D008637 3.1e-168 595.9 531 55.2
BolC3t21495H Brassica oleracea HOM05D006671 ORTHO05D008637 1.5e-167 593.6 531 56.5
Aa31LG10G1550 Aethionema arabicum HOM05D006671 ORTHO05D008637 2.6e-167 592.8 531 56.1
Ciclev10025368m.g Citrus clementina HOM05D006671 ORTHO05D008637 3.4e-167 592.4 530 57.7
PGSC0003DMG401028844 Solanum tuberosum HOM05D006671 ORTHO05D008637 4.4e-167 592.0 532 57.7
Carub.0001s4299 Capsella rubella HOM05D006671 ORTHO05D008637 5.8e-167 591.7 531 54.0
Glyma.16G015100 Glycine max HOM05D006671 ORTHO05D008637 5.8e-167 591.7 540 56.7
Lalb_Chr10g0101031 Lupinus albus HOM05D006671 ORTHO05D008637 5.8e-167 591.7 536 57.6
Prupe.3G029600 Prunus persica HOM05D006671 ORTHO05D008637 5.8e-167 591.7 530 57.0
Psat4g165440 Pisum sativum HOM05D006671 ORTHO05D008637 9.8e-167 590.9 535 57.6
SGA_v2.0_scaffold4G02101 Striga asiatica HOM05D006671 ORTHO05D008637 9.8e-167 590.9 532 57.7
CANSAT56G3116 Cannabis sativa HOM05D006671 ORTHO05D008637 3.7e-166 589.0 534 57.7
A08p01430 Brassica napus HOM05D006671 ORTHO05D008637 6.4e-166 588.2 530 55.3
Medtr8g023620 Medicago truncatula HOM05D006671 ORTHO05D008637 1.1e-165 587.4 536 56.2
MSTRG.9549 Avicennia marina HOM05D006671 ORTHO05D008637 3.2e-165 585.9 533 57.0
BcaC01g01410 Brassica carinata HOM05D006671 ORTHO05D008637 3.2e-165 585.9 530 56.0
Glyma.07G047100 Glycine max HOM05D006671 ORTHO05D008637 7.0e-165 584.7 539 55.5
RcHm_v2.0_Chr2g0148251 Rosa chinensis HOM05D006671 ORTHO05D008637 7.0e-165 584.7 531 57.6
BraA08t32194Z Brassica rapa HOM05D006671 ORTHO05D008637 9.2e-165 584.3 530 54.7
C03p91740 Brassica napus HOM05D006671 ORTHO05D008637 1.2e-164 583.9 530 55.8
Lj3g0013980 Lotus japonicus HOM05D006671 ORTHO05D008637 1.6e-164 583.6 544 55.5
Aqoxy2G04033 Aquilegia oxysepala HOM05D006671 ORTHO05D008637 1.0e-163 580.9 533 55.3
DCAR_007665 Daucus carota HOM05D006671 ORTHO05D008637 1.3e-163 580.5 559 54.0
Migut.D00903 Erythranthe guttata HOM05D006671 ORTHO05D008637 3.9e-163 578.9 531 55.6
AUR62001377 Chenopodium quinoa HOM05D006671 ORTHO05D008637 1.9e-162 576.6 481 62.0
CARHR044010 Cardamine hirsuta HOM05D006671 ORTHO05D008637 4.3e-162 575.5 534 53.7
Ah.08g217540 Amaranthus hybridus HOM05D006671 ORTHO05D008637 7.3e-162 574.7 532 58.5
Nn8g41287 Nelumbo nucifera HOM05D006671 ORTHO05D008637 2.1e-161 573.2 533 53.5
ECA234G0268 Erigeron canadensis HOM05D006671 ORTHO05D008637 2.8e-161 572.8 535 53.6
arahy.Tifrunner.gnm1.ann1.YS0GDU Arachis hypogaea HOM05D006671 ORTHO05D008637 1.4e-160 570.5 535 54.2
arahy.Tifrunner.gnm1.ann1.NMV212 Arachis hypogaea HOM05D006671 ORTHO05D008637 4.0e-160 568.9 535 54.2
TWI59G0357 Tripterygium wilfordii HOM05D006671 ORTHO05D008637 4.0e-160 568.9 532 55.3
AUR62044064 Chenopodium quinoa HOM05D006671 ORTHO05D008637 1.9e-157 560.1 468 62.0
Lj5C27T5 Lonicera japonica HOM05D006671 ORTHO05D008637 3.2e-157 559.3 499 55.9
HPP92_002242 Vanilla planifolia HOM05D006671 ORTHO05D008637 4.1e-157 558.9 532 55.1
FvH4_6g36250 Fragaria vesca HOM05D006671 ORTHO05D008637 9.2e-157 557.8 530 54.9
FAN14G1234 Fragaria x ananassa HOM05D006671 ORTHO05D008637 1.2e-156 557.4 530 54.9
HanXRQChr10g0311581 Helianthus annuus HOM05D006671 ORTHO05D008637 5.1e-155 552.0 535 53.3
Sabra01G0131200 Salix brachista HOM05D006671 ORTHO05D008637 7.3e-154 548.1 574 50.9
Cpa.g.sc229.10 Carica papaya HOM05D006671 ORTHO05D008637 1.2e-153 547.4 535 52.9
Haze_14039 Corylus avellana HOM05D006671 ORTHO05D008637 1.8e-152 543.5 632 48.4
PSO170G0973 Papaver somniferum HOM05D006671 ORTHO05D008637 1.2e-151 540.8 476 56.9
MBI13_g05970_MAGBIO Magnolia biondii HOM05D006671 ORTHO05D008637 3.4e-151 539.3 487 56.9
Os03g0397300 Oryza sativa ssp. japonica HOM05D006671 ORTHO05D008637 3.4e-151 539.3 535 52.3
GSVIVG01026409001 Vitis vinifera HOM05D006671 ORTHO05D008637 3.8e-150 535.8 755 42.4
FAN09G2187 Fragaria x ananassa HOM05D006671 ORTHO05D008637 1.0e-147 527.7 530 53.2
Lsat_1_v5_gn_5_137600 Lactuca sativa HOM05D006671 ORTHO05D008637 1.3e-147 527.3 527 52.8
Zm00001eb392730 Zea mays HOM05D006671 ORTHO05D008637 7.3e-146 521.5 534 51.1
Dinv20369 Davidia involucrata HOM05D006671 ORTHO05D008637 2.1e-145 520.0 367 67.0
CDE06G0010 Ceratophyllum demersum HOM05D006671 ORTHO05D008637 2.9e-142 509.6 478 54.2
FAN14G2634 Fragaria x ananassa HOM05D006671 ORTHO05D008637 3.2e-141 506.1 530 52.1
unitig_699.g19656 Utricularia gibba HOM05D006671 ORTHO05D001254 3.2e-141 506.1 534 50.9
Nitab4.5_0000357g0220 Nicotiana tabacum HOM05D006671 ORTHO05D008637 2.5e-138 496.5 533 50.8
Nitab4.5_0003469g0010 Nicotiana tabacum HOM05D006671 ORTHO05D008637 1.9e-133 480.3 540 50.2
Actinidia33812 Actinidia chinensis HOM05D006671 ORTHO05D008637 1.1e-130 471.1 548 48.7
SEGI_35568 Sequoiadendron giganteum HOM05D006671 ORTHO05D008637 5.3e-128 462.2 455 52.3
Pp3c21_8010 Physcomitrium patens HOM05D006671 ORTHO05D008637 2.1e-124 450.3 535 47.7
Peaxi162Scf00177g00616 Petunia axillaris HOM05D006671 ORTHO05D008637 3.1e-120 436.4 535 47.1
SMO347G0345 Selaginella moellendorffii HOM05D006671 ORTHO05D008637 1.3e-115 421.0 533 43.2
AagrBONN_evm.TU.Sc2ySwM_362.1979 Anthoceros agrestis HOM05D006671 ORTHO05D008637 2.5e-114 416.8 537 43.9
VMungo0331G0057 Vigna mungo HOM05D006671 ORTHO05D008637 1.0e-102 378.3 293 63.8
Hma1.2p1_1104F.1_g257490 Hydrangea macrophylla HOM05D006671 ORTHO05D008637 2.6e-98 363.6 257 70.4
Ca_23471_v3 Cicer arietinum L. HOM05D006671 ORTHO05D008637 7.4e-98 362.1 470 45.7
THA.LOC104822767 Tarenaya hassleriana HOM05D006671 ORTHO05D008637 1.4e-96 357.8 350 52.3
QL03p047059 Quercus lobata HOM05D006671 ORTHO05D008637 1.0e-94 351.7 259 66.8
Mapoly0048s0109 Marchantia polymorpha HOM05D006671 ORTHO05D008637 1.5e-82 311.2 541 35.3
Hma1.2p1_1104F.1_g257500 Hydrangea macrophylla HOM05D006671 ORTHO05D008637 2.7e-76 290.4 267 56.2
Gohir.A13G116750 Gossypium hirsutum HOM05D006671 ORTHO05D008637 2.8e-73 280.4 201 67.2
BcaNung02916 Brassica carinata HOM05D006671 ORTHO05D008637 3.7e-73 280.0 497 36.0
Oeu006761.2 Olea europaea HOM05D006671 ORTHO05D008637 7.0e-72 275.8 281 53.4
QL03p047068 Quercus lobata HOM05D006671 ORTHO05D008637 3.8e-70 270.0 279 51.6
THA.LOC104803433 Tarenaya hassleriana HOM05D006671 ORTHO05D008637 1.5e-66 258.1 184 66.3
FAN02G1271 Fragaria x ananassa HOM05D006671 ORTHO05D008637 3.4e-66 256.9 315 46.3
ATR0006G018 Amborella trichopoda HOM05D006671 ORTHO05D008637 1.0e-59 235.3 266 50.8
SEGI_04788 Sequoiadendron giganteum HOM05D006671 ORTHO05D008637 5.2e-59 233.0 278 45.7
Gohir.A13G116801 Gossypium hirsutum HOM05D006671 ORTHO05D008637 3.2e-56 223.8 251 49.0
MD17G1156100 Malus domestica HOM05D006671 ORTHO05D008637 2.6e-50 204.1 441 33.8
MCO09G741 Micromonas commoda HOM05D006671 ORTHO05D008637 5.0e-46 189.9 436 33.7
Actinidia21851 Actinidia chinensis HOM05D006671 ORTHO05D008637 1.8e-43 181.4 198 51.0
Hund05690 Selenicereus undatus HOM05D006671 ORTHO05D008637 2.9e-41 174.1 122 73.0
HPP92_002174 Vanilla planifolia HOM05D000872 ORTHO05D007886 3.7e-41 173.7 301 37.5
Actinidia21852 Actinidia chinensis HOM05D006671 ORTHO05D008637 7.8e-39 166.0 123 62.6
Cfa022026 Carpinus fangiana HOM05D002393 ORTHO05D123579 2.4e-24 117.9 479 27.1
Lsat_1_v5_gn_2_122021 Lactuca sativa HOM05D006671 ORTHO05D008637 9.0e-19 99.4 148 40.5
FAN05G4676 Fragaria x ananassa HOM05D006671 ORTHO05D008637 6.4e-17 93.2 108 47.2
BcaC09g48416 Brassica carinata HOM05D006671 ORTHO05D027459 5.6e-13 80.1 93 44.1
C01p50010 Brassica napus HOM05D010519 ORTHO05D027459 5.6e-13 80.1 93 44.1
BolC1t04958H Brassica oleracea HOM05D010519 ORTHO05D027459 5.6e-13 80.1 93 44.1
Manes.02G154800 Manihot esculenta HOM05D008167 ORTHO05D010296 2.1e-12 78.2 411 24.1
Lsat_1_v5_gn_1_119700 Lactuca sativa HOM05D006671 ORTHO05D011576 4.8e-12 77.0 85 45.9
CSS0027715 Camellia sinensis var. sinensis HOM05D006671 ORTHO05D008637 1.1e-11 75.9 46 73.9
Lsat_1_v5_gn_2_91241 Lactuca sativa HOM05D006671 ORTHO05D011576 2.4e-11 74.7 84 45.2
Thecc.08G110600 Theobroma cacao HOM05D008167 ORTHO05D010296 3.1e-11 74.3 331 23.3
TAR628G0982 Trochodendron aralioides HOM05D008167 ORTHO05D010296 6.9e-11 73.2 391 22.5
Potri.002G093800 Populus trichocarpa HOM05D008167 ORTHO05D010296 1.5e-10 72.0 324 22.5
Pp3c20_15640 Physcomitrium patens HOM05D008167 ORTHO05D010296 2.0e-10 71.6 376 25.5
Dinv13035 Davidia involucrata HOM05D008167 ORTHO05D010296 1.3e-09 68.9 329 22.8
EL10Ac1g01257 Beta vulgaris HOM05D008167 ORTHO05D010296 1.7e-09 68.6 339 21.8
PSO133G0102 Papaver somniferum HOM05D008167 ORTHO05D010296 1.7e-09 68.6 348 22.7
Lsat_1_v5_gn_0_9700 Lactuca sativa HOM05D008167 ORTHO05D010296 2.2e-09 68.2 386 23.6
Os06g0222800 Oryza sativa ssp. japonica HOM05D008167 ORTHO05D010296 4.9e-09 67.0 324 22.8
arahy.Tifrunner.gnm1.ann1.R32LA5 Arachis hypogaea HOM05D008167 ORTHO05D010296 6.4e-09 66.6 367 22.9
Actinidia10306 Actinidia chinensis HOM05D008167 ORTHO05D010296 8.4e-09 66.2 287 25.4
AUR62027724 Chenopodium quinoa HOM05D008167 ORTHO05D010296 1.4e-08 65.5 341 22.3
GSVIVG01009002001 Vitis vinifera HOM05D008167 ORTHO05D010296 2.4e-08 64.7 273 23.1
QL12p036142 Quercus lobata HOM05D008167 ORTHO05D010296 4.2e-08 63.9 342 22.8
COL.COLO4_16444 Corchorus olitorius HOM05D008167 ORTHO05D010296 7.1e-08 63.2 337 23.7
PSO541G2703 Papaver somniferum HOM05D008167 ORTHO05D010296 2.1e-07 61.6 343 22.7
VMungo0331G0414 Vigna mungo HOM05D008167 ORTHO05D010296 2.7e-07 61.2 290 23.8
Nn1g05299 Nelumbo nucifera HOM05D008167 ORTHO05D010296 4.6e-07 60.5 427 22.5
Lj3g0012000 Lotus japonicus HOM05D008167 ORTHO05D010296 6.0e-07 60.1 150 28.0
RcHm_v2.0_Chr7g0239831 Rosa chinensis HOM05D008167 ORTHO05D010296 6.0e-07 60.1 325 23.1
Prupe.1G513100 Prunus persica HOM05D008167 ORTHO05D010296 1.8e-06 58.5 330 23.3
Lj4C719T5 Lonicera japonica HOM05D008167 ORTHO05D010296 2.3e-06 58.2 313 22.0
HanXRQChr04g0111501 Helianthus annuus HOM05D008167 ORTHO05D010296 3.9e-06 57.4 368 22.3
Medtr8g020400 Medicago truncatula HOM05D008167 ORTHO05D010296 5.1e-06 57.0 358 23.2
MBI02_g36661_MAGBIO Magnolia biondii HOM05D008167 ORTHO05D010296 8.7e-06 56.2 374 20.6


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