Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc12g0008970 Simmondsia chinensis HOM05D004705 ORTHO05D005595 0.0e+00 1315.8 793 100.0
AUR62016408 Chenopodium quinoa HOM05D004705 ORTHO05D005595 1.3e-207 727.2 760 57.6
Hund00574 Selenicereus undatus HOM05D004705 ORTHO05D005595 9.4e-206 721.1 767 55.9
EL10Ac9g21966 Beta vulgaris HOM05D004705 ORTHO05D005595 5.2e-204 715.3 783 56.7
QL05p026953 Quercus lobata HOM05D004705 ORTHO05D005595 1.8e-201 706.8 775 55.2
RcHm_v2.0_Chr2g0137071 Rosa chinensis HOM05D004705 ORTHO05D005595 7.7e-200 701.4 780 52.1
Prupe.3G077300 Prunus persica HOM05D004705 ORTHO05D005595 1.0e-199 701.0 785 51.6
Haze_16487 Corylus avellana HOM05D004705 ORTHO05D005595 3.8e-199 699.1 783 54.8
Thecc.06G077700 Theobroma cacao HOM05D004705 ORTHO05D005595 5.5e-198 695.3 793 51.1
FvH4_6g30700 Fragaria vesca HOM05D004705 ORTHO05D005595 9.4e-198 694.5 785 51.8
CSS0020826 Camellia sinensis var. sinensis HOM05D004705 ORTHO05D005595 1.8e-196 690.3 803 52.6
Cfa002032 Carpinus fangiana HOM05D004705 ORTHO05D005595 2.3e-196 689.9 786 54.7
Dinv38075 Davidia involucrata HOM05D004705 ORTHO05D005595 2.3e-196 689.9 814 51.7
FAN09G0848 Fragaria x ananassa HOM05D004705 ORTHO05D005595 3.0e-196 689.5 780 51.5
CSS0001459 Camellia sinensis var. sinensis HOM05D004705 ORTHO05D005595 2.0e-195 686.8 803 52.4
Potri.003G058600 Populus trichocarpa HOM05D004705 ORTHO05D005595 2.6e-195 686.4 781 51.9
Ciclev10024977m.g Citrus clementina HOM05D004705 ORTHO05D005595 3.4e-195 686.0 788 52.4
CiPaw.01G242500 Carya illinoinensis HOM05D004705 ORTHO05D005595 6.3e-194 681.8 783 53.5
Duzib235G0494 Durio zibethinus HOM05D004705 ORTHO05D005595 3.1e-193 679.5 782 52.2
FAN02G3197 Fragaria x ananassa HOM05D004705 ORTHO05D005595 9.1e-193 677.9 778 51.4
FAN14G4493 Fragaria x ananassa HOM05D004705 ORTHO05D005595 1.2e-192 677.6 752 52.1
Atru.chr1.3167 Acer truncatum HOM05D004705 ORTHO05D005595 4.5e-192 675.6 775 51.0
FAN05G0816 Fragaria x ananassa HOM05D004705 ORTHO05D005595 7.7e-192 674.9 778 50.8
TWI75G0140 Tripterygium wilfordii HOM05D004705 ORTHO05D005595 1.7e-191 673.7 791 54.7
vmacro16932 Vaccinium macrocarpon HOM05D004705 ORTHO05D005595 1.7e-191 673.7 824 50.1
MD17G1201400 Malus domestica HOM05D004705 ORTHO05D005595 8.6e-191 671.4 807 49.3
Gohir.A02G124100 Gossypium hirsutum HOM05D004705 ORTHO05D005595 1.1e-190 671.0 781 51.0
HanXRQChr02g0032571 Helianthus annuus HOM05D004705 ORTHO05D005595 2.5e-190 669.8 776 52.3
GSVIVG01017208001 Vitis vinifera HOM05D004705 ORTHO05D005595 2.5e-190 669.8 754 53.2
Duzib160G0698 Durio zibethinus HOM05D004705 ORTHO05D005595 1.8e-188 663.7 753 51.1
Cc04_g03760 Coffea canephora HOM05D004705 ORTHO05D005595 2.3e-188 663.3 825 49.2
CANSAT56G4120 Cannabis sativa HOM05D004705 ORTHO05D005595 5.2e-188 662.1 788 50.9
TAR626G1984 Trochodendron aralioides HOM05D004705 ORTHO05D005595 5.2e-188 662.1 777 51.4
Glyma.13G362100 Glycine max HOM05D004705 ORTHO05D005595 8.9e-188 661.4 794 54.3
Gohir.D03G064900 Gossypium hirsutum HOM05D004705 ORTHO05D005595 3.4e-187 659.4 818 49.1
Potri.001G175500 Populus trichocarpa HOM05D004705 ORTHO05D005595 5.7e-187 658.7 751 51.1
RhsimUnG0009400 Rhododendron simsii HOM05D004705 ORTHO05D005595 7.5e-187 658.3 868 49.2
TAR383G1056 Trochodendron aralioides HOM05D004705 ORTHO05D005595 1.3e-186 657.5 785 52.6
Gorai.002G057500 Gossypium raimondii HOM05D004705 ORTHO05D005595 2.2e-186 656.8 818 49.0
Lsat_1_v5_gn_1_33801 Lactuca sativa HOM05D004705 ORTHO05D005595 4.1e-185 652.5 777 53.0
Rhsim12G0195000 Rhododendron simsii HOM05D004705 ORTHO05D005595 4.1e-185 652.5 846 49.5
Oeu051920.1 Olea europaea HOM05D004705 ORTHO05D005595 9.2e-185 651.4 832 50.0
Manes.04G119400 Manihot esculenta HOM05D004705 ORTHO05D005595 1.2e-184 651.0 788 50.6
PGSC0003DMG400005697 Solanum tuberosum HOM05D004705 ORTHO05D005595 2.7e-184 649.8 820 48.7
Glyma.15G011700 Glycine max HOM05D004705 ORTHO05D005595 3.5e-184 649.4 795 49.6
Phvul.005G173800 Phaseolus vulgaris HOM05D004705 ORTHO05D005595 3.5e-184 649.4 780 51.4
ECA247G3649 Erigeron canadensis HOM05D004705 ORTHO05D005595 2.9e-183 646.4 799 50.2
Solyc03g119940.3 Solanum lycopersicum HOM05D004705 ORTHO05D005595 4.3e-182 642.5 820 47.7
Sopen03g038820 Solanum pennellii HOM05D004705 ORTHO05D005595 1.6e-181 640.6 820 47.7
Lj3g0018532 Lotus japonicus HOM05D004705 ORTHO05D005595 2.1e-181 640.2 762 49.5
PGR031G3493 Punica granatum HOM05D004705 ORTHO05D005595 2.8e-181 639.8 763 50.7
ClCG07G012910 Citrullus lanatus HOM05D004705 ORTHO05D005595 3.6e-181 639.4 772 49.9
Dinv30551 Davidia involucrata HOM05D004705 ORTHO05D005595 4.7e-181 639.0 768 51.4
AUR62011594 Chenopodium quinoa HOM05D004705 ORTHO05D005595 6.1e-181 638.6 591 59.4
DCAR_025463 Daucus carota HOM05D004705 ORTHO05D005595 8.0e-181 638.3 820 47.7
Sed0012410 Sechium edule HOM05D004705 ORTHO05D005595 1.8e-180 637.1 756 49.7
MELO3C012944.2 Cucumis melo HOM05D004705 ORTHO05D005595 2.3e-180 636.7 782 48.8
CsaV3_3G026670 Cucumis sativus L. HOM05D004705 ORTHO05D005595 2.3e-180 636.7 771 50.3
CAN.G438.96 Capsicum annuum HOM05D004705 ORTHO05D005595 6.8e-180 635.2 810 51.2
Peaxi162Scf00015g00532 Petunia axillaris HOM05D004705 ORTHO05D005595 1.2e-179 634.4 836 46.5
Medtr2g102680 Medicago truncatula HOM05D004705 ORTHO05D005595 1.9e-177 627.1 737 50.5
Lj5A66T57 Lonicera japonica HOM05D004705 ORTHO05D005595 2.0e-176 623.6 817 49.4
Lalb_Chr22g0351091 Lupinus albus HOM05D004705 ORTHO05D005595 4.6e-176 622.5 734 50.4
MSTRG.20727 Avicennia marina HOM05D004705 ORTHO05D005595 1.0e-175 621.3 830 49.4
Aa31LG8G2800 Aethionema arabicum HOM05D004705 ORTHO05D005595 3.0e-175 619.8 764 50.3
Sp3g13840 Schrenkiella parvula HOM05D004705 ORTHO05D005595 5.0e-175 619.0 784 48.1
MSTRG.17159 Avicennia marina HOM05D004705 ORTHO05D005595 1.1e-174 617.8 818 50.2
arahy.Tifrunner.gnm1.ann1.1G4SNU Arachis hypogaea HOM05D004705 ORTHO05D005595 1.5e-174 617.5 759 47.4
SGA_v2.0_scaffold153G36966 Striga asiatica HOM05D004705 ORTHO05D005595 1.5e-174 617.5 797 49.1
arahy.Tifrunner.gnm1.ann1.WXP04W Arachis hypogaea HOM05D004705 ORTHO05D005595 3.3e-174 616.3 756 47.6
Ca_01096_v3 Cicer arietinum L. HOM05D004705 ORTHO05D005595 3.3e-174 616.3 740 49.1
Nitab4.5_0004817g0040 Nicotiana tabacum HOM05D004705 ORTHO05D005595 5.6e-174 615.5 803 47.2
Nn8g39334 Nelumbo nucifera HOM05D004705 ORTHO05D005595 5.2e-172 609.0 776 49.6
TPR.G37249 Trifolium pratense HOM05D004705 ORTHO05D005595 5.2e-172 609.0 760 47.4
Manes.11G049500 Manihot esculenta HOM05D004705 ORTHO05D005595 8.9e-172 608.2 610 55.2
Lalb_Chr24g0395661 Lupinus albus HOM05D004705 ORTHO05D005595 1.5e-171 607.4 610 55.7
Oeu000022.1 Olea europaea HOM05D004705 ORTHO05D005595 2.6e-171 606.7 805 48.8
CARHR090640 Cardamine hirsuta HOM05D004705 ORTHO05D005595 7.5e-171 605.1 760 47.4
AL3G28180 Arabidopsis lyrata HOM05D004705 ORTHO05D005595 9.8e-171 604.7 770 50.1
Carub.0003s1530 Capsella rubella HOM05D004705 ORTHO05D005595 2.4e-169 600.1 780 47.2
Aqoxy7G01953 Aquilegia oxysepala HOM05D004705 ORTHO05D005595 4.1e-169 599.4 800 46.4
AT3G15550 Arabidopsis thaliana HOM05D004705 ORTHO05D005595 4.1e-169 599.4 773 48.6
A05p33830 Brassica napus HOM05D004705 ORTHO05D005595 2.7e-168 596.7 773 48.0
VMungo1080G1183 Vigna mungo HOM05D004705 ORTHO05D005595 3.5e-168 596.3 783 51.2
THA.LOC104818041 Tarenaya hassleriana HOM05D004705 ORTHO05D005595 5.6e-166 589.0 772 47.3
BraA01t03898Z Brassica rapa HOM05D004705 ORTHO05D005595 9.5e-166 588.2 760 47.1
Psat5g299960 Pisum sativum HOM05D004705 ORTHO05D005595 1.6e-165 587.4 584 54.8
C01p48810 Brassica napus HOM05D004705 ORTHO05D005595 2.1e-165 587.0 760 47.0
C05p51460 Brassica napus HOM05D004705 ORTHO05D005595 4.7e-165 585.9 755 47.2
BcaC05g28954 Brassica carinata HOM05D004705 ORTHO05D005595 6.2e-165 585.5 754 46.8
A01p38480 Brassica napus HOM05D004705 ORTHO05D005595 1.8e-164 583.9 758 47.0
Thhalv10020202m.g Eutrema salsugineum HOM05D004705 ORTHO05D005595 2.3e-164 583.6 771 47.3
BcaC09g48528 Brassica carinata HOM05D004705 ORTHO05D005595 4.0e-164 582.8 758 47.0
BcaB06g29595 Brassica carinata HOM05D004705 ORTHO05D005595 2.0e-163 580.5 764 47.8
arahy.Tifrunner.gnm1.ann1.HFN88V Arachis hypogaea HOM05D004705 ORTHO05D005595 4.9e-162 575.9 742 51.3
BolC1t04836H Brassica oleracea HOM05D004705 ORTHO05D005595 1.4e-161 574.3 760 46.6
SalBow5G4930 Salvia bowleyana HOM05D004705 ORTHO05D005595 1.3e-159 567.8 640 52.3
BraA05t22205Z Brassica rapa HOM05D004705 ORTHO05D005595 5.1e-159 565.8 756 46.0
PSO170G5959 Papaver somniferum HOM05D004705 ORTHO05D005595 4.3e-158 562.8 788 45.6
Eucgr.J03029 Eucalyptus grandis HOM05D004705 ORTHO05D005595 7.3e-158 562.0 752 46.7
BcaB04g20914 Brassica carinata HOM05D004705 ORTHO05D005595 4.7e-157 559.3 753 46.3
BolC5t33833H Brassica oleracea HOM05D004705 ORTHO05D005595 5.8e-155 552.4 761 45.7
PSO017G1026 Papaver somniferum HOM05D004705 ORTHO05D005595 1.3e-154 551.2 781 44.7
Sabra01G0137000 Salix brachista HOM05D004705 ORTHO05D005595 1.4e-153 547.7 605 51.6
MBI04_g43364_MAGBIO Magnolia biondii HOM05D004705 ORTHO05D005595 1.9e-153 547.4 852 43.1
Cpa.g.c32383.1 Carica papaya HOM05D004705 ORTHO05D005595 7.3e-150 535.4 699 47.9
COL.COLO4_12857 Corchorus olitorius HOM05D004705 ORTHO05D005595 7.3e-150 535.4 746 45.4
arahy.Tifrunner.gnm1.ann1.AD4PBH Arachis hypogaea HOM05D004705 ORTHO05D005595 4.9e-146 522.7 742 48.8
unitig_26.g8885 Utricularia gibba HOM05D004705 ORTHO05D005595 3.2e-145 520.0 602 49.8
Lalb_Chr25g0279551 Lupinus albus HOM05D004705 ORTHO05D005595 3.6e-141 506.5 702 44.7
Nitab4.5_0000410g0340 Nicotiana tabacum HOM05D004705 ORTHO05D005595 4.8e-141 506.1 442 60.0
Ah.01g021140 Amaranthus hybridus HOM05D004705 ORTHO05D005595 7.6e-139 498.8 749 47.3
Nn2g11880 Nelumbo nucifera HOM05D004705 ORTHO05D005595 1.3e-138 498.0 601 48.9
ATR0083G057 Amborella trichopoda HOM05D004705 ORTHO05D005595 6.7e-135 485.7 854 40.2
Migut.B01589 Erythranthe guttata HOM05D004705 ORTHO05D005595 2.8e-133 480.3 744 42.5
Os01g0176500 Oryza sativa ssp. japonica HOM05D004705 ORTHO05D005595 1.2e-131 474.9 562 49.3
Zm00001eb122560 Zea mays HOM05D004705 ORTHO05D005595 2.1e-128 464.2 623 46.1
THA.LOC104812485 Tarenaya hassleriana HOM05D004705 ORTHO05D005595 5.5e-121 439.5 431 52.7
CDE01G0719 Ceratophyllum demersum HOM05D004705 ORTHO05D005595 1.2e-115 421.8 768 38.0
unitig_61.g26415 Utricularia gibba HOM05D004705 ORTHO05D005595 7.4e-110 402.5 423 53.4
SEGI_27484 Sequoiadendron giganteum HOM05D004705 ORTHO05D005595 4.2e-105 386.7 672 38.8
SEGI_13982 Sequoiadendron giganteum HOM05D004705 ORTHO05D005595 1.4e-92 345.1 474 42.4
AagrBONN_evm.TU.Sc2ySwM_228.3613 Anthoceros agrestis HOM05D004705 ORTHO05D005595 6.3e-85 319.7 505 39.4
MBI01_g15493_MAGBIO Magnolia biondii HOM05D004705 ORTHO05D005595 8.0e-80 302.8 704 33.5
Actinidia16007 Actinidia chinensis HOM05D004705 ORTHO05D005595 1.4e-79 302.0 299 52.8
Pp3c23_2990 Physcomitrium patens HOM05D004705 ORTHO05D005595 4.0e-79 300.4 481 38.7
Pp3c8_15560 Physcomitrium patens HOM05D004705 ORTHO05D005595 5.7e-78 296.6 479 38.2
Pp3c13_19170 Physcomitrium patens HOM05D004705 ORTHO05D005595 2.2e-77 294.7 637 33.8
Pp3c20_1400 Physcomitrium patens HOM05D004705 ORTHO05D005595 3.1e-76 290.8 482 36.7
Pp3c20_1403 Physcomitrium patens HOM05D004705 ORTHO05D005595 3.1e-76 290.8 482 36.7
Pp3c23_18290 Physcomitrium patens HOM05D004705 ORTHO05D005595 2.3e-74 284.6 447 37.6
Pp3c8_22450 Physcomitrium patens HOM05D004705 ORTHO05D005595 8.9e-71 272.7 483 36.4
Pp3c24_17130 Physcomitrium patens HOM05D004705 ORTHO05D005595 1.8e-68 265.0 467 37.3
SMO147G0411 Selaginella moellendorffii HOM05D004705 ORTHO05D005595 9.5e-57 226.1 190 54.7
CDE02G1329 Ceratophyllum demersum HOM05D004705 ORTHO05D005595 8.1e-56 223.0 488 32.6
SHI09686 Sapria himalayana HOM05D004705 ORTHO05D005595 2.2e-53 214.9 624 33.3
MBI04_g47892_MAGBIO Magnolia biondii HOM05D004705 ORTHO05D005595 1.7e-50 205.3 518 41.7
Lj8C335T16 Lonicera japonica HOM05D004705 ORTHO05D005595 5.1e-50 203.8 391 41.7
Actinidia08822 Actinidia chinensis HOM05D004705 ORTHO05D005595 4.8e-32 144.1 161 53.4
BcaC09g48527 Brassica carinata HOM05D004705 ORTHO05D005595 5.4e-28 130.6 92 62.0
Actinidia16006 Actinidia chinensis HOM05D004705 ORTHO05D005595 2.0e-22 112.1 412 31.3
Medtr1g107505 Medicago truncatula HOM05D004705 ORTHO05D005595 9.6e-17 93.2 72 61.1
Nitab4.5_0000410g0350 Nicotiana tabacum HOM05D004705 ORTHO05D005595 1.1e-15 89.7 407 31.2
GSVIVG01017207001 Vitis vinifera HOM05D029100 ORTHO05D016439 1.5e-14 85.9 109 43.1
MBI04_g47893_MAGBIO Magnolia biondii HOM05D004705 ORTHO05D005595 5.8e-14 84.0 54 64.8
Cpa.g.c42332 Carica papaya HOM05D004705 ORTHO05D005595 2.5e-09 68.6 53 54.7
FAN08G3635 Fragaria x ananassa HOM05D004705 ORTHO05D000113 4.8e-08 64.3 50 52.0
FAN15G3749 Fragaria x ananassa HOM05D005026 ORTHO05D005981 4.8e-08 64.3 50 52.0
FAN21G1601 Fragaria x ananassa HOM05D000031 ORTHO05D000030 3.1e-07 61.6 50 50.0
FAN07G2703 Fragaria x ananassa HOM05D004705 ORTHO05D005595 4.1e-07 61.2 50 50.0
Ah.06g184670 Amaranthus hybridus HOM05D004705 ORTHO05D005595 3.4e-06 58.2 43 65.1
Medtr1g041460 Medicago truncatula HOM05D004705 ORTHO05D005595 3.4e-06 58.2 50 56.0


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