Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc12g0008470 Simmondsia chinensis HOM05D005915 ORTHO05D007239 4.0e-115 418.3 244 100.0
Dinv23302 Davidia involucrata HOM05D005915 ORTHO05D007239 3.8e-41 172.6 260 45.8
EL10As5g23598 Beta vulgaris HOM05D005915 ORTHO05D007239 7.2e-40 168.3 229 47.6
Ah.05g171200 Amaranthus hybridus HOM05D005915 ORTHO05D007239 2.2e-36 156.8 171 63.7
vmacro19042 Vaccinium macrocarpon HOM05D005915 ORTHO05D007239 4.1e-35 152.5 192 52.1
Actinidia25458 Actinidia chinensis HOM05D005915 ORTHO05D007239 9.2e-35 151.4 212 47.6
Rhsim08G0207800 Rhododendron simsii HOM05D005915 ORTHO05D007239 2.3e-33 146.7 235 45.5
Lsat_1_v5_gn_4_85741 Lactuca sativa HOM05D005915 ORTHO05D007239 4.7e-31 139.0 198 46.0
Duzib235G0368 Durio zibethinus HOM05D005915 ORTHO05D007239 8.0e-31 138.3 256 46.1
AUR62022762 Chenopodium quinoa HOM05D005915 ORTHO05D007239 2.3e-30 136.7 240 50.0
AUR62027568 Chenopodium quinoa HOM05D005915 ORTHO05D007239 2.3e-30 136.7 208 54.3
Nitab4.5_0001454g0070 Nicotiana tabacum HOM05D005915 ORTHO05D007239 2.3e-30 136.7 236 42.8
Nitab4.5_0009423g0020 Nicotiana tabacum HOM05D005915 ORTHO05D007239 4.0e-30 136.0 237 46.8
MELO3C017835.2 Cucumis melo HOM05D005915 ORTHO05D007239 5.2e-30 135.6 210 45.7
Nn2g12284 Nelumbo nucifera HOM05D005915 ORTHO05D007239 5.2e-30 135.6 278 40.6
CsaV3_4G002020 Cucumis sativus L. HOM05D005915 ORTHO05D007239 2.0e-29 133.7 210 45.2
Thecc.06G038900 Theobroma cacao HOM05D005915 ORTHO05D007239 2.6e-29 133.3 123 59.3
Migut.D01097 Erythranthe guttata HOM05D005915 ORTHO05D007239 3.4e-29 132.9 176 47.2
SGA_v2.0_scaffold89G27484 Striga asiatica HOM05D005915 ORTHO05D007239 4.4e-29 132.5 219 47.0
TAR633G0597 Trochodendron aralioides HOM05D005915 ORTHO05D007239 4.4e-29 132.5 253 39.1
PSO063G1890 Papaver somniferum HOM05D005915 ORTHO05D007239 9.8e-29 131.3 160 48.8
HanXRQChr04g0107231 Helianthus annuus HOM05D005915 ORTHO05D007239 1.3e-28 131.0 167 48.5
Potri.003G180500 Populus trichocarpa HOM05D005915 ORTHO05D007239 2.9e-28 129.8 210 51.0
Hund00452 Selenicereus undatus HOM05D005915 ORTHO05D007239 4.9e-28 129.0 265 44.2
MSTRG.4689 Avicennia marina HOM05D005915 ORTHO05D007239 8.3e-28 128.3 232 45.7
COL.COLO4_26669 Corchorus olitorius HOM05D005915 ORTHO05D007239 1.1e-27 127.9 251 42.6
Aqoxy7G03485 Aquilegia oxysepala HOM05D005915 ORTHO05D007239 1.4e-27 127.5 139 51.8
Manes.11G064500 Manihot esculenta HOM05D005915 ORTHO05D007239 1.4e-27 127.5 222 42.8
Solyc03g117090.3 Solanum lycopersicum HOM05D005915 ORTHO05D007239 1.4e-27 127.5 251 39.8
CANSAT56G1340 Cannabis sativa HOM05D005915 ORTHO05D007239 1.9e-27 127.1 236 44.1
CiPaw.01G253100 Carya illinoinensis HOM05D005915 ORTHO05D007239 1.9e-27 127.1 185 47.0
Gohir.A09G090900 Gossypium hirsutum HOM05D005915 ORTHO05D007239 2.4e-27 126.7 230 43.5
Sabra01G0033000 Salix brachista HOM05D005915 ORTHO05D007239 4.1e-27 125.9 242 47.5
PGSC0003DMG400014193 Solanum tuberosum HOM05D005915 ORTHO05D007239 4.1e-27 125.9 245 41.2
Ciclev10026473m.g Citrus clementina HOM05D005915 ORTHO05D007239 5.4e-27 125.6 214 51.9
Gorai.006G107100 Gossypium raimondii HOM05D005915 ORTHO05D007239 5.4e-27 125.6 239 45.6
QL02p069532 Quercus lobata HOM05D005915 ORTHO05D007239 5.4e-27 125.6 232 43.1
Sopen03g036000 Solanum pennellii HOM05D005915 ORTHO05D007239 5.4e-27 125.6 251 39.0
ClCG07G012140 Citrullus lanatus HOM05D005915 ORTHO05D007239 7.0e-27 125.2 247 38.9
Gohir.D09G090900 Gossypium hirsutum HOM05D005915 ORTHO05D007239 1.2e-26 124.4 238 45.8
PSO782G5373 Papaver somniferum HOM05D005915 ORTHO05D007239 1.2e-26 124.4 177 44.6
Prupe.7G069400 Prunus persica HOM05D005915 ORTHO05D007239 1.6e-26 124.0 192 49.5
SHI11251 Sapria himalayana HOM05D005915 ORTHO05D007239 1.6e-26 124.0 173 46.8
ECA232G2243 Erigeron canadensis HOM05D005915 ORTHO05D007239 2.0e-26 123.6 194 43.8
Ca_20554_v3 Cicer arietinum L. HOM05D005915 ORTHO05D007239 7.8e-26 121.7 235 39.1
TPR.G38763 Trifolium pratense HOM05D005915 ORTHO05D007239 7.8e-26 121.7 224 41.1
VMungo0331G1031 Vigna mungo HOM05D005915 ORTHO05D007239 3.0e-25 119.8 258 39.9
arahy.Tifrunner.gnm1.ann1.DN9Y4W Arachis hypogaea HOM05D005915 ORTHO05D007239 6.6e-25 118.6 235 43.4
arahy.Tifrunner.gnm1.ann1.2L8LZM Arachis hypogaea HOM05D005915 ORTHO05D007239 1.1e-24 117.9 235 43.8
MD17G1221100 Malus domestica HOM05D005915 ORTHO05D007239 1.1e-24 117.9 205 40.0
Oeu033656.3 Olea europaea HOM05D005915 ORTHO05D007239 1.9e-24 117.1 209 43.1
HPP92_016367 Vanilla planifolia HOM05D005915 ORTHO05D007239 4.3e-24 115.9 237 40.1
BcaC08g45335 Brassica carinata HOM05D005915 ORTHO05D007239 5.6e-24 115.5 195 42.6
PGR102G1994 Punica granatum HOM05D005915 ORTHO05D007239 7.3e-24 115.2 235 42.1
Sed0026009 Sechium edule HOM05D005915 ORTHO05D007239 7.3e-24 115.2 248 38.3
BolC6t38110H Brassica oleracea HOM05D005915 ORTHO05D007239 9.5e-24 114.8 206 41.7
PGR142G0337 Punica granatum HOM05D005915 ORTHO05D007239 1.2e-23 114.4 186 41.4
Eucgr.J03100 Eucalyptus grandis HOM05D005915 ORTHO05D007239 1.6e-23 114.0 165 53.9
BraA07t32004Z Brassica rapa HOM05D005915 ORTHO05D007239 2.8e-23 113.2 216 42.6
HanXRQChr09g0274531 Helianthus annuus HOM05D005915 ORTHO05D007239 2.8e-23 113.2 80 71.2
Phvul.010G159800 Phaseolus vulgaris HOM05D005915 ORTHO05D007239 2.8e-23 113.2 256 39.8
TWI12G0041 Tripterygium wilfordii HOM05D005915 ORTHO05D007239 2.8e-23 113.2 175 44.0
THA.LOC104812439 Tarenaya hassleriana HOM05D005915 ORTHO05D007239 3.6e-23 112.8 216 42.6
Lj3g0003301 Lotus japonicus HOM05D005915 ORTHO05D007239 4.7e-23 112.5 233 38.2
AT1G80700 Arabidopsis thaliana HOM05D005915 ORTHO05D007239 6.2e-23 112.1 213 37.6
C06p29450 Brassica napus HOM05D005915 ORTHO05D007239 6.2e-23 112.1 206 41.7
TWI18G1314 Tripterygium wilfordii HOM05D005915 ORTHO05D007239 8.0e-23 111.7 235 38.3
A07p44990 Brassica napus HOM05D005915 ORTHO05D007239 1.1e-22 111.3 216 42.6
Thhalv10019105m.g Eutrema salsugineum HOM05D005915 ORTHO05D007239 1.1e-22 111.3 215 45.1
Sp5g35050 Schrenkiella parvula HOM05D005915 ORTHO05D007239 1.1e-22 111.3 220 44.5
Atru.chr6.915 Acer truncatum HOM05D005915 ORTHO05D007239 1.4e-22 110.9 233 42.9
Aa31LG4G980 Aethionema arabicum HOM05D005915 ORTHO05D007239 2.3e-22 110.2 211 44.5
BcaB02g07251 Brassica carinata HOM05D005915 ORTHO05D007239 2.3e-22 110.2 208 43.8
CSS0040460 Camellia sinensis var. sinensis HOM05D005915 ORTHO05D007239 2.3e-22 110.2 170 51.2
AT1G80980 Arabidopsis thaliana HOM05D005915 ORTHO05D007239 4.0e-22 109.4 213 37.1
FvH4_5g29190 Fragaria vesca HOM05D005915 ORTHO05D007239 4.0e-22 109.4 232 39.7
Glyma.08G216900 Glycine max HOM05D005915 ORTHO05D007239 4.0e-22 109.4 269 36.4
BolC6t40396H Brassica oleracea HOM05D005915 ORTHO05D007239 5.2e-22 109.0 216 40.7
AL2G40740 Arabidopsis lyrata HOM05D005915 ORTHO05D007239 1.2e-21 107.8 199 40.7
TPR.G17738 Trifolium pratense HOM05D005915 ORTHO05D007239 1.5e-21 107.5 224 39.3
A07p26820 Brassica napus HOM05D005915 ORTHO05D007239 2.6e-21 106.7 209 42.6
Lalb_Chr01g0012181 Lupinus albus HOM05D005915 ORTHO05D007239 2.6e-21 106.7 245 43.7
Potri.001G047700 Populus trichocarpa HOM05D005915 ORTHO05D007239 2.6e-21 106.7 225 44.0
BraA07t30325Z Brassica rapa HOM05D005915 ORTHO05D007239 3.4e-21 106.3 206 39.3
unitig_736.g22803 Utricularia gibba HOM05D005915 ORTHO05D007239 3.4e-21 106.3 173 42.8
Oeu008050.2 Olea europaea HOM05D005915 ORTHO05D007239 4.4e-21 105.9 155 49.0
C06p53780 Brassica napus HOM05D005915 ORTHO05D007239 7.5e-21 105.1 225 40.4
ATR1120G130 Amborella trichopoda HOM05D005915 ORTHO05D007239 2.9e-20 103.2 135 62.2
Medtr8g060830 Medicago truncatula HOM05D005915 ORTHO05D007239 2.9e-20 103.2 233 40.8
Medtr4g006550 Medicago truncatula HOM05D005915 ORTHO05D007239 6.4e-20 102.1 234 40.2
PSO339G3366 Papaver somniferum HOM05D005915 ORTHO05D007239 6.4e-20 102.1 149 45.6
Psat7g259880 Pisum sativum HOM05D005915 ORTHO05D007239 1.9e-19 100.5 232 40.1
SEGI_14387 Sequoiadendron giganteum HOM05D005915 ORTHO05D007239 1.9e-19 100.5 200 39.5
BcaC08g47553 Brassica carinata HOM05D005915 ORTHO05D007239 2.4e-19 100.1 214 40.2
Carub.0002s2685 Capsella rubella HOM05D005915 ORTHO05D007239 2.4e-19 100.1 197 39.1
RcHm_v2.0_Chr7g0221831 Rosa chinensis HOM05D005915 ORTHO05D007239 7.0e-19 98.6 185 41.6
Nitab4.5_0004330g0010 Nicotiana tabacum HOM05D005915 ORTHO05D007239 2.7e-18 96.7 108 56.5
CDE05G3202 Ceratophyllum demersum HOM05D005915 ORTHO05D007239 7.8e-18 95.1 97 64.9
Zm00001eb174980 Zea mays HOM05D005915 ORTHO05D007239 2.3e-17 93.6 110 57.3
Cc04_g04930 Coffea canephora HOM05D005915 ORTHO05D007239 1.2e-15 87.8 146 43.2
SalBow6G5910 Salvia bowleyana HOM05D005915 ORTHO05D007239 8.1e-15 85.1 256 30.9
Dinv21397 Davidia involucrata HOM05D005915 ORTHO05D007239 1.4e-14 84.3 254 33.5
GSVIVG01017559001 Vitis vinifera HOM05D005915 ORTHO05D007239 8.9e-14 81.6 147 44.9
Mapoly0140s0034 Marchantia polymorpha HOM05D005915 ORTHO05D007239 1.2e-13 81.3 91 48.4
FAN18G1559 Fragaria x ananassa HOM05D005915 ORTHO05D007239 4.4e-13 79.3 175 42.3
Pp3c9_20610 Physcomitrium patens HOM05D005915 ORTHO05D007239 2.4e-11 73.6 175 35.4
Os08g0278100 Oryza sativa ssp. japonica HOM05D005915 ORTHO05D007239 3.2e-11 73.2 168 37.5
Glyma.07G025532 Glycine max HOM05D005915 ORTHO05D007239 4.1e-11 72.8 98 42.9
GSVIVG01017558001 Vitis vinifera HOM05D005915 ORTHO05D007239 1.2e-10 71.2 93 43.0
Peaxi162Scf00332g00322 Petunia axillaris HOM05D005915 ORTHO05D007239 2.1e-10 70.5 171 33.3
Prupe.1G199000 Prunus persica HOM05D005915 ORTHO05D007239 3.5e-10 69.7 106 50.0
CARHR073810 Cardamine hirsuta HOM05D005915 ORTHO05D007239 1.0e-09 68.2 99 38.4
QL05p035112 Quercus lobata HOM05D005915 ORTHO05D007239 1.7e-09 67.4 34 94.1
TAR625G0588 Trochodendron aralioides HOM05D005915 ORTHO05D007239 2.3e-09 67.0 89 41.6
BolC3t13327H Brassica oleracea HOM05D005915 ORTHO05D007239 2.1e-07 60.5 97 42.3
FAN08G0623 Fragaria x ananassa HOM05D005915 ORTHO05D007239 2.1e-07 60.5 285 29.5
Ah.05g171290 Amaranthus hybridus HOM05D005915 ORTHO05D007239 6.2e-07 58.9 109 43.1
Cpa.g.sc0.147 Carica papaya HOM05D005915 ORTHO05D007239 3.1e-06 56.6 134 39.6


User provided reference genes

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