Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc12g0007720 Simmondsia chinensis HOM05D004512 ORTHO05D005355 2.3e-59 231.9 107 100.0
Gohir.A09G047600 Gossypium hirsutum HOM05D004512 ORTHO05D005355 6.8e-51 203.8 107 86.9
Gohir.D09G048700 Gossypium hirsutum HOM05D004512 ORTHO05D005355 6.8e-51 203.8 107 86.9
AUR62029861 Chenopodium quinoa HOM05D004512 ORTHO05D005355 1.2e-50 203.0 107 86.0
MELO3C002086.2 Cucumis melo HOM05D004512 ORTHO05D005355 3.4e-50 201.4 107 86.9
CsaV3_1G006620 Cucumis sativus L. HOM05D004512 ORTHO05D005355 3.4e-50 201.4 107 86.9
Eucgr.K02221 Eucalyptus grandis HOM05D004512 ORTHO05D005355 3.4e-50 201.4 107 82.2
Duzib068G0917 Durio zibethinus HOM05D004512 ORTHO05D005355 4.4e-50 201.1 107 85.0
PGR142G1335 Punica granatum HOM05D004512 ORTHO05D005355 4.4e-50 201.1 107 84.1
Duzib205G0602 Durio zibethinus HOM05D004512 ORTHO05D005355 5.8e-50 200.7 107 85.0
Duzib205G1322 Durio zibethinus HOM05D004512 ORTHO05D005355 5.8e-50 200.7 107 85.0
Gohir.A08G094600 Gossypium hirsutum HOM05D004512 ORTHO05D005355 5.8e-50 200.7 107 85.0
Thecc.03G034700 Theobroma cacao HOM05D004512 ORTHO05D005355 5.8e-50 200.7 107 85.0
AUR62025859 Chenopodium quinoa HOM05D004512 ORTHO05D005355 7.5e-50 200.3 107 85.0
CiPaw.16G085900 Carya illinoinensis HOM05D004512 ORTHO05D005355 9.9e-50 199.9 107 85.0
Ca_25495_v3 Cicer arietinum L. HOM05D004512 ORTHO05D005355 1.3e-49 199.5 107 82.2
Gohir.D08G105800 Gossypium hirsutum HOM05D004512 ORTHO05D005355 2.2e-49 198.7 107 85.0
Gorai.004G113100 Gossypium raimondii HOM05D004512 ORTHO05D005355 2.2e-49 198.7 107 85.0
Hund02392 Selenicereus undatus HOM05D004512 ORTHO05D005355 3.7e-49 198.0 103 84.5
Manes.05G137500 Manihot esculenta HOM05D004512 ORTHO05D005355 4.9e-49 197.6 107 84.1
Phvul.004G157200 Phaseolus vulgaris HOM05D004512 ORTHO05D005355 4.9e-49 197.6 107 82.2
TPR.G27937 Trifolium pratense HOM05D004512 ORTHO05D005355 4.9e-49 197.6 106 81.1
Atru.chr9.839 Acer truncatum HOM05D004512 ORTHO05D005355 8.3e-49 196.8 107 81.3
EL10Ac5g11436 Beta vulgaris HOM05D004512 ORTHO05D005355 8.3e-49 196.8 107 81.3
CiPaw.15G130400 Carya illinoinensis HOM05D004512 ORTHO05D005355 8.3e-49 196.8 107 81.3
VMungo0464G1721 Vigna mungo HOM05D004512 ORTHO05D005355 1.1e-48 196.4 107 82.2
Glyma.09G184500 Glycine max HOM05D004512 ORTHO05D005355 1.4e-48 196.1 107 81.3
Lalb_Chr22g0353061 Lupinus albus HOM05D004512 ORTHO05D005355 3.2e-48 194.9 107 80.4
QL10p025263 Quercus lobata HOM05D004512 ORTHO05D005355 4.1e-48 194.5 107 83.2
Manes.01G011800 Manihot esculenta HOM05D004512 ORTHO05D005355 5.4e-48 194.1 107 82.2
Sed0004773 Sechium edule HOM05D004512 ORTHO05D005355 9.2e-48 193.4 106 81.1
Cpa.g.sc3.515 Carica papaya HOM05D004512 ORTHO05D005355 1.6e-47 192.6 107 80.4
Hma1.2p1_0653F.1_g196320 Hydrangea macrophylla HOM05D004512 ORTHO05D005355 2.7e-47 191.8 102 85.3
Ciclev10022984m.g Citrus clementina HOM05D004512 ORTHO05D005355 7.8e-47 190.3 106 79.2
Prupe.5G221100 Prunus persica HOM05D004512 ORTHO05D005355 1.0e-46 189.9 107 78.5
Cfa019782 Carpinus fangiana HOM05D004512 ORTHO05D005355 1.3e-46 189.5 107 83.2
Haze_18669 Corylus avellana HOM05D004512 ORTHO05D005355 1.3e-46 189.5 107 83.2
Gorai.006G061400 Gossypium raimondii HOM05D004512 ORTHO05D005355 1.7e-46 189.1 97 87.6
DCAR_011353 Daucus carota HOM05D004512 ORTHO05D005355 2.3e-46 188.7 106 81.1
Potri.012G056900 Populus trichocarpa HOM05D004512 ORTHO05D005355 2.3e-46 188.7 108 79.6
Potri.015G054700 Populus trichocarpa HOM05D004512 ORTHO05D005355 3.0e-46 188.3 108 80.6
Lalb_Chr24g0397761 Lupinus albus HOM05D004512 ORTHO05D005355 3.9e-46 188.0 107 77.6
arahy.Tifrunner.gnm1.ann1.HI5GUI Arachis hypogaea HOM05D004512 ORTHO05D005355 5.1e-46 187.6 97 85.6
arahy.Tifrunner.gnm1.ann1.K20T5Q Arachis hypogaea HOM05D004512 ORTHO05D005355 5.1e-46 187.6 97 85.6
Glyma.07G091500 Glycine max HOM05D004512 ORTHO05D005355 1.1e-45 186.4 97 84.5
Sabra12G0040400 Salix brachista HOM05D004512 ORTHO05D005355 1.1e-45 186.4 108 79.6
Psat1g037680 Pisum sativum HOM05D004512 ORTHO05D005355 1.5e-45 186.0 96 84.4
ClCG00G005470 Citrullus lanatus HOM05D004512 ORTHO05D005355 1.9e-45 185.7 96 87.5
ClCG04G011140 Citrullus lanatus HOM05D004512 ORTHO05D005355 1.9e-45 185.7 96 87.5
Cc04_g07140 Coffea canephora HOM05D004512 ORTHO05D005355 2.5e-45 185.3 107 81.3
DCAR_015141 Daucus carota HOM05D004512 ORTHO05D005355 2.5e-45 185.3 100 84.0
ECA233G5146 Erigeron canadensis HOM05D004512 ORTHO05D005355 2.5e-45 185.3 100 85.0
CSS0004107 Camellia sinensis var. sinensis HOM05D004512 ORTHO05D005355 4.3e-45 184.5 102 84.3
Lsat_1_v5_gn_8_144301 Lactuca sativa HOM05D004512 ORTHO05D005355 5.6e-45 184.1 99 85.9
TAR374G1478 Trochodendron aralioides HOM05D004512 ORTHO05D005355 5.6e-45 184.1 102 81.4
Sopen12g018390 Solanum pennellii HOM05D004512 ORTHO05D005355 7.3e-45 183.7 108 82.4
THA.LOC104821841 Tarenaya hassleriana HOM05D004512 ORTHO05D005355 9.5e-45 183.3 107 77.6
CANSAT80G1137 Cannabis sativa HOM05D004512 ORTHO05D005355 1.2e-44 183.0 100 81.0
CANSAT80G2616 Cannabis sativa HOM05D004512 ORTHO05D005355 1.2e-44 183.0 100 81.0
MD14G1226500 Malus domestica HOM05D004512 ORTHO05D005355 1.2e-44 183.0 103 80.6
Medtr6g084520 Medicago truncatula HOM05D004512 ORTHO05D005355 1.2e-44 183.0 97 81.4
HanXRQChr08g0226081 Helianthus annuus HOM05D004512 ORTHO05D005355 2.1e-44 182.2 98 84.7
MD06G1215900 Malus domestica HOM05D004512 ORTHO05D005355 2.1e-44 182.2 103 80.6
THA.LOC104820396 Tarenaya hassleriana HOM05D004512 ORTHO05D005355 2.1e-44 182.2 107 76.6
Sed0021676 Sechium edule HOM05D004512 ORTHO05D005355 2.8e-44 181.8 97 83.5
Lj2g0019547 Lotus japonicus HOM05D004512 ORTHO05D005355 6.2e-44 180.6 107 74.8
Nitab4.5_0006638g0020 Nicotiana tabacum HOM05D004512 ORTHO05D005355 6.2e-44 180.6 108 80.6
PGSC0003DMG400023110 Solanum tuberosum HOM05D004512 ORTHO05D005355 6.2e-44 180.6 108 79.6
Nitab4.5_0000208g0260 Nicotiana tabacum HOM05D004512 ORTHO05D005355 8.1e-44 180.3 108 79.6
Oeu046994.1 Olea europaea HOM05D004512 ORTHO05D005355 8.1e-44 180.3 102 81.4
PSO782G2824 Papaver somniferum HOM05D004512 ORTHO05D005355 8.1e-44 180.3 97 79.4
vmacro12793 Vaccinium macrocarpon HOM05D004512 ORTHO05D005355 1.8e-43 179.1 107 77.6
AL3G31700 Arabidopsis lyrata HOM05D004512 ORTHO05D005355 3.1e-43 178.3 107 74.8
BcaB04g20765 Brassica carinata HOM05D004512 ORTHO05D005355 5.2e-43 177.6 107 72.9
CARHR093770 Cardamine hirsuta HOM05D004512 ORTHO05D005355 5.2e-43 177.6 107 73.8
Peaxi162Scf00634g00116 Petunia axillaris HOM05D004512 ORTHO05D005355 5.2e-43 177.6 104 77.9
Sp1g36030 Schrenkiella parvula HOM05D004512 ORTHO05D005355 5.2e-43 177.6 107 74.8
MSTRG.22945 Avicennia marina HOM05D004512 ORTHO05D005355 6.8e-43 177.2 103 77.7
BraA01t03675Z Brassica rapa HOM05D004512 ORTHO05D005355 6.8e-43 177.2 107 72.9
BcaC09g48802 Brassica carinata HOM05D004512 ORTHO05D005355 8.9e-43 176.8 107 72.9
C01p45770 Brassica napus HOM05D004512 ORTHO05D005355 8.9e-43 176.8 107 72.9
BolC1t04540H Brassica oleracea HOM05D004512 ORTHO05D005355 8.9e-43 176.8 107 72.9
Sp3g16520 Schrenkiella parvula HOM05D004512 ORTHO05D005355 8.9e-43 176.8 107 73.8
Aqoxy3G00301 Aquilegia oxysepala HOM05D004512 ORTHO05D005355 1.2e-42 176.4 104 76.9
AT3G18410 Arabidopsis thaliana HOM05D004512 ORTHO05D005355 1.2e-42 176.4 107 73.8
Thhalv10011884m.g Eutrema salsugineum HOM05D004512 ORTHO05D005355 1.5e-42 176.0 107 73.8
BcaC01g03699 Brassica carinata HOM05D004512 ORTHO05D005355 2.0e-42 175.6 107 72.9
BolC3t17241H Brassica oleracea HOM05D004512 ORTHO05D005355 2.0e-42 175.6 107 72.9
CARHR039120 Cardamine hirsuta HOM05D004512 ORTHO05D005355 2.0e-42 175.6 107 72.9
RcHm_v2.0_Chr7g0185431 Rosa chinensis HOM05D004512 ORTHO05D005355 2.0e-42 175.6 101 78.2
TAR371G0608 Trochodendron aralioides HOM05D004512 ORTHO05D005355 2.0e-42 175.6 96 83.3
HPP92_020802 Vanilla planifolia HOM05D004512 ORTHO05D005355 2.0e-42 175.6 107 75.7
Carub.0003s1819 Capsella rubella HOM05D004512 ORTHO05D005355 2.6e-42 175.3 107 72.9
A03p40660 Brassica napus HOM05D004512 ORTHO05D005355 5.8e-42 174.1 107 72.0
BraA03t13222Z Brassica rapa HOM05D004512 ORTHO05D005355 5.8e-42 174.1 107 72.0
AL1G56000 Arabidopsis lyrata HOM05D004512 ORTHO05D005355 7.6e-42 173.7 107 74.8
Thhalv10022379m.g Eutrema salsugineum HOM05D004512 ORTHO05D005355 7.6e-42 173.7 106 72.6
Aa31LG8G5240 Aethionema arabicum HOM05D004512 ORTHO05D005355 9.9e-42 173.3 107 72.9
BcaB04g18985 Brassica carinata HOM05D004512 ORTHO05D005355 9.9e-42 173.3 107 71.0
Rhsim12G0143400 Rhododendron simsii HOM05D004512 ORTHO05D005355 9.9e-42 173.3 108 75.9
CSS0044395 Camellia sinensis var. sinensis HOM05D004512 ORTHO05D005355 1.3e-41 172.9 101 80.2
Migut.I00347 Erythranthe guttata HOM05D004512 ORTHO05D005355 1.3e-41 172.9 103 74.8
AT1G49140 Arabidopsis thaliana HOM05D004512 ORTHO05D005355 1.7e-41 172.6 107 74.8
BcaC05g28630 Brassica carinata HOM05D004512 ORTHO05D005355 1.7e-41 172.6 107 72.9
C05p47340 Brassica napus HOM05D004512 ORTHO05D005355 1.7e-41 172.6 107 72.9
BolC5t33461H Brassica oleracea HOM05D004512 ORTHO05D005355 1.7e-41 172.6 107 72.9
Carub.0001s3830 Capsella rubella HOM05D004512 ORTHO05D005355 1.7e-41 172.6 107 74.8
SGA_v2.0_scaffold25G10991 Striga asiatica HOM05D004512 ORTHO05D005355 2.2e-41 172.2 104 76.9
Aa31LG10G4840 Aethionema arabicum HOM05D004512 ORTHO05D005355 2.9e-41 171.8 101 76.2
CDE12G0498 Ceratophyllum demersum HOM05D004512 ORTHO05D005355 2.9e-41 171.8 101 80.2
Solyc12g036790.2 Solanum lycopersicum HOM05D004512 ORTHO05D005355 2.9e-41 171.8 97 83.5
CAN.G790.56 Capsicum annuum HOM05D004512 ORTHO05D005355 3.8e-41 171.4 97 81.4
BcaB06g25886 Brassica carinata HOM05D004512 ORTHO05D005355 4.9e-41 171.0 107 72.0
A05p31210 Brassica napus HOM05D004512 ORTHO05D005355 4.9e-41 171.0 107 72.0
BraA05t21962Z Brassica rapa HOM05D004512 ORTHO05D005355 4.9e-41 171.0 107 72.0
CAN.G121.2 Capsicum annuum HOM05D004512 ORTHO05D005355 4.9e-41 171.0 97 80.4
TWI81G1036 Tripterygium wilfordii HOM05D004512 ORTHO05D005355 4.9e-41 171.0 105 72.4
SalBow5G1005 Salvia bowleyana HOM05D004512 ORTHO05D005355 6.4e-41 170.6 102 74.5
SGA_v2.0_scaffold19G08815 Striga asiatica HOM05D004512 ORTHO05D005355 6.4e-41 170.6 107 75.7
FvH4_5g12140 Fragaria vesca HOM05D004512 ORTHO05D005355 3.2e-40 168.3 108 73.1
FAN04G1546 Fragaria x ananassa HOM05D004512 ORTHO05D005355 3.2e-40 168.3 108 73.1
FAN08G0397 Fragaria x ananassa HOM05D004512 ORTHO05D005355 3.2e-40 168.3 108 73.1
FAN13G2727 Fragaria x ananassa HOM05D004512 ORTHO05D005355 3.2e-40 168.3 108 73.1
FAN18G2044 Fragaria x ananassa HOM05D004512 ORTHO05D005355 3.2e-40 168.3 108 73.1
unitig_26.g9674 Utricularia gibba HOM05D004512 ORTHO05D005355 3.2e-40 168.3 103 74.8
A01p35940 Brassica napus HOM05D004512 ORTHO05D005355 9.2e-40 166.8 97 75.3
ATR1125G038 Amborella trichopoda HOM05D004512 ORTHO05D005355 2.7e-39 165.2 89 80.9
C03p49450 Brassica napus HOM05D004512 ORTHO05D005355 2.7e-39 165.2 97 75.3
Zm00001eb024750 Zea mays HOM05D004512 ORTHO05D005355 2.7e-39 165.2 93 76.3
Zm00001eb224900 Zea mays HOM05D004512 ORTHO05D005355 3.5e-39 164.9 93 76.3
unitig_749.g13425 Utricularia gibba HOM05D004512 ORTHO05D005355 1.3e-38 162.9 103 72.8
FAN18G1297 Fragaria x ananassa HOM05D004512 ORTHO05D005355 2.3e-38 162.2 98 74.5
COL.COLO4_05967 Corchorus olitorius HOM05D004512 ORTHO05D005355 3.6e-36 154.8 78 87.2
Nitab4.5_0007985g0060 Nicotiana tabacum HOM05D004512 ORTHO05D005355 1.4e-35 152.9 89 75.3
HanXRQChr16g0517341 Helianthus annuus HOM05D004512 ORTHO05D005355 1.3e-33 146.4 85 81.2
TWI60G0557 Tripterygium wilfordii HOM05D004512 ORTHO05D005355 3.8e-33 144.8 94 69.1
Nn3g17841 Nelumbo nucifera HOM05D004512 ORTHO05D005355 7.8e-31 137.1 68 86.8
AagrBONN_evm.TU.Sc2ySwM_117.17 Anthoceros agrestis HOM05D004512 ORTHO05D005355 2.0e-26 122.5 84 66.7
MD14G1197200 Malus domestica HOM05D004512 ORTHO05D005355 2.0e-26 122.5 74 78.4
AagrBONN_evm.TU.Sc2ySwM_228.463 Anthoceros agrestis HOM05D004512 ORTHO05D005355 3.4e-26 121.7 84 66.7
Mapoly0004s0055 Marchantia polymorpha HOM05D004512 ORTHO05D005355 9.9e-26 120.2 82 65.9
MD15G1306200 Malus domestica HOM05D004512 ORTHO05D005355 1.7e-25 119.4 74 73.0
Pp3c9_26150 Physcomitrium patens HOM05D004512 ORTHO05D005355 1.9e-24 115.9 82 64.6
CAN.G519.12 Capsicum annuum HOM05D004512 ORTHO05D005355 3.5e-23 111.7 72 70.8
CBR_g39222 Chara braunii HOM05D006171 ORTHO05D007294 1.0e-22 110.2 81 64.2
CAN.G133.16 Capsicum annuum HOM05D004512 ORTHO05D005355 1.3e-22 109.8 69 75.4
Prupe.2G045100 Prunus persica HOM05D004512 ORTHO05D005355 1.3e-22 109.8 66 75.8
SMO169G0039 Selaginella moellendorffii HOM05D004512 ORTHO05D005355 2.3e-22 109.0 81 56.8
Os10g0576000 Oryza sativa ssp. japonica HOM05D004512 ORTHO05D005355 3.7e-20 101.7 53 79.2
Prupe.1G218000 Prunus persica HOM05D004512 ORTHO05D005355 6.2e-20 100.9 102 52.9
MCO12G018 Micromonas commoda HOM05D004512 ORTHO05D005355 1.4e-16 89.7 93 45.2
BcaB02g11300 Brassica carinata HOM05D004512 ORTHO05D005355 1.0e-14 83.6 70 57.1
SEGI_01620 Sequoiadendron giganteum HOM05D004512 ORTHO05D005355 1.1e-13 80.1 47 78.7
Duzib084G0409 Durio zibethinus HOM05D004512 ORTHO05D005355 1.8e-11 72.8 54 64.8
PRCOL_00001312 Prasinoderma coloniale HOM05D004512 ORTHO05D005355 4.5e-10 68.2 93 37.6
Dinv09796 Davidia involucrata HOM05D004512 ORTHO05D005355 4.2e-08 61.6 37 81.1
Nitab4.5_0001194g0030 Nicotiana tabacum HOM05D004512 ORTHO05D005355 2.1e-07 59.3 58 58.6
Actinidia35087 Actinidia chinensis HOM05D004512 ORTHO05D005355 6.0e-07 57.8 30 86.7


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