Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc12g0007600 Simmondsia chinensis HOM05D002617 ORTHO05D006076 0.0e+00 1122.1 554 100.0
Cfa007960 Carpinus fangiana HOM05D002617 ORTHO05D009035 1.5e-133 480.7 573 51.1
Dinv34860 Davidia involucrata HOM05D002617 ORTHO05D006076 4.8e-132 475.7 587 49.2
Lj4A130T19 Lonicera japonica HOM05D002617 ORTHO05D006076 3.8e-129 466.1 566 48.9
GSVIVG01036455001 Vitis vinifera HOM05D002617 ORTHO05D009035 6.5e-129 465.3 569 50.1
EL10Ac5g11460 Beta vulgaris HOM05D002617 ORTHO05D006076 1.4e-128 464.2 548 51.3
Actinidia10244 Actinidia chinensis HOM05D002617 ORTHO05D006076 7.2e-128 461.8 551 50.3
Hma1.2p1_0550F.1_g177160 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 7.2e-128 461.8 576 49.0
TAR629G1560 Trochodendron aralioides HOM05D002617 ORTHO05D006076 1.2e-127 461.1 590 49.2
TWI74G0354 Tripterygium wilfordii HOM05D002617 ORTHO05D006076 2.1e-127 460.3 583 48.5
Ciclev10013582m.g Citrus clementina HOM05D002617 ORTHO05D009035 3.0e-126 456.4 562 49.1
CiPaw.03G005500 Carya illinoinensis HOM05D002617 ORTHO05D006076 2.0e-125 453.8 524 51.9
Glyma.13G047700 Glycine max HOM05D002617 ORTHO05D006076 9.7e-125 451.4 511 52.3
TAR371G0417 Trochodendron aralioides HOM05D002617 ORTHO05D006076 3.7e-124 449.5 549 50.8
MSTRG.23826 Avicennia marina HOM05D002617 ORTHO05D006076 4.1e-123 446.0 530 50.0
RcHm_v2.0_Chr2g0163421 Rosa chinensis HOM05D002617 ORTHO05D006076 4.1e-123 446.0 587 48.6
Cc07_g05010 Coffea canephora HOM05D002617 ORTHO05D006076 5.3e-123 445.7 539 48.1
Thecc.04G140400 Theobroma cacao HOM05D002617 ORTHO05D006076 1.2e-122 444.5 594 46.5
MD17G1073100 Malus domestica HOM05D002617 ORTHO05D006076 5.9e-122 442.2 554 50.0
Prupe.3G241000 Prunus persica HOM05D002617 ORTHO05D006076 7.7e-122 441.8 559 48.7
DCAR_026269 Daucus carota HOM05D002617 ORTHO05D006076 2.2e-121 440.3 588 46.3
AUR62029876 Chenopodium quinoa HOM05D002617 ORTHO05D006076 1.5e-120 437.6 433 56.8
Peaxi162Scf00479g00121 Petunia axillaris HOM05D002617 ORTHO05D006076 1.9e-120 437.2 534 48.3
Oeu032874.2 Olea europaea HOM05D002617 ORTHO05D006076 9.4e-120 434.9 544 49.1
Potri.017G111300 Populus trichocarpa HOM05D002617 ORTHO05D006076 9.4e-120 434.9 621 46.2
Haze_14109 Corylus avellana HOM05D002617 ORTHO05D006076 1.2e-119 434.5 649 43.5
Duzib177G0627 Durio zibethinus HOM05D002617 ORTHO05D006076 3.6e-119 433.0 573 47.5
Nitab4.5_0003461g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 6.1e-119 432.2 545 47.3
Manes.02G066000 Manihot esculenta HOM05D002617 ORTHO05D006076 8.0e-119 431.8 524 50.0
QL02p053118 Quercus lobata HOM05D002617 ORTHO05D006076 1.4e-118 431.0 561 48.7
Cpa.g.sc179.38 Carica papaya HOM05D002617 ORTHO05D006076 1.8e-118 430.6 579 48.2
COL.COLO4_16207 Corchorus olitorius HOM05D002617 ORTHO05D006076 6.8e-118 428.7 599 46.1
Migut.H00535 Erythranthe guttata HOM05D002617 ORTHO05D009035 8.8e-118 428.3 546 46.5
AUR62025837 Chenopodium quinoa HOM05D002617 ORTHO05D006076 1.5e-117 427.6 444 54.5
Atru.chr8.797 Acer truncatum HOM05D002617 ORTHO05D006076 2.6e-117 426.8 579 47.3
arahy.Tifrunner.gnm1.ann1.B4TVCG Arachis hypogaea HOM05D002617 ORTHO05D006076 5.7e-117 425.6 481 53.2
Rhsim07G0215800 Rhododendron simsii HOM05D002617 ORTHO05D006076 1.3e-116 424.5 597 46.7
CANSAT64G0391 Cannabis sativa HOM05D002617 ORTHO05D006076 2.8e-116 423.3 538 48.9
arahy.Tifrunner.gnm1.ann1.LH188B Arachis hypogaea HOM05D002617 ORTHO05D006076 3.7e-116 422.9 479 53.4
VMungo0540G1549 Vigna mungo HOM05D002617 ORTHO05D006076 3.7e-116 422.9 446 54.7
MD09G1082600 Malus domestica HOM05D002617 ORTHO05D006076 8.3e-116 421.8 529 49.9
Potri.004G104400 Populus trichocarpa HOM05D002617 ORTHO05D006076 8.3e-116 421.8 462 52.6
Sabra04G0077200 Salix brachista HOM05D002617 ORTHO05D006076 1.1e-115 421.4 450 52.7
Duzib235G0774 Durio zibethinus HOM05D002617 ORTHO05D006076 1.4e-115 421.0 608 45.6
CAN.G153.18 Capsicum annuum HOM05D002617 ORTHO05D006076 1.2e-114 417.9 442 51.1
Sopen03g009500 Solanum pennellii HOM05D002617 ORTHO05D000002 1.6e-114 417.5 539 46.6
Phvul.L003037 Phaseolus vulgaris HOM05D002617 ORTHO05D006076 4.5e-114 416.0 473 53.1
Lalb_Chr02g0158361 Lupinus albus HOM05D002617 ORTHO05D006076 1.0e-113 414.8 518 48.3
FAN14G4630 Fragaria x ananassa HOM05D002617 ORTHO05D006076 2.2e-113 413.7 578 47.4
Lj2g0025982 Lotus japonicus HOM05D002617 ORTHO05D006076 5.0e-113 412.5 403 56.6
Hma1.2p1_0136F.1_g062020 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 6.5e-113 412.1 430 53.5
Glyma.19G040800 Glycine max HOM05D002617 ORTHO05D006076 8.5e-113 411.8 475 50.5
ClCG11G005280 Citrullus lanatus HOM05D002617 ORTHO05D006076 1.9e-112 410.6 541 47.7
Actinidia19593 Actinidia chinensis HOM05D002617 ORTHO05D006076 3.2e-112 409.8 451 52.5
MELO3C022066.2 Cucumis melo HOM05D002617 ORTHO05D006076 5.5e-112 409.1 548 48.4
FvH4_6g45480 Fragaria vesca HOM05D002617 ORTHO05D006076 1.6e-111 407.5 585 46.5
FAN02G4200 Fragaria x ananassa HOM05D002617 ORTHO05D006076 6.1e-111 405.6 616 45.5
CsaV3_5G039050 Cucumis sativus L. HOM05D002617 ORTHO05D006076 1.0e-110 404.8 548 48.2
Nitab4.5_0004487g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 1.0e-110 404.8 540 46.1
Solyc03g045060.3 Solanum lycopersicum HOM05D002617 ORTHO05D006076 1.0e-110 404.8 539 45.8
Gohir.A13G161700 Gossypium hirsutum HOM05D002617 ORTHO05D006076 2.3e-110 403.7 582 46.6
Gohir.D13G172300 Gossypium hirsutum HOM05D002617 ORTHO05D006076 2.3e-110 403.7 582 46.7
Gorai.013G188400 Gossypium raimondii HOM05D002617 ORTHO05D006076 2.3e-110 403.7 582 46.7
HanXRQChr14g0439661 Helianthus annuus HOM05D002617 ORTHO05D006076 1.2e-109 401.4 583 44.4
Medtr6g016990 Medicago truncatula HOM05D002617 ORTHO05D006076 1.3e-108 397.9 500 49.0
Aqoxy3G00424 Aquilegia oxysepala HOM05D002617 ORTHO05D006076 2.2e-108 397.1 507 48.5
Psat0s1160g0440 Pisum sativum HOM05D002617 ORTHO05D006076 2.8e-108 396.7 509 47.0
Sabra17G0092600 Salix brachista HOM05D002617 ORTHO05D006076 4.8e-108 396.0 492 48.4
Ca_26958_v3 Cicer arietinum L. HOM05D002617 ORTHO05D006076 1.1e-107 394.8 511 46.4
HanXRQChr15g0489371 Helianthus annuus HOM05D002617 ORTHO05D006076 1.4e-107 394.4 380 54.5
Sed0011770 Sechium edule HOM05D002617 ORTHO05D006076 1.4e-107 394.4 523 47.8
Haze_14111 Corylus avellana HOM05D002617 ORTHO05D006076 7.0e-107 392.1 726 38.6
Lalb_Chr21g0317971 Lupinus albus HOM05D002617 ORTHO05D006076 7.0e-107 392.1 460 51.5
Eucgr.J01460 Eucalyptus grandis HOM05D002617 ORTHO05D006076 1.2e-106 391.3 537 46.4
ECA232G1923 Erigeron canadensis HOM05D002617 ORTHO05D006076 3.5e-106 389.8 528 45.6
Sp7g03340 Schrenkiella parvula HOM05D002617 ORTHO05D006076 1.1e-104 384.8 512 46.7
TPR.G9686 Trifolium pratense HOM05D002617 ORTHO05D006076 5.2e-102 375.9 454 48.9
Carub.0007s3725 Capsella rubella HOM05D002617 ORTHO05D006076 4.4e-101 372.9 517 47.4
THA.LOC104805556 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 5.7e-101 372.5 515 46.6
GSVIVG01011977001 Vitis vinifera HOM05D002617 ORTHO05D006076 5.7e-101 372.5 325 60.3
BcaB02g08001 Brassica carinata HOM05D002617 ORTHO05D006076 1.7e-100 370.9 516 45.9
Oeu043861.1 Olea europaea HOM05D002617 ORTHO05D006076 2.2e-100 370.5 636 40.4
Thhalv10027714m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 8.3e-100 368.6 509 46.2
AL7G51930 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 1.8e-99 367.5 512 45.9
AL2G25720 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 3.2e-99 366.7 424 50.9
AT5G38600 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 3.2e-99 366.7 512 45.9
THA.LOC104822697 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 4.1e-99 366.3 541 42.9
BcaC08g44397 Brassica carinata HOM05D002617 ORTHO05D006076 7.0e-99 365.5 410 52.0
Aa31LG9G16990 Aethionema arabicum HOM05D002617 ORTHO05D006076 1.6e-98 364.4 428 51.4
Carub.0002s1348 Capsella rubella HOM05D002617 ORTHO05D006076 2.0e-98 364.0 460 48.7
C06p18260 Brassica napus HOM05D000054 ORTHO05D006076 2.7e-98 363.6 388 52.8
BolC6t37041H Brassica oleracea HOM05D002617 ORTHO05D006076 3.5e-98 363.2 388 52.8
A07p19790 Brassica napus HOM05D002617 ORTHO05D006076 1.0e-97 361.7 412 50.2
BraA07t29680Z Brassica rapa HOM05D002617 ORTHO05D006076 1.0e-97 361.7 412 50.2
SGA_v2.0_scaffold204G41654 Striga asiatica HOM05D002617 ORTHO05D006076 1.7e-97 360.9 550 43.8
Lsat_1_v5_gn_4_175880 Lactuca sativa HOM05D002617 ORTHO05D006076 4.3e-96 356.3 487 45.0
AT1G67210 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 2.8e-95 353.6 388 52.6
unitig_736.g22255 Utricularia gibba HOM05D002617 ORTHO05D006076 2.8e-95 353.6 395 48.1
ATR0598G067 Amborella trichopoda HOM05D002617 ORTHO05D006076 1.2e-93 348.2 474 46.2
BcaC03g14816 Brassica carinata HOM05D002617 ORTHO05D006076 1.7e-92 344.4 466 47.9
BolC2t08421H Brassica oleracea HOM05D002617 ORTHO05D006076 1.7e-92 344.4 466 47.9
PSO478G3319 Papaver somniferum HOM05D002617 ORTHO05D006076 3.7e-92 343.2 396 49.2
A02p14070 Brassica napus HOM05D002617 ORTHO05D006076 6.4e-92 342.4 462 46.8
CARHR214050 Cardamine hirsuta HOM05D002617 ORTHO05D006076 6.4e-92 342.4 451 47.0
EL10Ac6g14526 Beta vulgaris HOM05D002617 ORTHO05D006076 8.3e-92 342.0 331 53.8
C02p22680 Brassica napus HOM05D002617 ORTHO05D006076 8.3e-92 342.0 467 47.5
BcaB05g24247 Brassica carinata HOM05D002617 ORTHO05D006076 3.2e-91 340.1 453 47.2
BraA02t06470Z Brassica rapa HOM05D002617 ORTHO05D006076 4.1e-91 339.7 467 46.3
Sp5g22140 Schrenkiella parvula HOM05D002617 ORTHO05D006076 4.1e-91 339.7 364 52.5
CARHR059670 Cardamine hirsuta HOM05D002617 ORTHO05D006076 5.4e-91 339.3 475 46.7
PGR042G0381 Punica granatum HOM05D002617 ORTHO05D006076 3.5e-90 336.7 567 41.3
PSO017G2525 Papaver somniferum HOM05D002617 ORTHO05D006076 3.0e-89 333.6 422 45.3
Aa31LG2G3590 Aethionema arabicum HOM05D002617 ORTHO05D006076 1.5e-88 331.3 462 45.2
HPP92_011591 Vanilla planifolia HOM05D002617 ORTHO05D006076 8.0e-87 325.5 375 50.1
Thhalv10018682m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 1.8e-86 324.3 352 52.0
AUR62007748 Chenopodium quinoa HOM05D002617 ORTHO05D006076 3.1e-86 323.6 368 49.7
Hund05776 Selenicereus undatus HOM05D002617 ORTHO05D006076 6.8e-86 322.4 459 45.1
FAN05G1346 Fragaria x ananassa HOM05D002617 ORTHO05D006076 2.6e-85 320.5 387 49.1
DCAR_026709 Daucus carota HOM05D002617 ORTHO05D006076 4.4e-85 319.7 484 44.6
Os06g0495700 Oryza sativa ssp. japonica HOM05D002617 ORTHO05D006076 1.4e-83 314.7 468 44.4
Sc11g0002970 Simmondsia chinensis HOM05D002617 ORTHO05D006076 1.9e-83 314.3 390 46.2
vmacro04611 Vaccinium macrocarpon HOM05D002617 ORTHO05D006076 4.1e-83 313.2 598 39.8
Zm00001eb182330 Zea mays HOM05D002617 ORTHO05D006076 3.0e-81 307.0 507 42.8
AUR62002941 Chenopodium quinoa HOM05D002617 ORTHO05D006076 5.1e-81 306.2 351 49.6
Ah.03g138020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 4.3e-80 303.1 356 49.2
Actinidia29638 Actinidia chinensis HOM05D002617 ORTHO05D006076 9.5e-80 302.0 354 50.0
Actinidia13004 Actinidia chinensis HOM05D002617 ORTHO05D006076 2.0e-77 294.3 350 50.6
FAN09G0965 Fragaria x ananassa HOM05D002617 ORTHO05D006076 8.3e-76 288.9 351 49.0
CSS0005448 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 9.3e-67 258.8 276 55.1
Lsat_1_v5_gn_8_37540 Lactuca sativa HOM05D002617 ORTHO05D006076 5.1e-65 253.1 287 49.8
CDE03G0434 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 5.6e-64 249.6 282 52.8
Dinv33921 Davidia involucrata HOM05D002617 ORTHO05D009035 7.3e-64 249.2 251 55.8
CSS0031641 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 3.1e-62 243.8 235 59.1
SMO005G0008 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 1.3e-60 238.4 365 41.4
Mapoly0126s0021 Marchantia polymorpha HOM05D002617 ORTHO05D006076 4.2e-59 233.4 295 44.1
Lj3A1022T61 Lonicera japonica HOM05D002617 ORTHO05D006076 7.9e-50 202.6 184 60.3
SMO197G0066 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 1.3e-47 195.3 274 43.8
Ah.02g115020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 5.8e-45 186.4 443 35.2
SGA_v2.0_scaffold150G36614 Striga asiatica HOM05D002617 ORTHO05D006076 1.3e-39 168.7 496 31.5
Nn8g40574 Nelumbo nucifera HOM05D002617 ORTHO05D006076 4.8e-39 166.8 286 39.2
CBR_g21963 Chara braunii HOM05D002617 ORTHO05D006076 3.1e-38 164.1 391 33.5
Dinv33922 Davidia involucrata HOM05D002617 ORTHO05D006076 2.5e-32 144.4 239 45.2
Glyma.19G043901 Glycine max HOM05D002617 ORTHO05D006076 6.3e-31 139.8 241 44.4
AagrBONN_evm.TU.Sc2ySwM_344.4970 Anthoceros agrestis HOM05D002617 ORTHO05D006076 1.0e-28 132.5 212 37.7
SalBow1G4795 Salvia bowleyana HOM05D002617 ORTHO05D006076 1.2e-26 125.6 222 38.7
CDE04G2372 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 2.3e-25 121.3 109 52.3
Pp3c8_12390 Physcomitrium patens HOM05D002617 ORTHO05D006076 1.3e-23 115.5 320 30.0
PGSC0003DMG400003361 Solanum tuberosum HOM05D002617 ORTHO05D006076 1.2e-21 109.0 176 43.2
CSS0013506 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 1.4e-19 102.1 209 35.4
SEGI_27964 Sequoiadendron giganteum HOM05D002617 ORTHO05D006076 2.0e-08 65.1 71 46.5
CDE03G0290 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 1.7e-07 62.0 153 35.3
Actinidia19277 Actinidia chinensis HOM05D002617 ORTHO05D006076 8.2e-07 59.7 38 68.4
Lsat_1_v5_gn_8_136421 Lactuca sativa HOM05D002617 ORTHO05D048373 1.1e-06 59.3 53 50.9


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