Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Sc12g0007400 Simmondsia chinensis HOM05D007058 ORTHO05D009036 3.4e-253 877.9 449 100.0
Dinv12229 Davidia involucrata HOM05D007058 ORTHO05D009036 7.3e-163 577.8 450 66.9
Hund02350 Selenicereus undatus HOM05D007058 ORTHO05D009036 1.2e-162 577.0 426 68.5
EL10Ac5g11484 Beta vulgaris HOM05D007058 ORTHO05D009036 8.1e-162 574.3 436 68.6
AUR62033787 Chenopodium quinoa HOM05D007058 ORTHO05D009036 4.4e-160 568.5 445 67.0
Hma1.2p1_2594F.1_g325085 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 2.2e-159 566.2 448 64.7
Hma1.2p1_1614F.1_g293670 Hydrangea macrophylla HOM05D007058 ORTHO05D009036 1.7e-156 556.6 443 64.3
GSVIVG01008345001 Vitis vinifera HOM05D007058 ORTHO05D009036 2.2e-151 539.7 435 65.7
QL10p026796 Quercus lobata HOM05D007058 ORTHO05D009036 5.4e-150 535.0 435 63.7
Actinidia02670 Actinidia chinensis HOM05D007058 ORTHO05D009036 2.3e-148 529.6 459 62.5
Manes.01G015400 Manihot esculenta HOM05D007058 ORTHO05D009036 5.6e-147 525.0 455 63.1
Thecc.03G043100 Theobroma cacao HOM05D007058 ORTHO05D009036 1.6e-146 523.5 446 62.8
TAR629G3445 Trochodendron aralioides HOM05D007058 ORTHO05D009036 3.6e-146 522.3 435 61.6
Lj9A424T33 Lonicera japonica HOM05D007058 ORTHO05D009036 3.1e-145 519.2 454 62.1
TAR535G0005 Trochodendron aralioides HOM05D007058 ORTHO05D009036 3.4e-144 515.8 386 66.3
FAN08G1503 Fragaria x ananassa HOM05D007058 ORTHO05D009036 5.8e-144 515.0 379 68.6
FAN18G2897 Fragaria x ananassa HOM05D007058 ORTHO05D009036 5.8e-144 515.0 379 68.6
Duzib205G0828 Durio zibethinus HOM05D007058 ORTHO05D009036 9.9e-144 514.2 420 63.6
FAN04G2101 Fragaria x ananassa HOM05D007058 ORTHO05D009036 1.3e-143 513.8 379 68.9
FAN13G1457 Fragaria x ananassa HOM05D007058 ORTHO05D009036 1.1e-142 510.8 379 68.1
Ciclev10020201m.g Citrus clementina HOM05D007058 ORTHO05D009036 1.9e-142 510.0 372 68.8
Gohir.A07G059500 Gossypium hirsutum HOM05D007058 ORTHO05D009036 1.9e-142 510.0 442 62.9
PGR044G0638 Punica granatum HOM05D007058 ORTHO05D009036 1.9e-142 510.0 377 68.7
Cc04_g06820 Coffea canephora HOM05D007058 ORTHO05D009036 4.2e-142 508.8 406 65.5
COL.COLO4_38517 Corchorus olitorius HOM05D007058 ORTHO05D009036 9.3e-142 507.7 452 61.1
Sed0017039 Sechium edule HOM05D007058 ORTHO05D009036 2.7e-141 506.1 443 60.7
Nitab4.5_0006894g0050 Nicotiana tabacum HOM05D007058 ORTHO05D009036 3.5e-141 505.8 408 63.7
Cpa.g.sc3.458 Carica papaya HOM05D007058 ORTHO05D009036 6.0e-141 505.0 427 62.5
Nn3g17960 Nelumbo nucifera HOM05D007058 ORTHO05D009036 6.0e-141 505.0 436 61.7
Sabra12G0037400 Salix brachista HOM05D007058 ORTHO05D009036 7.8e-141 504.6 379 66.0
Potri.012G053600 Populus trichocarpa HOM05D007058 ORTHO05D009036 1.0e-140 504.2 417 61.9
MELO3C002112.2 Cucumis melo HOM05D007058 ORTHO05D009036 1.3e-140 503.8 451 59.0
Prupe.5G225300 Prunus persica HOM05D007058 ORTHO05D009036 1.3e-140 503.8 448 60.5
RcHm_v2.0_Chr7g0179381 Rosa chinensis HOM05D007058 ORTHO05D009036 1.7e-140 503.4 383 66.3
PSO063G1254 Papaver somniferum HOM05D007058 ORTHO05D009036 2.3e-140 503.1 377 65.5
CsaV3_1G006960 Cucumis sativus L. HOM05D007058 ORTHO05D009036 3.9e-140 502.3 449 58.8
Nitab4.5_0001456g0070 Nicotiana tabacum HOM05D007058 ORTHO05D009036 6.6e-140 501.5 408 63.0
MD06G1220900 Malus domestica HOM05D007058 ORTHO05D009036 3.3e-139 499.2 444 60.4
TWI60G0394 Tripterygium wilfordii HOM05D007058 ORTHO05D009036 4.3e-139 498.8 416 63.0
Atru.chr9.916 Acer truncatum HOM05D007058 ORTHO05D009036 1.6e-138 496.9 384 66.9
CANSAT80G0903 Cannabis sativa HOM05D007058 ORTHO05D009036 3.6e-138 495.7 457 58.6
PSO782G5502 Papaver somniferum HOM05D007058 ORTHO05D009036 3.6e-138 495.7 377 64.5
Peaxi162Scf00683g00337 Petunia axillaris HOM05D007058 ORTHO05D009036 1.1e-137 494.2 405 62.5
TAR371G0970 Trochodendron aralioides HOM05D007058 ORTHO05D009036 1.1e-137 494.2 446 59.2
Aqoxy3G04055 Aquilegia oxysepala HOM05D007058 ORTHO05D009036 3.1e-137 492.7 442 60.0
PGSC0003DMG400005667 Solanum tuberosum HOM05D007058 ORTHO05D009036 1.2e-136 490.7 414 61.1
ClCG04G010870 Citrullus lanatus HOM05D007058 ORTHO05D009036 4.5e-136 488.8 424 60.1
Sopen03g037810 Solanum pennellii HOM05D007058 ORTHO05D009036 6.4e-135 485.0 414 60.4
Solyc03g118860.3 Solanum lycopersicum HOM05D007058 ORTHO05D009036 8.4e-135 484.6 414 60.1
MBI16_g25105_MAGBIO Magnolia biondii HOM05D007058 ORTHO05D009036 7.1e-134 481.5 403 60.8
arahy.Tifrunner.gnm1.ann1.LC4GJT Arachis hypogaea HOM05D007058 ORTHO05D009036 8.7e-132 474.6 395 61.0
MD14G1230300 Malus domestica HOM05D007058 ORTHO05D009036 1.1e-131 474.2 449 57.7
arahy.Tifrunner.gnm1.ann1.8NC01M Arachis hypogaea HOM05D007058 ORTHO05D009036 5.6e-131 471.9 385 61.8
CAN.G1129.46 Capsicum annuum HOM05D007058 ORTHO05D009036 4.8e-130 468.8 395 62.0
Eucgr.K02237 Eucalyptus grandis HOM05D007058 ORTHO05D009036 1.8e-129 466.8 349 67.9
Haze_18744 Corylus avellana HOM05D007058 ORTHO05D009036 2.4e-129 466.5 436 59.2
Migut.I00419 Erythranthe guttata HOM05D007058 ORTHO05D009036 3.4e-128 462.6 389 62.5
THA.LOC104813907 Tarenaya hassleriana HOM05D007058 ORTHO05D009036 3.4e-128 462.6 426 58.0
AUR62029919 Chenopodium quinoa HOM05D007058 ORTHO05D009036 4.9e-127 458.8 365 65.8
ATR0681G321 Amborella trichopoda HOM05D007058 ORTHO05D009036 2.5e-123 446.4 400 57.0
HPP92_023400 Vanilla planifolia HOM05D007058 ORTHO05D009036 5.8e-120 435.3 422 53.1
Lj4g0007182 Lotus japonicus HOM05D007058 ORTHO05D009036 8.4e-119 431.4 378 59.0
CARHR066810 Cardamine hirsuta HOM05D007058 ORTHO05D009036 1.1e-118 431.0 432 54.6
Thhalv10018574m.g Eutrema salsugineum HOM05D007058 ORTHO05D009036 9.3e-118 427.9 433 52.9
VMungo0251G0619 Vigna mungo HOM05D007058 ORTHO05D009036 9.3e-118 427.9 390 58.2
BraA07t31509Z Brassica rapa HOM05D007058 ORTHO05D009036 1.8e-116 423.7 434 53.0
C06p47890 Brassica napus HOM05D007058 ORTHO05D009036 3.9e-116 422.5 440 53.4
BolC6t39824H Brassica oleracea HOM05D007058 ORTHO05D009036 3.9e-116 422.5 440 53.4
A07p39600 Brassica napus HOM05D007058 ORTHO05D009036 5.1e-116 422.2 434 53.2
BcaB03g15080 Brassica carinata HOM05D007058 ORTHO05D009036 5.7e-115 418.7 377 57.6
Carub.0002s2049 Capsella rubella HOM05D007058 ORTHO05D009036 9.7e-115 417.9 376 56.9
Sp5g28930 Schrenkiella parvula HOM05D007058 ORTHO05D009036 9.7e-115 417.9 443 51.7
Aa31LG4G4070 Aethionema arabicum HOM05D007058 ORTHO05D009036 2.8e-114 416.4 431 51.7
AL2G33550 Arabidopsis lyrata HOM05D007058 ORTHO05D009036 3.1e-113 412.9 436 51.4
Oeu017513.1 Olea europaea HOM05D007058 ORTHO05D009036 4.1e-113 412.5 345 64.1
AT1G73740 Arabidopsis thaliana HOM05D007058 ORTHO05D009036 7.7e-112 408.3 435 50.6
Gorai.001G067900 Gossypium raimondii HOM05D007058 ORTHO05D009036 2.9e-111 406.4 365 60.5
Phvul.002G325300 Phaseolus vulgaris HOM05D007058 ORTHO05D009036 5.9e-104 382.1 375 54.1
HPP92_027335 Vanilla planifolia HOM05D007058 ORTHO05D009036 4.8e-98 362.5 384 50.5
HPP92_017197 Vanilla planifolia HOM05D007058 ORTHO05D009036 4.1e-97 359.4 384 50.3
Mapoly0014s0012 Marchantia polymorpha HOM05D007058 ORTHO05D009036 1.6e-93 347.4 381 47.2
FvH4_5g16720 Fragaria vesca HOM05D007058 ORTHO05D009036 4.7e-93 345.9 258 65.5
SMO271G0182 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 3.3e-91 339.7 390 48.2
Rhsim08G0129700 Rhododendron simsii HOM05D007058 ORTHO05D009036 1.7e-90 337.4 282 62.8
Glyma.05G242000 Glycine max HOM05D007058 ORTHO05D009036 2.9e-87 326.6 293 56.0
Mapoly0014s0018 Marchantia polymorpha HOM05D007058 ORTHO05D009036 1.4e-84 317.8 347 47.6
Pp3c1_26880 Physcomitrium patens HOM05D007058 ORTHO05D009036 8.8e-84 315.1 371 44.5
SMO308G0041 Selaginella moellendorffii HOM05D007058 ORTHO05D009036 2.6e-83 313.5 426 43.7
AagrBONN_evm.TU.Sc2ySwM_228.2408 Anthoceros agrestis HOM05D007058 ORTHO05D009036 6.8e-76 288.9 310 51.3
Gohir.D07G064300 Gossypium hirsutum HOM05D007058 ORTHO05D009036 3.7e-66 256.5 259 53.3
Os01g0516700 Oryza sativa ssp. japonica HOM05D007058 ORTHO05D009036 4.5e-64 249.6 303 46.9
MCO02G081 Micromonas commoda HOM05D007058 ORTHO05D009036 1.6e-61 241.1 404 36.6
PRCOL_00000956 Prasinoderma coloniale HOM05D007058 ORTHO05D009036 2.4e-57 227.3 395 39.0
CBR_g74658 Chara braunii HOM05D007058 ORTHO05D009036 7.5e-51 205.7 590 27.6
Glyma.08G049500 Glycine max HOM05D007058 ORTHO05D009036 7.8e-48 195.7 191 52.4
Glyma.08G049450 Glycine max HOM05D007058 ORTHO05D009036 3.0e-39 167.2 116 68.1
Zm00001eb132130 Zea mays HOM05D007058 ORTHO05D009036 4.3e-38 163.3 248 39.1
arahy.Tifrunner.gnm1.ann1.4SU3WD Arachis hypogaea HOM05D007058 ORTHO05D009036 2.6e-35 154.1 135 55.6
CAN.G1074.8 Capsicum annuum HOM05D007058 ORTHO05D009036 1.2e-32 145.2 129 54.3
SalBow5G0499 Salvia bowleyana HOM05D007058 ORTHO05D010040 6.2e-29 132.9 135 53.3
AUR62029918 Chenopodium quinoa HOM05D007058 ORTHO05D009036 5.4e-25 119.8 81 74.1
Cre12.g527950 Chlamydomonas reinhardtii HOM05D007058 ORTHO05D009036 7.1e-25 119.4 392 27.6
Ah.11g045170 Amaranthus hybridus HOM05D007058 ORTHO05D009036 2.7e-24 117.5 84 73.8
CAN.G169.6 Capsicum annuum HOM05D007058 ORTHO05D009036 6.6e-23 112.8 119 51.3
Gorai.001G067800 Gossypium raimondii HOM05D007058 ORTHO05D009036 5.6e-22 109.8 80 72.5
SEGI_28231 Sequoiadendron giganteum HOM05D007058 ORTHO05D009036 2.4e-20 104.4 78 66.7
BcaC08g46795 Brassica carinata HOM05D007058 ORTHO05D009036 9.3e-17 92.4 98 51.0
Gohir.D07G064250 Gossypium hirsutum HOM05D007058 ORTHO05D009036 4.3e-14 83.6 61 73.8
CAN.G507.4 Capsicum annuum HOM05D006747 ORTHO05D008384 1.4e-12 78.6 76 47.4
Rhsim08G0129900 Rhododendron simsii HOM05D007058 ORTHO05D009036 5.3e-12 76.6 46 80.4
arahy.Tifrunner.gnm1.ann1.MMR300 Arachis hypogaea HOM05D007058 ORTHO05D009036 3.4e-11 73.9 66 59.1
Rhsim08G0129800 Rhododendron simsii HOM05D007058 ORTHO05D021411 8.4e-10 69.3 43 81.4
Ah.07g197460 Amaranthus hybridus HOM05D006578 ORTHO05D008100 5.5e-09 66.6 45 68.9
CAN.G46.28 Capsicum annuum HOM05D001997 ORTHO05D004620 2.5e-06 57.8 37 73.0
CAN.G1376.1 Capsicum annuum HOM05D004980 ORTHO05D021411 4.3e-06 57.0 148 31.1
CAN.G1014.20 Capsicum annuum HOM05D007058 ORTHO05D021411 7.4e-06 56.2 37 75.7


User provided reference genes

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